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(-) Description

Title :  STRUCTURE OF THE FLUORESCENT PROTEIN CMFP512 AT 1.35A FROM CERIANTHUS MEMBRANACEUS
 
Authors :  F. Renzi, K. Nienhaus, J. Wiedenmann, B. Vallone, G. U. Nienhaus
Date :  12 Dec 05  (Deposition) - 30 Oct 06  (Release) - 23 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.35
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  E,F,G,H  (1x)
Biol. Unit 2:  A,B,C,D  (1x)
Keywords :  Fluorescent Protein, Beta-Barrel, Bioluminescence, Luminescence, Luminescent Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Nienhaus, F. Renzi, B. Vallone, J. Wiedenmann, G. U. Nienhaus
Exploring Chromophore-Protein Interactions In Fluorescent Protein Cmfp512 From Cerianthus Membranaceus: X-Ray Structure Analysis And Optical Spectroscopy.
Biochemistry V. 45 12492 2006
PubMed-ID: 17059211  |  Reference-DOI: 10.1021/BI060885C

(-) Compounds

Molecule 1 - GREEN FLUORESCENT PROTEIN FP512
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: CERIANTHUS MEMBRANACEUS
    Organism Taxid: 208460
    Other Details: CHROMOPHORE: AN IMIDAZOLINONE RING FROM THE CYCLIZATION BETWEEN GLN62 AND GLY64 BACKBONE ATOMS AND COPLANAR TYR63

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x):     EFGH
Biological Unit 2 (1x): ABCD    

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1CRQ8Mod. Amino Acid[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1CRQ4Mod. Amino Acid[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1CRQ4Mod. Amino Acid[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID

(-) Sites  (0, 0)

(no "Site" information available for 2C9J)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2C9J)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2C9J)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2C9J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2C9J)

(-) Exons   (0, 0)

(no "Exon" information available for 2C9J)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:214
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:216
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216      
         Q5ZQQ5_CERMM     7 NLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLP 222
               SCOP domains d2c9ja_ A: automated matches                                                                                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhh.....--..............hhhhh...eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2c9j A   7 NLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLP 222
                                    16        26        36        46        56     |  66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216      
                                                                                  62-CRQ                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:218
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223
         Q5ZQQ5_CERMM     4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPK 223
               SCOP domains d2c9jb_ B: automated matches                                                                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhhhhhh.--............hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j B   4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPK 223
                                    13        23        33        43        53        |- |      73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223
                                                                                     62-CRQ                                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:218
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:220
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223
         Q5ZQQ5_CERMM     4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPK 223
               SCOP domains d2c9jc_ C: automated matches                                                                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhh.....--............hhhhhh....eeeeeeeee....eeeeeeeeee....eeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j C   4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPK 223
                                    13        23        33        43        53        |- |      73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223
                                                                                     62-CRQ                                                                                                                                                             


Chain D from PDB  Type:PROTEIN  Length:219
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:221
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223 
         Q5ZQQ5_CERMM     4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
               SCOP domains d2c9jd_ D: automated matches                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhh.....--............hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j D   4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
                                    13        23        33        43        53        |- |      73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223 
                                                                                     62-CRQ                                                                                                                                                              


Chain E from PDB  Type:PROTEIN  Length:218
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:220
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224
         Q5ZQQ5_CERMM     5 DNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
               SCOP domains d2c9je_ E: automated matches                                                                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhh.....--............hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j E   5 DNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
                                    14        24        34        44        54       | -|       74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224
                                                                                    62-CRQ                                                                                                                                                              


Chain F from PDB  Type:PROTEIN  Length:216
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:218
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216        
         Q5ZQQ5_CERMM     7 NLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
               SCOP domains d2c9jf_ F: automated matches                                                                                                                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhh.....--..............hhhhh...eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j F   7 NLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
                                    16        26        36        46        56     |  66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216        
                                                                                  62-CRQ                                                                                                                                                              


Chain G from PDB  Type:PROTEIN  Length:218
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:220
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224
         Q5ZQQ5_CERMM     5 DNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
               SCOP domains d2c9jg_ G: automated matches                                                                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhhhhhh.--............hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j G   5 DNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
                                    14        24        34        44        54       | -|       74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224
                                                                                    62-CRQ                                                                                                                                                              


Chain H from PDB  Type:PROTEIN  Length:219
 aligned with Q5ZQQ5_CERMM | Q5ZQQ5 from UniProtKB/TrEMBL  Length:225

    Alignment length:221
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223 
         Q5ZQQ5_CERMM     4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFQYGFRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
               SCOP domains d2c9jh_ H: automated matches                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeeee..eeeeeeeeeeee....eeeeeeee........hhhhh.....--............hhhhhh....eeeeeeeee....eeeeeeeeee....eeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee..........eeeeeeeeeeee.hhh.eeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c9j H   4 LDNNLSVSVYMKGNVNNHEFEYDGIGGGDPNSGQFSLKTKLRGGKPLPFSYDIITMGFq--FRAFTKYPEGIADYFKGSFPEAFQWNRRIEFEDGGVINMSSDITYKDKVLHGDVWALGVNFPPNGPVMKNEIVMEEPAEETLTAKNGVLVGFCPKAYLLKDGSYYYGHMTTFYRSKKSGQPLPGFHFIKHRLVKTKVEPGFKMVEQAEYATAHVCDLPKP 224
                                    13        23        33        43        53        |- |      73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223 
                                                                                     62-CRQ
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2C9J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2C9J)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (Q5ZQQ5_CERMM | Q5ZQQ5)
biological process
    GO:0008218    bioluminescence    The production of light by certain enzyme-catalyzed reactions in cells.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1b9c GREEN FLUORESCENT PROTEIN MUTANT F99S, M153T AND V163A
1bfp BLUE VARIANT OF GREEN FLUORESCENT PROTEIN
1c4f GREEN FLUORESCENT PROTEIN S65T AT PH 4.6
1ema GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA
1emb GREEN FLUORESCENT PROTEIN (GFP) FROM AEQUOREAVICTORIA, GLN 80 REPLACED WITH ARG
1emc GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
1eme GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
1emf GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
1emg GREEN FLUORESCENT PROTEIN (65-67 REPLACED BY CRO, S65TSUBSTITUTION, Q80R)
1emk GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
1eml GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
1emm GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
1f09 CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP)VARIANT YFP-H148Q WITH TWO BOUND IODIDES
1f0b CRYSTAL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN (GFP)VARIANT YFP-H148Q
1g7k CRYSTAL STRUCTURE OF DSRED, A RED FLUORESCENT PROTEIN FROMDISCOSOMA SP. RED
1gfl STRUCTURE OF GREEN FLUORESCENT PROTEIN
1ggx RED FLUORESCENT PROTEIN (FP583 OR DSRED( CLONTECH)) FROMDISCOSOMA SP.
1h6r A REDOX SENSITIVE VARIANT OF GREEN FLUORESCENT PROTEIN
1hcj PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT PROTEIN
1huy CRYSTAL STRUCTURE OF CITRINE, AN IMPROVED YELLOW VARIANT OFGREEN FLUORESCENT PROTEIN
1jby CRYSTAL STRUCTURE ANALYSIS OF A DUAL- WAVELENGTH EMISSIONGREEN FLUORESCENT PROTEIN VARIANT AT LOW PH
1jbz CRYSTAL STRUCTURE ANALYSIS OF A DUAL- WAVELENGTH EMISSIONGREEN FLUORESCENT PROTEIN VARIANT AT HIGH PH
1jc0 CRYSTAL STRUCTURE ANALYSIS OF A REDOX- SENSITIVE GREENFLUORESCENT PROTEIN VARIANT IN A REDUCED FORM
1jc1 CRYSTAL STRUCTURE ANALYSIS OF A REDOX- SENSITIVE GREENFLUORESCENT PROTEIN VARIANT IN A OXIDIZED FORM
1kp5 CYCLIC GREEN FLUORESCENT PROTEIN
1kyp CRYSTAL STRUCTURE OF AN APO GREEN FLUORESCENT PROTEIN ZNBIOSENSOR
1kyr CRYSTAL STRUCTURE OF A CU-BOUND GREEN FLUORESCENT PROTEINZN BIOSENSOR
1kys CRYSTAL STRUCTURE OF A ZN-BOUND GREEN FLUORESCENT PROTEINBIOSENSOR
1myw CRYSTAL STRUCTURE OF A YELLOW FLUORESCENT PROTEIN WITHIMPROVED MATURATION AND REDUCED ENVIRONMENTAL SENSITIVITY
1oxd EXPANSION OF THE GENETIC CODE ENABLES DESIGN OF A NOVEL"GOLD" CLASS OF GREEN FLUORESCENT PROTEINS
1oxe EXPANSION OF THE GENETIC CODE ENABLES DESIGN OF A NOVEL"GOLD" CLASS OF GREEN FLUORESCENT PROTEINS
1oxf EXPANSION OF THE GENETIC CODE ENABLES DESIGN OF A NOVEL"GOLD" CLASS OF GREEN FLUORESCENT PROTEINS
1q4a S65T Q80R GREEN FLUORESCENT PROTEIN (GFP) PH 8.5
1q4b S65T Q80R GREEN FLUORESCENT PROTEIN (GFP) PH 5.5
1q4c S65T Q80R T203C GREEN FLUORESCENT PROTEIN ( GFP) PH 8.5
1q4d S65T Q80R T203C GREEN FLUORESCENT PROTEIN ( GFP) PH 5.5
1q4e S65T Q80R Y145C GREEN FLUORESCENT PROTEIN ( GFP) PH 8.5
1q73 S65T Q80R Y145C T203C GREEN FLUORESCENT PROTEIN (GFP) PH 8.5
1qxt CRYSTAL STRUCTURE OF PRECYCLIZED INTERMEDIATE FOR THE GREENFLUORESCENT PROTEIN R96A VARIANT (A)
1qy3 CRYSTAL STRUCTURE OF PRECYCLIZED INTERMEDIATE FOR THE GREENFLUORESCENT PROTEIN R96A VARIANT (B)
1qyf CRYSTAL STRUCTURE OF MATURED GREEN FLUORESCENT PROTEIN R96AVARIANT
1rm9 PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE
1rmm PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE
1rmo PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE
1rmp PROBING THE ROLE OF TRYPTOPHANS IN AEQUOREA VICTORIA GREENFLUORESCENT PROTEINS WITH AN EXPANDED GENETIC CODE
1rrx CRYSTALLOGRAPHIC EVIDENCE FOR ISOMERIC CHROMOPHORES IN 3-FLUOROTYROSYL-GREEN FLUORESCENT PROTEIN
1s6z ENHANCED GREEN FLUORESCENT PROTEIN CONTAINING THE Y66LSUBSTITUTION
1w7s WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT PROTEIN
1w7t PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT PROTEIN AT 100 K
1w7u PHOTOPRODUCT OF THE WILD-TYPE AEQUOREA VICTORIA GREEN FLUORESCENT PROTEIN AFTER STRUCTURAL ANNEALING AT 170K
1xa9 CRYSTAL STRUCTURE OF YELLOW FLUORESCENT PROTEIN ZFP538 K66MGREEN MUTANT
1xae CRYSTAL STRUCTURE OF WILD TYPE YELLOW FLUORESCENT PROTEINZFP538 FROM ZOANTHUS
1xss SEMI-RATIONAL ENGINEERING OF A GREEN- EMITTING CORALFLUORESCENT PROTEIN INTO AN EFFICIENT HIGHLIGHTER.
1yjf CYCLIZED POST-TRANSLATIONAL PRODUCT FOR S65A Y66S (GFPHAL)GREEN FLUORESCENT PROTEIN VARIANT
1z1p Y66L VARIANT OF ENHANCED GREEN FLUORESCENT PROTEIN WITH 412-NM ABSORBING CHROMOPHORE
1z1q Y66L VARIANT OF ENHANCED GREEN FLUORESCENT PROTEIN WITH 374-NM ABSORBING CHROMOPHORE
1zgo HIGH RESOLUTION CRYSTAL STRUCTURE OF THE DISCOSOMA REDFLUORESCENT PROTEIN (DSRED)
1zgp CRYSTAL STRUCTURE OF THE DISCOSOMA RED FLUORESCENT PROTEIN(DSRED) VARIANT K70M
1zgq CRYSTAL STRUCTURE OF THE DISCOSOMA RED FLUORESCENT PROTEIN(DSRED) VARIANT Q66M
1zux EOSFP FLUORESCENT PROTEIN- GREEN FORM
2a46 CRYSTAL STRUCTURES OF AMFP486, A CYAN FLUORESCENT PROTEINFROM ANEMONIA MAJANO, AND VARIANTS
2a50 FLUORESCENT PROTEIN ASFP595, WT, OFF-STATE
2a52 FLUORESCENT PROTEIN ASFP595, S158V, ON-STATE
2a53 FLUORESCENT PROTEIN ASFP595, A143S, OFF-STATE
2a54 FLUORESCENT PROTEIN ASFP595, A143S, ON-STATE , 1MINIRRADIATION
2a56 FLUORESCENT PROTEIN ASFP595, A143S, ON-STATE , 5MINIRRADIATION
2b3p CRYSTAL STRUCTURE OF A SUPERFOLDER GREEN FLUORESCENT PROTEIN
2b3q CRYSTAL STRUCTURE OF A WELL-FOLDED VARIANT OF GREENFLUORESCENT PROTEIN
2btj FLUORESCENT PROTEIN EOSFP - RED FORM
2c9i STRUCTURE OF THE FLUORESCENT PROTEIN ASFP499 FROM ANEMONIA SULCATA
2emd GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
2emn GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT
2emo GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT