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(-) Description

Title :  CRYSTAL STRUCTURE OF PROTEIN BH3703 FROM BACILLUS HALODURANS, PFAM DUF600
 
Authors :  U. A. Ramagopal, M. Russell, R. Toro, J. C. Freeman, C. Reyes, T. Gheyi, J. M. Sauder, S. K. Burley, S. C. Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
Date :  06 Sep 06  (Deposition) - 03 Oct 06  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.59
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Unknown Function, Structural Genomics, Psi, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. A. Ramagopal, M. Russell, R. Toro, J. C. Freeman, C. Reyes, T. Gheyi, J. M. Sauder, S. K. Burley, S. C. Almo
Structure Of Hypothetical Protein Bh3703 From Bacillus Halodurans
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BH3703 PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: BC-PSGX3(BC)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: BH3703
    Organism Scientific: BACILLUS HALODURANS
    Organism Taxid: 86665
    Strain: C-125-JCM 9153

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2SO41Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:66 , GLN A:67 , HOH A:627 , HOH A:750 , TYR B:143BINDING SITE FOR RESIDUE SO4 A 603
2AC2SOFTWAREGLU A:23 , LYS A:158 , ARG A:159 , TYR A:160 , HOH A:677 , HOH A:716 , HOH A:789 , HOH A:813BINDING SITE FOR RESIDUE GOL A 601
3AC3SOFTWAREASP B:18 , MET B:19 , ILE B:63 , VAL B:65 , GLU B:69 , PHE B:70 , LYS B:73 , HOH B:775BINDING SITE FOR RESIDUE GOL B 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2IA1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2IA1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2IA1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2IA1)

(-) Exons   (0, 0)

(no "Exon" information available for 2IA1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:169
 aligned with Q9K6M5_BACHD | Q9K6M5 from UniProtKB/TrEMBL  Length:169

    Alignment length:170
                             1                                                                                                                                                                        
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169
         Q9K6M5_BACHD     - -MEKQIESYYQEIAQLIIDMIPEEWAEVRFYAQEDHDGWKIFFFHYLSASSDEWTKDIDIRDVIKVPQDEFMEKYNELSFCISDFRKDYAEAFGEPWMSFQMTFYASGKFNIDFYYDKNPFDTFLTRLAWQYEHFGTIPEDSFYKETLNEYLEEKAQGKRYPFLEPLKEE 169
               SCOP domains -d2ia1a1 A:1-166 Uncharacterized protein BH3703                                                                                                                        --- SCOP domains
               CATH domains 2ia1A01 A:0-118 BH3703-like domains                                                                                    2ia1A02 A:119-177                                   CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh...eeeeeeeeee.....eeeeeeeee.....eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....eeeeee......hhhhhhhhhhhhhhh...-hhhhhhhhhhhhhhhhh...hhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ia1 A   0 SLEKQIESYYQEIAQLIIDMIPEEWAEVRFYAQEDHDGWKIFFFHYLSASSDEWTKDIDIRDVIKVPQDEFMEKYNELSFCISDFRKDYAEAFGEPWMSFQMTFYASGKFNIDFYYDKNPFDTFLTRLAWQYEHFGTIP-DSFYKETLNEYLEEKAQGKRYPFLEPLHHH 177
                                     9        19        29        39        49        59        69        79        89        99       109       119       129        |-|      149       159      |177
                                                                                                                                                                    138 |                       166|  
                                                                                                                                                                      140                        175  


Chain B from PDB  Type:PROTEIN  Length:170
 aligned with Q9K6M5_BACHD | Q9K6M5 from UniProtKB/TrEMBL  Length:169

    Alignment length:171
                             1                                                                                                                                                                     169 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169 
         Q9K6M5_BACHD     - -MEKQIESYYQEIAQLIIDMIPEEWAEVRFYAQEDHDGWKIFFFHYLSASSDEWTKDIDIRDVIKVPQDEFMEKYNELSFCISDFRKDYAEAFGEPWMSFQMTFYASGKFNIDFYYDKNPFDTFLTRLAWQYEHFGTIPEDSFYKETLNEYLEEKAQGKRYPFLEPLKEE-   -
               SCOP domains d2ia1b_ B: Uncharacterized protein BH3703                                                                                                                                   SCOP domains
               CATH domains 2ia1B01 B:0-118 BH3703-like domains                                                                                    2ia1B02 B:119-177                                    CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh...eeeeeeeeee.....eeeeeeeee.....eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....eeeeee......hhhhhhhhhhhhhhh...-hhhhhhhhhhhhhhhh....hhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ia1 B   0 SLEKQIESYYQEIAQLIIDMIPEEWAEVRFYAQEDHDGWKIFFFHYLSASSDEWTKDIDIRDVIKVPQDEFMEKYNELSFCISDFRKDYAEAFGEPWMSFQMTFYASGKFNIDFYYDKNPFDTFLTRLAWQYEHFGTIP-DSFYKETLNEYLEEKAQGKRYPFLEPLHHHH 177
                                     9        19        29        39        49        59        69        79        89        99       109       119       129        |-|      149       159      |176 
                                                                                                                                                                    138 |                       166|   
                                                                                                                                                                      140                        174
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2IA1)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 2IA1)

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        Q9K6M5_BACHD | Q9K6M5: 3i0t

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