2M23 - JenaLib

Title :   NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN OF THE GROUP II INTRON SC.AI5GAMMA INCLUDING EBS1 BOUND TO IBS1

Authors :   D. Kruschel, M. Skilandat, R. K. O. Sigel

Date :   12 Dec 12 (Deposition) - 18 Dec 13 (Release) - 16 Apr 14 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (20x)
NMR Structure *: A,B  (1x)

Keywords :   Group Ii Intron, Ribozyme, Hairpin, Ebs1, Ibs1, Splicing, 5'-Splice Site, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Kruschel, M. Skilandat, R. K. Sigel
Nmr Structure Of The 5' Splice Site In The Group Iib Intron Sc. Ai5 Gamma--Conformational Requirements For Exon-Intron Recognition.
Rna V. 20 295 2014
PubMed-ID: 24448450 | Reference-DOI: 10.1261/RNA.041137.113

Compounds

Molecule 1 - RNA (29-MER)
	Chains	:	A
	Engineered	:	YES
	Fragment	:	D3'EBS1
	Mutation	:	YES
	Organism Scientific	:	SACCHAROMYCES CEREVISIAE
	Organism Taxid	:	4932
	Other Details	:	SEQUENCE PRODUCED BY IN-VITRO TRANSCRIPTION FROM A SYNTHETIC DSDNA TEMPLATE USING T7 RNA-POLYMERASE
	Synthetic	:	YES

*Molecule 2 - RNA_(5'-R(CPAPGPUPGPUPC)-3')_**
	Chains	:	B
	Engineered	:	YES
	Fragment	:	IBS1
	Mutation	:	YES
	Synthetic	:	YES

Structural Features

Chains, Units

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NMR Structure

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Chain A from PDB  Type:RNA  Length:29
                                                            
                  2m23 A  1 GGAGUAUGUAUUGGCACUGAGCAUACUCC 29
                                    10        20

Chain B from PDB  Type:RNA  Length:7
                                      
                  2m23 B 59 CAGUGUC 65

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