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(-) Description

Title :  SOLUTION NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF PROTEIN DR_A0006 FROM DEINOCOCCUS RADIODURANS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET DRR147D
 
Authors :  J. L. Mills, A. Ghosh, E. Garcia, H. Wang, C. Ciccosanti, R. Xiao, R. Nair, J. K. Everett, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, T. Szyperski, Northeast Structural Genomics Consortium (Nesg)
Date :  31 Dec 08  (Deposition) - 20 Jan 09  (Release) - 20 Jan 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Protein Structure, Nesg, Structural Genomics, Unknown Function, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. L. Mills, A. Ghosh, E. Garcia, H. Wang, C. Ciccosanti, R. Xiao, R. Nair, J. K. Everett, G. V. T. Swapna, T. B. Acton, B. Rost, G. T. Montelione, T. Szyperski
Solution Nmr Structure Of The C-Terminal Domain Of Protein Dr_a0006 From Deinococcus Radiodurans. Northeast Structural Genomics Consortium Target Drr147D.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN DR_A0006
    Atcc: 13939
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21-23C
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 98-243
    Gene: DR_A0006
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
    Strain: R1 / DSM 20539 / IFO 15346 / LMG 4051 / NCIB 9279

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2KCZ)

(-) Sites  (0, 0)

(no "Site" information available for 2KCZ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2KCZ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:155
 aligned with Q9RZE3_DEIRA | Q9RZE3 from UniProtKB/TrEMBL  Length:268

    Alignment length:155
                                   106       116       126       136       146       156       166       176       186       196       206       216       226       236       246     
         Q9RZE3_DEIRA    97 EGETVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDDKRSRWTVEAPAPLGTVSWEAELTADEPGKRIAWRSLPGARIENSGEVLFRPAPGARGTEVVVRLTYRPPGGSAGAVIARMFNQEPSQQLRDDLMRFKREQELGHAPTAQGQ 251
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -----------Polyketide_cyc-2kczA01 A:12-138                                                                                                ----------------- Pfam domains
         Sec.struct. author ...eeeeeeeee...hhhhhhhhh.................................................eee..hhhhhh.....eeeeee.hhhh.eeeeeeeee.....hhhhhhhhhh........hhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2kcz A   1 MGETVVRDAVTIGKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDDKRSRWTVEAPAPLGAVSWEAELTADEPGKRIAWRSLPGARIENSGEVLFRPAPGARGTEVVVRLTYRPPGGSAGAVIARMFNQEPSQQLRDDLMRFKREQELGLEHHHHHH 155
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2KCZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2KCZ)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: Bet_V_1_like (93)

(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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  2kcz
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9RZE3_DEIRA | Q9RZE3: 3ggn

(-) Related Entries Specified in the PDB File

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