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(-) Description

Title :  NEMATOCYST OUTER WALL ANTIGEN, CYSTEINE RICH DOMAIN NW1
 
Authors :  S. Meier, P. R. Jensen, S. Grzesiek, S. Oezbek
Date :  11 Jul 06  (Deposition) - 06 Feb 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Disulfide, Evolution, Cysteine Rich, Nematocyst, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Meier, P. R. Jensen, P. Adamczyk, H. P. Bachinger, T. W. Holstein, J. Engel, S. Ozbek, S. Grzesiek
Sequence-Structure And Structure-Function Analysis In Cysteine-Rich Domains Forming The Ultrastable Nematocyst Wall.
J. Mol. Biol. V. 368 718 2007
PubMed-ID: 17362991  |  Reference-DOI: 10.1016/J.JMB.2007.02.026
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - NEMATOCYST OUTER WALL ANTIGEN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: FIRST CYSTEINE RICH DOMAIN
    Organism Scientific: HYDRA VULGARIS
    Organism Taxid: 6087

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2HM3)

(-) Sites  (0, 0)

(no "Site" information available for 2HM3)

(-) SS Bonds  (3, 3)

NMR Structure
No.Residues
1A:8 -A:20
2A:12 -A:25
3A:16 -A:24

(-) Cis Peptide Bonds  (1, 10)

NMR Structure
No.ModelResidues
11, 2, 3, 4, 5, 6, 7, 8, 9, 10Tyr A:17 -Pro A:18

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2HM3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2HM3)

(-) Exons   (0, 0)

(no "Exon" information available for 2HM3)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:25
 aligned with Q8IT70_HYDVU | Q8IT70 from UniProtKB/TrEMBL  Length:774

    Alignment length:25
                                   477       487     
         Q8IT70_HYDVU   468 TCPSGCSGDCYPECKPGCCGQVNLN 492
               SCOP domains ------------------------- SCOP domains
               CATH domains ------------------------- CATH domains
               Pfam domains ------------------------- Pfam domains
         Sec.struct. author ......hhhhh...hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------- SAPs(SNPs)
                    PROSITE ------------------------- PROSITE
                 Transcript ------------------------- Transcript
                 2hm3 A   7 TCPSGCSGDCYPECKPGCCGQVNLN  31
                                    16        26
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2HM3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2HM3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2HM3)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
    (no "Gene Ontology" information available for 2HM3)

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  Cis Peptide Bonds
    Tyr A:17 - Pro A:18   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8IT70_HYDVU | Q8IT70: 2hm4 2hm5 2hm6 2nx6 2nx7

(-) Related Entries Specified in the PDB File

2hm4