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(-) Description

Title :  CRYSTAL STRUCTURE OF A COVALENT COMPLEX OF NITROALKANE OXIDASE TRAPPED DURING SUBSTRATE TURNOVER
 
Authors :  A. Nagpal, M. P. Valley, P. F. Fitzpatrick, A. M. Orville
Date :  07 Sep 05  (Deposition) - 01 Feb 06  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Oxidoreductase, N5-Fad Adduct, Flavoenzyme, Nitroalkane, Acyl-Coa Dehydrogenase, Nitrobutyl, Fad, Flavoprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Nagpal, M. P. Valley, P. F. Fitzpatrick, A. M. Orville
Crystal Structures Of Nitroalkane Oxidase: Insights Into The Reaction Mechanism From A Covalent Complex Of The Flavoenzyme Trapped During Turnover.
Biochemistry V. 45 1138 2006
PubMed-ID: 16430210  |  Reference-DOI: 10.1021/BI051966W
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - NITROALKANE OXIDASE
    Atcc: 695
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETNAO4
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: FUSARIUM OXYSPORUM
    Organism Taxid: 5507

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 60)

Asymmetric/Biological Unit (3, 60)
No.NameCountTypeFull Name
1FAD4Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2MSE52Mod. Amino AcidSELENOMETHIONINE
3NBT4Ligand/Ion(2S)-2-NITROBUTANE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:131 , HIS A:133 , SER A:134 , GLY A:138 , THR A:139 , ALA A:140 , ASN A:141 , TRP A:169 , PRO A:170 , SER A:171 , LEU A:400 , PHE A:401 , ASP A:402 , GLY A:403 , GLY A:404 , ILE A:406 , GLY A:407 , ARG A:411 , NBT A:1433 , HOH A:2032 , HOH A:2153 , HOH A:2170 , HOH A:2171 , ARG B:304 , ILE B:310 , HIS B:313 , VAL B:316 , LYS B:375 , ALA B:376 , VAL B:377 , GLY B:378 , MSE B:379 , HOH B:2153 , GLN C:314BINDING SITE FOR RESIDUE FAD A1432
2AC2SOFTWAREVAL A:95 , ALA A:96 , LEU A:99 , SER A:171 , SER A:276 , PHE A:401 , ASP A:402 , FAD A:1432BINDING SITE FOR RESIDUE NBT A1433
3AC3SOFTWAREARG A:304 , ILE A:310 , HIS A:313 , VAL A:316 , LYS A:375 , ALA A:376 , VAL A:377 , GLY A:378 , MSE A:379 , HOH A:2144 , LEU B:99 , LEU B:131 , HIS B:133 , SER B:134 , GLY B:138 , THR B:139 , ALA B:140 , ASN B:141 , TRP B:169 , SER B:171 , LEU B:400 , PHE B:401 , ASP B:402 , GLY B:403 , GLY B:404 , ILE B:406 , GLY B:407 , NBT B:1433 , HOH B:2161 , HOH B:2173 , HOH B:2174 , HOH B:2175 , GLN D:314BINDING SITE FOR RESIDUE FAD B1432
4AC4SOFTWAREILE B:92 , VAL B:95 , ALA B:96 , LEU B:99 , SER B:171 , PHE B:401 , ASP B:402 , FAD B:1432BINDING SITE FOR RESIDUE NBT B1433
5AC5SOFTWAREGLN A:314 , LEU C:131 , HIS C:133 , SER C:134 , GLY C:138 , THR C:139 , ALA C:140 , ASN C:141 , TRP C:169 , SER C:171 , LEU C:400 , PHE C:401 , ASP C:402 , GLY C:403 , GLY C:404 , GLY C:407 , NBT C:1433 , HOH C:2179 , HOH C:2202 , HOH C:2203 , HOH C:2204 , ARG D:304 , ILE D:310 , HIS D:313 , VAL D:316 , LYS D:375 , ALA D:376 , VAL D:377 , GLY D:378 , MSE D:379 , HOH D:2115BINDING SITE FOR RESIDUE FAD C1432
6AC6SOFTWAREVAL C:95 , ALA C:96 , LEU C:99 , SER C:171 , SER C:276 , PHE C:401 , ASP C:402 , FAD C:1432BINDING SITE FOR RESIDUE NBT C1433
7AC7SOFTWAREGLN B:314 , ARG C:304 , ILE C:310 , HIS C:313 , VAL C:316 , LYS C:375 , ALA C:376 , VAL C:377 , GLY C:378 , MSE C:379 , LEU D:131 , HIS D:133 , SER D:134 , GLY D:138 , THR D:139 , ALA D:140 , ASN D:141 , TRP D:169 , SER D:171 , LEU D:400 , PHE D:401 , ASP D:402 , GLY D:403 , GLY D:404 , GLY D:407 , ARG D:411 , NBT D:1433 , HOH D:2137 , HOH D:2139 , HOH D:2140 , HOH D:2141 , HOH D:2142BINDING SITE FOR RESIDUE FAD D1432
8AC8SOFTWAREVAL D:95 , ALA D:96 , LEU D:99 , SER D:171 , PHE D:401 , ASP D:402 , FAD D:1432BINDING SITE FOR RESIDUE NBT D1433

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2C0U)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2C0U)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2C0U)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2C0U)

(-) Exons   (0, 0)

(no "Exon" information available for 2C0U)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:430
 aligned with NAO_FUSOX | Q8X1D8 from UniProtKB/Swiss-Prot  Length:439

    Alignment length:430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431
            NAO_FUSOX     2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMALEDYEPWAATYGS 431
               SCOP domains d2c0ua2 A:2-260 Nitroalkane oxidase                                                                                                                                                                                                                                d2c0ua1 A:261-430 Nitroalkane oxidase                                                                                                                                     - SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh.hhh.hhhh.....hhhhhhhhhhhhhhhhh....hhh..hhh......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhh.......eeee....................eeeee..eeeeeeeee..............eeeeeee..............hhhheeeeee.hhhhh...hhheee...............eeee..eeeehhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhh.....hhhhhhhhhhh..........hhhhhhhhhh.......hhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c0u A   2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTmESLVHESIILEELFAVEPATSITIVATALGLmPVILCDSPSLQEKFLKPFISGEGEPLASLmHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAmSAALVGAmAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEmAmQTKIYTTDVAVECVIDAmKAVGmKSYAKDmSFPRLLNEVmCYPLFDGGNIGLRRRQmQRVmALEDYEPWAATYGS 431
                                    11        21        31        41        51        61        71        81        91       101|      111       121       131|      141       151       161       171       181       191       201       211       221       231       241       251       261       271   |   281 |     291       301       311       321       331       341       351  | |  361       371  |    381    |  391    |  401       411 |   | 421       431
                                                                                               70-MSE                         102-MSE                       132-MSE                                                                                                                                        275-MSE 283-MSE                                                                354-MSE             374-MSE|      |       396-MSE          413-MSE              
                                                                                                                                                                                                                                                                                                                                                                                            356-MSE                379-MSE  |                            417-MSE          
                                                                                                                                                                                                                                                                                                                                                                                                                          386-MSE                                         


Chain B from PDB  Type:PROTEIN  Length:430
 aligned with NAO_FUSOX | Q8X1D8 from UniProtKB/Swiss-Prot  Length:439

    Alignment length:430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431
            NAO_FUSOX     2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMALEDYEPWAATYGS 431
               SCOP domains d2c0ub2 B:2-260 Nitroalkane oxidase                                                                                                                                                                                                                                d2c0ub1 B:261-431 Nitroalkane oxidase                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh.hhh.hhhhhh...hhhhhhhhhhhhhhhhh....hhh..hhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhh.hhhh...............................eeeee..eeeeeeeee...............eeeeee..............hhhheeeeee.hhhhh...hhheeeee.............eeee..eeeehhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhh.....hhhhhhhhhhh..........hhhhhhhhhh.......hhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c0u B   2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTmESLVHESIILEELFAVEPATSITIVATALGLmPVILCDSPSLQEKFLKPFISGEGEPLASLmHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAmSAALVGAmAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEmAmQTKIYTTDVAVECVIDAmKAVGmKSYAKDmSFPRLLNEVmCYPLFDGGNIGLRRRQmQRVmALEDYEPWAATYGS 431
                                    11        21        31        41        51        61        71        81        91       101|      111       121       131|      141       151       161       171       181       191       201       211       221       231       241       251       261       271   |   281 |     291       301       311       321       331       341       351  | |  361       371  |    381    |  391    |  401       411 |   | 421       431
                                                                                               70-MSE                         102-MSE                       132-MSE                                                                                                                                        275-MSE 283-MSE                                                                354-MSE             374-MSE|      |       396-MSE          413-MSE              
                                                                                                                                                                                                                                                                                                                                                                                            356-MSE                379-MSE  |                            417-MSE          
                                                                                                                                                                                                                                                                                                                                                                                                                          386-MSE                                         


Chain C from PDB  Type:PROTEIN  Length:430
 aligned with NAO_FUSOX | Q8X1D8 from UniProtKB/Swiss-Prot  Length:439

    Alignment length:430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431
            NAO_FUSOX     2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMALEDYEPWAATYGS 431
               SCOP domains d2c0uc2 C:2-260 Nitroalkane oxidase                                                                                                                                                                                                                                d2c0uc1 C:261-431 Nitroalkane oxidase                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhh...hhhhhhhhhh...hhhhhhhhhhhhhhhhh....hhh..hhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhhhhhhh.......eeee....................eeee...eeeeeeeee..............eeeeeee..............hhhheeeeee.hhhhh...hhheeeee.............eeee..eeeehhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhh.....hhhhhhhhhhh..........hhhhhhhhhh.......hhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c0u C   2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTmESLVHESIILEELFAVEPATSITIVATALGLmPVILCDSPSLQEKFLKPFISGEGEPLASLmHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAmSAALVGAmAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEmAmQTKIYTTDVAVECVIDAmKAVGmKSYAKDmSFPRLLNEVmCYPLFDGGNIGLRRRQmQRVmALEDYEPWAATYGS 431
                                    11        21        31        41        51        61        71        81        91       101|      111       121       131|      141       151       161       171       181       191       201       211       221       231       241       251       261       271   |   281 |     291       301       311       321       331       341       351  | |  361       371  |    381    |  391    |  401       411 |   | 421       431
                                                                                               70-MSE                         102-MSE                       132-MSE                                                                                                                                        275-MSE 283-MSE                                                                354-MSE             374-MSE|      |       396-MSE          413-MSE              
                                                                                                                                                                                                                                                                                                                                                                                            356-MSE                379-MSE  |                            417-MSE          
                                                                                                                                                                                                                                                                                                                                                                                                                          386-MSE                                         


Chain D from PDB  Type:PROTEIN  Length:430
 aligned with NAO_FUSOX | Q8X1D8 from UniProtKB/Swiss-Prot  Length:439

    Alignment length:430
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431
            NAO_FUSOX     2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMALEDYEPWAATYGS 431
               SCOP domains d2c0ud2 D:2-260 Nitroalkane oxidase                                                                                                                                                                                                                                d2c0ud1 D:261-431 Nitroalkane oxidase                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh.hhhhhhhh.....hhhhhhhhhhhhhhhhh....hhh..hhh......hhhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhh.hhhh.......eeee....................eeeee..eeeeeeeee..............eeeeeee..............hhhheeeeee.hhhhh...hhheeeee.............eeee..eeeehhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhh.....hhhhhhhhhhh..........hhhhhhhhhh.......hhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2c0u D   2 VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTmESLVHESIILEELFAVEPATSITIVATALGLmPVILCDSPSLQEKFLKPFISGEGEPLASLmHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAmSAALVGAmAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEmAmQTKIYTTDVAVECVIDAmKAVGmKSYAKDmSFPRLLNEVmCYPLFDGGNIGLRRRQmQRVmALEDYEPWAATYGS 431
                                    11        21        31        41        51        61        71        81        91       101|      111       121       131|      141       151       161       171       181       191       201       211       221       231       241       251       261       271   |   281 |     291       301       311       321       331       341       351  | |  361       371  |    381    |  391    |  401       411 |   | 421       431
                                                                                               70-MSE                         102-MSE                       132-MSE                                                                                                                                        275-MSE 283-MSE                                                                354-MSE             374-MSE|      |       396-MSE          413-MSE              
                                                                                                                                                                                                                                                                                                                                                                                            356-MSE                379-MSE  |                            417-MSE          
                                                                                                                                                                                                                                                                                                                                                                                                                          386-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2C0U)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2C0U)

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (NAO_FUSOX | Q8X1D8)
molecular function
    GO:0071949    FAD binding    Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
    GO:0003995    acyl-CoA dehydrogenase activity    Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0052664    nitroalkane oxidase activity    Catalysis of the reaction: nitroalkane + H2O + O2 = an aldehyde or ketone + nitrite + H2O2.
    GO:0050141    nitroethane oxidase activity    Catalysis of the reaction: nitroethane + H2O + O2 = acetaldehyde + nitrite + H2O2.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016627    oxidoreductase activity, acting on the CH-CH group of donors    Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0006807    nitrogen compound metabolic process    The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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        NAO_FUSOX | Q8X1D8: 2c12 2reh 2zaf 3d9d 3d9e 3d9f 3d9g 3fcj

(-) Related Entries Specified in the PDB File

2c12 CRYSTAL STRUCTURE OF NITROALKANE OXIDASE IN COMPLEX WITH SPERMINE, A COMPETITIVE INHIBITOR