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(-) Description

Title :  STRUCTURE OF SH28GST IN COMPLEX WITH GSH AT PH 6.0
 
Authors :  P. Baiocco, L. J. Gourlay, F. Angelucci, A. Bellelli, A. E. Miele, M. Bru
Date :  20 Dec 05  (Deposition) - 26 Jun 06  (Release) - 17 Apr 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.49
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Sigma Class Gst, Detoxification, Glutathione, Prostaglandin D2 Synthase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Baiocco, L. J. Gourlay, F. Angelucci, J. Fontaine, M. Herve, A. E. Miele, F. Trottein, M. Brunori, A. Bellelli
Probing The Mechanism Of Gsh Activation In Schistosoma Haematobium Glutathione-S-Transferase By Site-Directed Mutagenesis And X-Ray Crystallography.
J. Mol. Biol. V. 360 678 2006
PubMed-ID: 16777141  |  Reference-DOI: 10.1016/J.JMB.2006.05.040

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE 28 KDA
    Chains: A
    EC Number: 2.5.1.18
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-23D
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: SCHISTOSOMA HAEMATOBIUM
    Organism Taxid: 6185
    Synonym: GST 28, GST CLASS-SIGMA

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1GSH1Ligand/IonGLUTATHIONE
2PG41Ligand/IonTETRAETHYLENE GLYCOL
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
2PG42Ligand/IonTETRAETHYLENE GLYCOL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:10 , PHE A:11 , ARG A:16 , TRP A:41 , LYS A:45 , ARG A:52 , LEU A:53 , PRO A:54 , GLU A:70 , SER A:71 , ASP A:104 , HOH A:2050BINDING SITE FOR RESIDUE GSH A1212
2AC2SOFTWARELYS A:80 , GLY A:86 , GLY A:87 , THR A:88 , TYR A:92BINDING SITE FOR RESIDUE PG4 A1213

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2CA8)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Leu A:53 -Pro A:54

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2CA8)

(-) PROSITE Motifs  (2, 2)

Asymmetric Unit (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GST_NTERPS50404 Soluble glutathione S-transferase N-terminal domain profile.GST28_SCHBO4-86  1A:4-86
2GST_CTERPS50405 Soluble glutathione S-transferase C-terminal domain profile.GST28_SCHBO88-211  1A:88-211
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GST_NTERPS50404 Soluble glutathione S-transferase N-terminal domain profile.GST28_SCHBO4-86  2A:4-86
2GST_CTERPS50405 Soluble glutathione S-transferase C-terminal domain profile.GST28_SCHBO88-211  2A:88-211

(-) Exons   (0, 0)

(no "Exon" information available for 2CA8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:208
 aligned with GST28_SCHBO | P30113 from UniProtKB/Swiss-Prot  Length:211

    Alignment length:208
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203        
          GST28_SCHBO     4 DHIKVIYFNGRGRAESIRMTLVAAGVNYEDERISFQDWPKIKPTIPGGRLPAVKITDNHGHVKWMVESLAIARYMAKKHHMMGGTEEEYYNVEKLIGQAEDLEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIAVIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSDRAATPF 211
               SCOP domains d2ca8a2 A:4-84 Class alpha GST                                                   d2ca8a1 A:85-211 Class alpha GST                                                                                                SCOP domains
               CATH domains 2ca8A01 A:4-83 Glutaredoxin                                                     2ca8A02 A:84-211  [code=1.20.1050.10, no name defined]                                                                           CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhh...eeeee...hhhhhhhhh......eeeee.....eeeeehhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE GST_NTER  PDB: A:4-86 UniProt: 4-86                                                -GST_CTER  PDB: A:88-211 UniProt: 88-211                                                                                      PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2ca8 A   4 DHIKVIYFNGRGRAESIRMTLVAAGVNYEDERISFQDWPKIKPTIPGGRLPAVKITDNHGHVKWMVESLAIARYMAKKHHMMGGTEEEYYNVEKLIGQAEDLEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIAVIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSDRAATPF 211
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2CA8)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A   (GST28_SCHBO | P30113)
molecular function
    GO:0004364    glutathione transferase activity    Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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  2.5.1.18
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GST28_SCHBO | P30113: 2c80 2c8u 2cai 2caq 2f8f

(-) Related Entries Specified in the PDB File

2c80 STRUCTURE OF SH28GST IN COMPLEX WITH S-HEXYL GLUTATHIONE
2c8u STRUCTURE OF R21Q MUTANT OF SH28GST
2cai STRUCTURE OF GLUTATHIONE-S-TRANSFERASE MUTANT, R21L, FROM SCHISTOSOMA HAEMATOBIUM
2caq STUCTURE OF R21L MUTANT OF SH28GST IN COMPLEX WITH GSH