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(-) Description

Title :  NMR SOLUTION STRUCTURE OF THE PROTEIN CODED BY GENE RHOS4_12090 OF RHODOBACTER SPHAEROIDES. NORTHEAST STRUCTURAL GENOMICS TARGET RHR5
 
Authors :  L. Wang, C. Chen, C. Nwosu, K. Cunningham, L. Owens, L. Ma, R. Xiao, J. Liu, M. C. Baran, G. Swapna, T. B. Acton, B. Rost, G. T. Montelione, Northeast Structural Genomics Consortium (Nesg)
Date :  28 Jun 07  (Deposition) - 21 Aug 07  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Nmr Solution, Structure, Nesg, Psi, Target Rhr5, Rhodobacter Sphaeroides, Structural Genomics, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Wang, G. T. Montelione
Nmr Solution Structure Of The Protein Coded By Gene Rhos4_12090 Of Rhodobacter Sphaeroides.
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Atcc: 17023
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21
    Expression System Strain: XL10
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: RHOS4_12090, RSP_2620
    Organism Scientific: RHODOBACTER SPHAEROIDES
    Organism Taxid: 1063
    Strain: 2.4.1, NCIB 8253, DSM 158

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:95
 aligned with Q3J357_RHOS4 | Q3J357 from UniProtKB/TrEMBL  Length:92

    Alignment length:95
                                                                                                                      92   
                                    10        20        30        40        50        60        70        80        90 |   
          Q3J357_RHOS4    1 MYLKRVDGPRQVTLPDGTVLSRADLPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKYRQL---  -
               SCOP domains d2jrta_ A: automated matches                                                                    SCOP domains
               CATH domains ---------2jrtA01 A:10-95 'winged helix' repressor DNA binding domain                            CATH domains
               Pfam domains DUF1153-2jrtA01 A:1-90                                                                    ----- Pfam domains
         Sec.struct. author ..........eee.....eee............hhhhhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhh..........hhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                  2jrt A  1 MYLKRVDGPRQVTLPDGTVLSRADLPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKYRQLHHH 95
                                    10        20        30        40        50        60        70        80        90
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

NMR Structure
(-)
Clan: HTH (544)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (Q3J357_RHOS4 | Q3J357)
molecular function
    GO:0043565    sequence-specific DNA binding    Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

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(-) Related Entries Specified in the PDB File

rhr5