Chain A from PDB Type:PROTEIN Length:334
aligned with BUB3_YEAST | P26449 from UniProtKB/Swiss-Prot Length:341
Alignment length:340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340
BUB3_YEAST 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
SCOP domains d2i3ta_ A: automated matches SCOP domains
CATH domains 2i3tA00 A:1-340 YVTN repeat-like/Quinoprotein amine dehydrogenase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.......eeeeeeehhh.eeeeee...eeeeeeee....eeeeeeeee....eeeeeee.....eeeeee....eeee.......eee.........eeeeeee...eeeeee...eeeeehhhhhh...eeeee...........eeeeeee..eeeeee...eeeeee..........eee......eeeeee......eeeeee...eeeeeee..------.eeeeeee..eee....eee..eeeeee......eeeee....eeeee....eeeeee......eeeeeee...eeeeeee.hhhhhh............eeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 Exon 2.1 PDB: A:1-340 (gaps) UniProt: 1-341 [INCOMPLETE] Transcript 2
2i3t A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - | 240 250 260 270 280 290 300 310 320 330 340
225 232
Chain B from PDB Type:PROTEIN Length:35
aligned with MAD3_YEAST | P47074 from UniProtKB/Swiss-Prot Length:515
Alignment length:43
362 372 382 392
MAD3_YEAST 353 QKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRV 395
SCOP domains ------------------------------------------- SCOP domains
CATH domains ------------------------------------------- CATH domains
Pfam domains ------------------------------------------- Pfam domains
Sec.struct. author ...eee..hhhhhh..--------...hhhhhhhhh....... Sec.struct. author
SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: B:353-395 (gaps) Transcript 1
2i3t B 353 MKPEKIDCNFKLIYCE--------LEFSLEEVLAISRNVYKRV 395
362 | - | 382 392
368 377
Chain C from PDB Type:PROTEIN Length:334
aligned with BUB3_YEAST | P26449 from UniProtKB/Swiss-Prot Length:341
Alignment length:340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340
BUB3_YEAST 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
SCOP domains d2i3tc_ C: automated matches SCOP domains
CATH domains 2i3tC00 C:1-340 YVTN repeat-like/Quinoprotein amine dehydrogenase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.......eeeeeeehhh.eeeeee...eeeeeeee....eeeeeeeee....eeeeeee.....eeeeee....eeee.......eee.........eeeeeee...eeeeee...eeeeehhhhhh...eeeee...........eeeeeee..eeeeee...eeeeee..........eee......eeeeee......eeeeee...eeeeeee..------.eeeeeee..eee....eee..eeeeee......eeeee....eeeee....eeeeee......eeeeeee...eeeeeee.hhhhhh............eeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 Exon 2.1 PDB: C:1-340 (gaps) UniProt: 1-341 [INCOMPLETE] Transcript 2
2i3t C 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - | 240 250 260 270 280 290 300 310 320 330 340
225 232
Chain D from PDB Type:PROTEIN Length:43
aligned with MAD3_YEAST | P47074 from UniProtKB/Swiss-Prot Length:515
Alignment length:43
362 372 382 392
MAD3_YEAST 353 QKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRV 395
SCOP domains ------------------------------------------- SCOP domains
CATH domains ------------------------------------------- CATH domains
Pfam domains ------------------------------------------- Pfam domains
Sec.struct. author ....ee..hhhhhh.............hhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: D:353-395 UniProt: 1-515 Transcript 1
2i3t D 353 MKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRV 395
362 372 382 392
Chain E from PDB Type:PROTEIN Length:334
aligned with BUB3_YEAST | P26449 from UniProtKB/Swiss-Prot Length:341
Alignment length:340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340
BUB3_YEAST 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
SCOP domains d2i3te_ E: automated matches SCOP domains
CATH domains 2i3tE00 E:1-340 YVTN repeat-like/Quinoprotein amine dehydrogenase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.......eeeeeeehhh.eeeeee...eeeeeeee....eeeeeeeee....eeeeeee.....eeeeee....eeee.......eee.........eeeeeee...eeeeee...eeeeehhhhhh...eeeee...........eeeeeee..eeeeee...eeeeee..........eee......eeeeee......eeeeee...eeeeeee..------.eeeeeee..eee....eee..eeeeee......eeeee....eeeee....eeeeee......eeeeeee...eeeeeee.hhhhhh............eeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 Exon 2.1 PDB: E:1-340 (gaps) UniProt: 1-341 [INCOMPLETE] Transcript 2
2i3t E 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - | 240 250 260 270 280 290 300 310 320 330 340
225 232
Chain F from PDB Type:PROTEIN Length:35
aligned with MAD3_YEAST | P47074 from UniProtKB/Swiss-Prot Length:515
Alignment length:43
362 372 382 392
MAD3_YEAST 353 QKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRV 395
SCOP domains ------------------------------------------- SCOP domains
CATH domains ------------------------------------------- CATH domains
Pfam domains ------------------------------------------- Pfam domains
Sec.struct. author ...eee..hhhhhh..--------...hhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: F:353-395 (gaps) Transcript 1
2i3t F 353 MKPEKIDCNFKLIYCE--------LEFSLEEVLAISRNVYKRV 395
362 | - | 382 392
368 377
Chain G from PDB Type:PROTEIN Length:334
aligned with BUB3_YEAST | P26449 from UniProtKB/Swiss-Prot Length:341
Alignment length:340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340
BUB3_YEAST 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
SCOP domains d2i3tg_ G: automated matches SCOP domains
CATH domains 2i3tG00 G:1-340 YVTN repeat-like/Quinoprotein amine dehydrogenase CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeee.......eeeeeeehhh.eeeeee...eeeeeeee....eeeeeeeee....eeeeeee.....eeeeee....eeee.......eee.........eeeeeee...eeeeee...eeeeehhhhhh...eeeee...........eeeeeee..eeeeee...eeeeee..........eee......eeeeee......eeeeee...eeeeeee..------.eeeeeee..eee....eee..eeeeee......eeeee....eeeee....eeeeee......eeeeeee...eeeeeee.hhhhhh............eeeeee... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 2 Exon 2.1 PDB: G:1-340 (gaps) UniProt: 1-341 [INCOMPLETE] Transcript 2
2i3t G 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD------SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 | - | 240 250 260 270 280 290 300 310 320 330 340
225 232
Chain H from PDB Type:PROTEIN Length:35
aligned with MAD3_YEAST | P47074 from UniProtKB/Swiss-Prot Length:515
Alignment length:43
362 372 382 392
MAD3_YEAST 353 QKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRV 395
SCOP domains ------------------------------------------- SCOP domains
CATH domains ------------------------------------------- CATH domains
Pfam domains ------------------------------------------- Pfam domains
Sec.struct. author ...eee..hhhhhh..--------...hhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: H:353-395 (gaps) Transcript 1
2i3t H 353 MKPEKIDCNFKLIYCE--------LEFSLEEVLAISRNVYKRV 395
362 | - | 382 392
368 377
Legend: |
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→ Mismatch |
(orange background) |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |