2FG8 - JenaLib

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   STRUCTURE OF HUMAN FERRITIN L CHAIN

Authors :   Z. M. Wang, C. Li, M. P. Ellenburg, J. R. Ruble, J. X. Ho, D. C. Carter

Date :   21 Dec 05 (Deposition) - 04 Jul 06 (Release) - 16 Nov 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H  (3x)

Keywords :   Ferritin Light Chain Perdeuterated, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Z. Wang, C. Li, M. Ellenburg, E. Soistman, J. Ruble, B. Wright, J. X. Ho, D. C. Carter
Structure Of Human Ferritin L Chain.
Acta Crystallogr. , Sect. D V. 62 800 2006
PubMed-ID: 16790936 | Reference-DOI: 10.1107/S0907444906018294

Molecule 1 - FERRITIN LIGHT CHAIN
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET 11A-LF
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	FTL
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	FERRITIN L SUBUNIT

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (3x)	:	A	B	C	D	E	F	G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 10)

No.	Name	Count	Type	Full Name
1	CS	10	Ligand/Ion	CESIUM ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CS	-1	Ligand/Ion	CESIUM ION

Asymmetric Unit (9, 9)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASP D:131 , GLU D:134 , ASP E:131 , GLU E:134 , ASP H:131 , GLU H:134	BINDING SITE FOR RESIDUE CS E 201
2	AC2	SOFTWARE	ASP A:131 , GLU A:134 , ASP B:131 , GLU B:134 , ASP C:131 , GLU C:134 , CS C:205	BINDING SITE FOR RESIDUE CS A 202
3	AC3	SOFTWARE	ASP D:131 , THR E:135	BINDING SITE FOR RESIDUE CS D 203
4	AC4	SOFTWARE	GLU A:134 , GLU C:134	BINDING SITE FOR RESIDUE CS A 204
5	AC5	SOFTWARE	CS A:202 , THR C:135	BINDING SITE FOR RESIDUE CS C 205
6	AC6	SOFTWARE	GLU E:134 , GLU H:134	BINDING SITE FOR RESIDUE CS E 206
7	AC7	SOFTWARE	ASP F:131 , GLU F:134	BINDING SITE FOR RESIDUE CS F 207
8	AC8	SOFTWARE	ASP F:131	BINDING SITE FOR RESIDUE CS F 208
9	AC9	SOFTWARE	ASP G:131	BINDING SITE FOR RESIDUE CS G 210

(no "SS Bond" information available for 2FG8)

Asymmetric Unit

No.	Residues
1	Gly A:160	-	Pro A:161
2	Gly B:160	-	Pro B:161
3	Gly C:160	-	Pro C:161
4	Gly D:160	-	Pro D:161
5	Gly F:160	-	Pro F:161
6	Gly G:160	-	Pro G:161
7	Gly H:160	-	Pro H:161

Asymmetric Unit (2, 16)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_070948	T	30	I	FRIL_HUMAN	Disease (HHCS)	397514540	A/B/C/D/E/F/G/H	T	33	I
2	UniProt	VAR_026633	A	96	T	FRIL_HUMAN	Disease (NBIA3)	104894685	A/B/C/D/E/F/G/H	A	99	T

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 48)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_070948	T	30	I	FRIL_HUMAN	Disease (HHCS)	397514540	A/B/C/D/E/F/G/H	T	33	I
2	UniProt	VAR_026633	A	96	T	FRIL_HUMAN	Disease (NBIA3)	104894685	A/B/C/D/E/F/G/H	A	99	T

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (3, 24)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	FERRITIN_LIKE	PS50905	Ferritin-like diiron domain profile.	FRIL_HUMAN	7-156	8	A:10-159 B:10-159 C:10-159 D:10-159 E:10-159 F:10-159 G:10-159 H:10-159
2	FERRITIN_1	PS00540	Ferritin iron-binding regions signature 1.	FRIL_HUMAN	58-76	8	A:61-79 B:61-79 C:61-79 D:61-79 E:61-79 F:61-79 G:61-79 H:61-79
3	FERRITIN_2	PS00204	Ferritin iron-binding regions signature 2.	FRIL_HUMAN	123-143	8	A:126-146 B:126-146 C:126-146 D:126-146 E:126-146 F:126-146 G:126-146 H:126-146

Biological Unit 1 (3, 72)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	FERRITIN_LIKE	PS50905	Ferritin-like diiron domain profile.	FRIL_HUMAN	7-156	24	A:10-159 B:10-159 C:10-159 D:10-159 E:10-159 F:10-159 G:10-159 H:10-159
2	FERRITIN_1	PS00540	Ferritin iron-binding regions signature 1.	FRIL_HUMAN	58-76	24	A:61-79 B:61-79 C:61-79 D:61-79 E:61-79 F:61-79 G:61-79 H:61-79
3	FERRITIN_2	PS00204	Ferritin iron-binding regions signature 2.	FRIL_HUMAN	123-143	24	A:126-146 B:126-146 C:126-146 D:126-146 E:126-146 F:126-146 G:126-146 H:126-146

Asymmetric Unit (4, 32)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000331825	1	ENSE00001226683	chr19:49468566-49468866	301	FRIL_HUMAN	1-34	34	8	A:5-37 B:5-37 C:5-37 D:5-37 E:5-37 F:5-37 G:5-37 H:5-37	33 33 33 33 33 33 33 33
1.2	ENST00000331825	2	ENSE00000718697	chr19:49469027-49469173	147	FRIL_HUMAN	35-83	49	8	A:38-86 B:38-86 C:38-86 D:38-86 E:38-86 F:38-86 G:38-86 H:38-86	49 49 49 49 49 49 49 49
1.3	ENST00000331825	3	ENSE00000718702	chr19:49469538-49469663	126	FRIL_HUMAN	84-125	42	8	A:87-128 B:87-128 C:87-128 D:87-128 E:87-128 F:87-128 G:87-128 H:87-128	42 42 42 42 42 42 42 42
1.4	ENST00000331825	4	ENSE00001316584	chr19:49469840-49470135	296	FRIL_HUMAN	126-175	50	8	A:129-178 B:129-178 C:129-178 D:129-178 E:129-178 F:129-178 G:129-178 H:129-178	50 50 50 50 50 50 50 50

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8a_ A: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8A00 A:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: A:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: A:5-37            Exon 1.2  PDB: A:38-86 UniProt: 35-83            Exon 1.3  PDB: A:87-128 UniProt: 84-125   Exon 1.4  PDB: A:129-178 UniProt: 126-175          Transcript 1
                 2fg8 A   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain B from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8b_ B: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8B00 B:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: B:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: B:5-37            Exon 1.2  PDB: B:38-86 UniProt: 35-83            Exon 1.3  PDB: B:87-128 UniProt: 84-125   Exon 1.4  PDB: B:129-178 UniProt: 126-175          Transcript 1
                 2fg8 B   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain C from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8c_ C: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8C00 C:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: C:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: C:5-37            Exon 1.2  PDB: C:38-86 UniProt: 35-83            Exon 1.3  PDB: C:87-128 UniProt: 84-125   Exon 1.4  PDB: C:129-178 UniProt: 126-175          Transcript 1
                 2fg8 C   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain D from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8d_ D: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8D00 D:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: D:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: D:5-37            Exon 1.2  PDB: D:38-86 UniProt: 35-83            Exon 1.3  PDB: D:87-128 UniProt: 84-125   Exon 1.4  PDB: D:129-178 UniProt: 126-175          Transcript 1
                 2fg8 D   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain E from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8e_ E: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8E00 E:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: E:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: E:5-37            Exon 1.2  PDB: E:38-86 UniProt: 35-83            Exon 1.3  PDB: E:87-128 UniProt: 84-125   Exon 1.4  PDB: E:129-178 UniProt: 126-175          Transcript 1
                 2fg8 E   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain F from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8f_ F: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8F00 F:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: F:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: F:5-37            Exon 1.2  PDB: F:38-86 UniProt: 35-83            Exon 1.3  PDB: F:87-128 UniProt: 84-125   Exon 1.4  PDB: F:129-178 UniProt: 126-175          Transcript 1
                 2fg8 F   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain G from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8g_ G: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8G00 G:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: G:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: G:5-37            Exon 1.2  PDB: G:38-86 UniProt: 35-83            Exon 1.3  PDB: G:87-128 UniProt: 84-125   Exon 1.4  PDB: G:129-178 UniProt: 126-175          Transcript 1
                 2fg8 G   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Chain H from PDB  Type:PROTEIN  Length:174
 aligned with FRIL_HUMAN | P02792 from UniProtKB/Swiss-Prot  Length:175

    Alignment length:174
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171    
           FRIL_HUMAN     2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 175
               SCOP domains d2fg8h_ H: (Apo)ferritin                                                                                                                                                       SCOP domains
               CATH domains 2fg8H00 H:5-178  [code=1.20.1260.10, no name defined]                                                                                                                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------I-----------------------------------------------------------------T------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----FERRITIN_LIKE  PDB: H:10-159 UniProt: 7-156                                                                                                           ------------------- PROSITE (1)
                PROSITE (2) --------------------------------------------------------FERRITIN_1         ----------------------------------------------FERRITIN_2           -------------------------------- PROSITE (2)
               Transcript 1 Exon 1.1  PDB: H:5-37            Exon 1.2  PDB: H:38-86 UniProt: 35-83            Exon 1.3  PDB: H:87-128 UniProt: 84-125   Exon 1.4  PDB: H:129-178 UniProt: 126-175          Transcript 1
                 2fg8 H   5 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHD 178
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Ferritin-like (533)

Superfamily: Ferritin-like (489)

Family: Ferritin (232)

Protein domain: (Apo)ferritin (68)

Human (Homo sapiens) [TaxId: 9606] (7)

1a	d2fg8a_	A:
1b	d2fg8h_	H:
1c	d2fg8b_	B:
1d	d2fg8c_	C:
1e	d2fg8d_	D:
1f	d2fg8e_	E:
1g	d2fg8f_	F:
1h	d2fg8g_	G:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Alpha (13335)

Architecture: Up-down Bundle (3216)

Topology: Ferritin; (180)

Homologous Superfamily: [code=1.20.1260.10, no name defined] (180)

Human (Homo sapiens) (16)

1a	2fg8A00	A:5-178
1b	2fg8B00	B:5-178
1c	2fg8C00	C:5-178
1d	2fg8D00	D:5-178
1e	2fg8E00	E:5-178
1f	2fg8F00	F:5-178
1g	2fg8G00	G:5-178
1h	2fg8H00	H:5-178

(no "Pfam Domain" information available for 2FG8)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (FRIL_HUMAN | P02792)

molecular function
	GO:0008199	ferric iron binding	Interacting selectively and non-covalently with ferric iron, Fe(III).
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0005506	iron ion binding	Interacting selectively and non-covalently with iron (Fe) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0006879	cellular iron ion homeostasis	Any process involved in the maintenance of an internal steady state of iron ions at the level of a cell.
	GO:0055072	iron ion homeostasis	Any process involved in the maintenance of an internal steady state of iron ions within an organism or cell.
	GO:0006826	iron ion transport	The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0008043	intracellular ferritin complex	A ferritin complex located in the cell. Intracellular ferritin complexes contain 24 subunits, in a mixture of L (light) chains and H (heavy) chains.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Asymmetric Unit
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	Cis Peptide Bonds
		Gly A:160 - Pro A:161	[ RasMol ]
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	2fg8
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	FRIL_HUMAN \| P02792
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UniProtKB/Swiss-Prot
	FRIL_HUMAN \| P02792	:	2ffx 2fg4 3kxu 4v6b 5lg8

2ffx	STRUCTURE OF HUMAN FERRITIN L. CHAIN
2fg4	STRUCTURE OF HUMAN FERRITIN L CHAIN

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 10)

Sites (9, 9)

SS Bonds (0, 0)

Cis Peptide Bonds (7, 7)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 16)

PROSITE Motifs (3, 24)

Exons (4, 32)

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SCOP Domains (1, 8)

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Gene Ontology (12, 12)

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