Chain A from PDB Type:PROTEIN Length:366
aligned with SPB10_CHICK | O73790 from UniProtKB/Swiss-Prot Length:410
Alignment length:410
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
SPB10_CHICK 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDDIKDGTTGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSVINHVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2dutA01 A:1-198,A:302-355 Antithrombin, subunit I, domain 2 2dutA02 A:199-301 ,A:362-404 Alpha-1-antitrypsin, domain 1 2dutA01 A:1-198,A:302-355 ------2dutA02 A:199 -301,A:362-404 ------ CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhh..hhhhhhhhhhhhh.---------------------------------.hhhhhhhhhhhhh........eeeeeeee......hhhhhhhhhhhh...eee....hhhhhhhhhhhhhhhhh..................eeeeeee...ee.....hhhhheeeeee.-...eeeeeeeeeeeeeeee......eeeeeee.hhhh.eeeeeee..-----..hhhhhhh.hhhhhhhhhh....eeeeeeeeee...eeeeeehhhhhhhhh.hhhhh..........---..eeeeeeeeee.....ee................--..eeee....eeeeee......eeeeeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.3 PDB: A:1-56 UniProt: 1-56 Exon 1.4 PDB: A:57-60 Exon 1.5 PDB: A:94-130 UniProt: 85-130 Exon 1.6 PDB: A:131-170 -----------------------------------------------Exon 1.8 PDB: A:218-273 (gaps) UniProt: 218-273 Exon 1.9b PDB: A:274-410 (gaps) UniProt: 274-410 Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7 PDB: A:170-217 (gaps) UniProt: 170-217------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
2dut A 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHF---------------------------------IHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRL-KNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDD-----TGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTD---LAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSV--HVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
10 20 30 40 50 60 - - - | 100 110 120 130 140 150 160 170 180 190 200 210 | |220 230 240 250 260 | 270 280 290 300 310 320 330 | 340 350 360 370 | |380 390 400 410
60 94 215 | 263 269 336 340 374 |
217 377
Chain B from PDB Type:PROTEIN Length:366
aligned with SPB10_CHICK | O73790 from UniProtKB/Swiss-Prot Length:410
Alignment length:410
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
SPB10_CHICK 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDDIKDGTTGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSVINHVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2dutB01 B:1-198,B:302-355 Antithrombin, subunit I, domain 2 2dutB02 B:199-301 ,B:362-404 Alpha-1-antitrypsin, domain 1 2dutB01 B:1-198,B:302-355 ------2dutB02 B:199 -301,B:362-404 ------ CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhh..hhhhhhhhhhhhh.---------------------------------.hhhhhhhhhhhhh........eeeeeeee......hhhhhhhhhhhh...eee....hhhhhhhhhhhhhhhhh..................eeeeeee...ee.....hhhhheeeeee.-...eeeeeeeeeeeeeeee......eeeeeee.hhhh.eeeeeee..-----..hhhhhhh.hhhhhhhhhh....eeeeeeeeee...eeeeeehhhhhhhhh.hhhhh..........---..eeeeeeeeee.....ee................--..eeee....eeeeee......eeeeeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.3 PDB: B:1-56 UniProt: 1-56 Exon 1.4 PDB: B:57-60 Exon 1.5 PDB: B:94-130 UniProt: 85-130 Exon 1.6 PDB: B:131-170 -----------------------------------------------Exon 1.8 PDB: B:218-273 (gaps) UniProt: 218-273 Exon 1.9b PDB: B:274-410 (gaps) UniProt: 274-410 Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7 PDB: B:170-217 (gaps) UniProt: 170-217------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
2dut B 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHF---------------------------------IHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRL-KNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDD-----TGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTD---LAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSV--HVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
10 20 30 40 50 60 - - - | 100 110 120 130 140 150 160 170 180 190 200 210 | |220 230 240 250 260 | 270 280 290 300 310 320 330 | 340 350 360 370 | |380 390 400 410
60 94 215 | 263 269 336 340 374 |
217 377
Chain C from PDB Type:PROTEIN Length:366
aligned with SPB10_CHICK | O73790 from UniProtKB/Swiss-Prot Length:410
Alignment length:410
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
SPB10_CHICK 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDDIKDGTTGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSVINHVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2dutC01 C:1-198,C:302-355 Antithrombin, subunit I, domain 2 2dutC02 C:199-301 ,C:362-404 Alpha-1-antitrypsin, domain 1 2dutC01 C:1-198,C:302-355 ------2dutC02 C:199 -301,C:362-404 ------ CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhh..hhhhhhhhhhhhh.---------------------------------.hhhhhhhhhhhhh........eeeeeeee......hhhhhhhhhhhh...eee....hhhhhhhhhhhhhhhhh..................eeeeeee...ee.....hhhhheeeeee.-...eeeeeeeeeeeeeeee......eeeeeee.hhhh.eeeeeee..-----..hhhhhhh.hhhhhhhhhh....eeeeeeeeee...eeeeeehhhhhhhhh.hhhhh..........---..eeeeeeeeee.....ee.......eeee.....--..eeee....eeeeee......eeeeeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.3 PDB: C:1-56 UniProt: 1-56 Exon 1.4 PDB: C:57-60 Exon 1.5 PDB: C:94-130 UniProt: 85-130 Exon 1.6 PDB: C:131-170 -----------------------------------------------Exon 1.8 PDB: C:218-273 (gaps) UniProt: 218-273 Exon 1.9b PDB: C:274-410 (gaps) UniProt: 274-410 Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7 PDB: C:170-217 (gaps) UniProt: 170-217------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
2dut C 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHF---------------------------------IHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRL-KNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDD-----TGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTD---LAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSV--HVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
10 20 30 40 50 60 - - - | 100 110 120 130 140 150 160 170 180 190 200 210 | |220 230 240 250 260 | 270 280 290 300 310 320 330 | 340 350 360 370 | |380 390 400 410
60 94 215 | 263 269 336 340 374 |
217 377
Chain D from PDB Type:PROTEIN Length:366
aligned with SPB10_CHICK | O73790 from UniProtKB/Swiss-Prot Length:410
Alignment length:410
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
SPB10_CHICK 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDDIKDGTTGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTDKKDLAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSVINHVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 2dutD01 D:1-198,D:302-355 Antithrombin, subunit I, domain 2 2dutD02 D:199-301 ,D:362-404 Alpha-1-antitrypsin, domain 1 2dutD01 D:1-198,D:302-355 ------2dutD02 D:199 -301,D:362-404 ------ CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhhh..hhhhhhhhhhhhh.---------------------------------.hhhhhhhhhhhhh........eeeeeeee......hhhhhhhhhhhh...eee....hhhhhhhhhhhhhhhhh..................eeeeeee...ee.....hhhhheeeeee.-...eeeeeeeeeeeeeeee......eeeeeee.hhhh.eeeeeee..-----..hhhhhhh.hhhhhhhhhh....eeeeeeeeee...eeeeeehhhhhhhhh.hhhhh..........---..eeeeeeeeee.....ee.......eeee.....--..eeee....eeeeee......eeeeeee..... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 (1) Exon 1.3 PDB: D:1-56 UniProt: 1-56 Exon 1.4 PDB: D:57-60 Exon 1.5 PDB: D:94-130 UniProt: 85-130 Exon 1.6 PDB: D:131-170 -----------------------------------------------Exon 1.8 PDB: D:218-273 (gaps) UniProt: 218-273 Exon 1.9b PDB: D:274-410 (gaps) UniProt: 274-410 Transcript 1 (1)
Transcript 1 (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7 PDB: D:170-217 (gaps) UniProt: 170-217------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
2dut D 1 MEQVSASIGNFTVDLFNKLNETNRDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHF---------------------------------IHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRL-KNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYVKRELSMFILLPDD-----TGLEQLERELTYERLSEWADSKMMTETLVDLHLPKFSLEDRIDLRDTLRNMGMTTAFTTNADFRGMTD---LAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSV--HVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPVE 410
10 20 30 40 50 60 - - - | 100 110 120 130 140 150 160 170 180 190 200 210 | |220 230 240 250 260 | 270 280 290 300 310 320 330 | 340 350 360 370 | |380 390 400 410
60 94 215 | 263 269 336 340 374 |
217 377
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |