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(-) Description

Title :  SOLUTION STRUCTURE OF A PROTEASOME RELATED SUBUNIT N TERMINAL DOMAIN
 
Authors :  Y. Wu, Y. Hu, C. Jin
Date :  30 Jun 14  (Deposition) - 04 Feb 15  (Release) - 12 Apr 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  A-Helix Bundle, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Hu, Y. Wu, Q. Li, W. Zhang, C. Jin
Solution Structure Of Yeast Rpn9: Insights Into Proteasome Lid Assembly.
J. Biol. Chem. V. 290 6878 2015
PubMed-ID: 25631053  |  Reference-DOI: 10.1074/JBC.M114.626762

(-) Compounds

Molecule 1 - 26S PROTEASOME REGULATORY SUBUNIT RPN9
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET28A
    Expression System Vector Type: VECTOR
    Fragment: N TERMINAL DOMAIN, UNP RESIDUES 1-160
    Gene: D9461.14, NAS7, RPN9, YDR427W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE S288C
    Organism Taxid: 559292
    Synonym: PROTEASOME NON-ATPASE SUBUNIT 7

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2MQW)

(-) Sites  (0, 0)

(no "Site" information available for 2MQW)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2MQW)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2MQW)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2MQW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2MQW)

(-) Exons   (0, 0)

(no "Exon" information available for 2MQW)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:160
                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh.....hhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2mqw A   1 MFNNHEIDTILSTLRMEADPSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDAKSTPLRLRLYDNFVSKFYDKINQLSVVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKK 160
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2MQW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2MQW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2MQW)

(-) Gene Ontology  (9, 9)

NMR Structure(hide GO term definitions)

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  2mqw
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  RPN9_YEAST | Q04062
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  RPN9_YEAST | Q04062
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RPN9_YEAST | Q04062: 2mr3 2mri 3j47 3jck 3jco 3jcp 4cr2 4cr3 4cr4 5a5b 5mpb 5mpc 5mpd 5mpe 5wvi 5wvk

(-) Related Entries Specified in the PDB File

2mqx 2mr3