2AJ7 - JenaLib

Asymmetric Unit (5, 25)

No.	Name	Count	Type	Full Name
1	EDO	12	Ligand/Ion	1,2-ETHANEDIOL
2	FMT	7	Ligand/Ion	FORMIC ACID
3	K	1	Ligand/Ion	POTASSIUM ION
4	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
5	NI	1	Ligand/Ion	NICKEL (II) ION

Biological Unit 1 (3, 23)

No.	Name	Count	Type	Full Name
1	EDO	12	Ligand/Ion	1,2-ETHANEDIOL
2	FMT	7	Ligand/Ion	FORMIC ACID
3	K	-1	Ligand/Ion	POTASSIUM ION
4	MSE	4	Mod. Amino Acid	SELENOMETHIONINE
5	NI	-1	Ligand/Ion	NICKEL (II) ION

Biological Unit 2 (3, 69)

No.	Name	Count	Type	Full Name
1	EDO	36	Ligand/Ion	1,2-ETHANEDIOL
2	FMT	21	Ligand/Ion	FORMIC ACID
3	K	-1	Ligand/Ion	POTASSIUM ION
4	MSE	12	Mod. Amino Acid	SELENOMETHIONINE
5	NI	-1	Ligand/Ion	NICKEL (II) ION

Biological Unit 3 (3, 69)

No.	Name	Count	Type	Full Name
1	EDO	36	Ligand/Ion	1,2-ETHANEDIOL
2	FMT	21	Ligand/Ion	FORMIC ACID
3	K	-1	Ligand/Ion	POTASSIUM ION
4	MSE	12	Mod. Amino Acid	SELENOMETHIONINE
5	NI	-1	Ligand/Ion	NICKEL (II) ION

Sites (21, 21)

Asymmetric Unit (21, 21)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS B:-2 , HIS B:0	BINDING SITE FOR RESIDUE NI B 152
02	AC2	SOFTWARE	ASP B:31 , HOH B:179	BINDING SITE FOR RESIDUE K B 153
03	AC3	SOFTWARE	ASN A:63 , ALA A:92 , ILE A:93 , LYS A:148 , HOH A:250	BINDING SITE FOR RESIDUE EDO A 152
04	AC4	SOFTWARE	PHE A:68 , TYR A:71 , HOH A:226 , HOH A:309	BINDING SITE FOR RESIDUE EDO A 153
05	AC5	SOFTWARE	ASP A:31 , GLU A:32 , LYS A:53 , HOH A:184	BINDING SITE FOR RESIDUE EDO A 154
06	AC6	SOFTWARE	ASN A:109 , ALA A:112 , GLN A:125 , ARG A:135 , HOH A:164 , HOH A:231 , ALA B:28 , GLU B:30	BINDING SITE FOR RESIDUE EDO A 155
07	AC7	SOFTWARE	HIS B:-1 , HIS B:0 , MSE B:1 , GLU B:16 , ASP B:17 , HOH B:191	BINDING SITE FOR RESIDUE EDO B 154
08	AC8	SOFTWARE	GLY B:43 , THR B:44 , FMT B:163 , HOH B:204	BINDING SITE FOR RESIDUE EDO B 155
09	AC9	SOFTWARE	HIS A:-4 , GLU B:88 , VAL B:91 , FMT B:162	BINDING SITE FOR RESIDUE EDO B 156
10	BC1	SOFTWARE	ASN B:63 , VAL B:91 , ALA B:92 , ILE B:93 , PHE B:94 , HOH B:322	BINDING SITE FOR RESIDUE EDO B 157
11	BC2	SOFTWARE	GLU B:13 , ARG B:18 , EDO B:160	BINDING SITE FOR RESIDUE EDO B 158
12	BC3	SOFTWARE	ALA A:28 , GLU A:30 , LEU B:96 , ASN B:109 , ALA B:112 , GLN B:125 , ARG B:135 , HOH B:175 , HOH B:208 , HOH B:231	BINDING SITE FOR RESIDUE EDO B 159
13	BC4	SOFTWARE	SER A:9 , SER B:9 , LEU B:12 , LEU B:38 , PRO B:39 , EDO B:158 , EDO B:161	BINDING SITE FOR RESIDUE EDO B 160
14	BC5	SOFTWARE	PHE A:40 , THR B:6 , LYS B:7 , TYR B:8 , SER B:9 , LEU B:38 , PRO B:39 , THR B:48 , GLN B:50 , ALA B:58 , EDO B:160 , HOH B:332	BINDING SITE FOR RESIDUE EDO B 161
15	BC6	SOFTWARE	THR A:131 , ALA A:132 , TYR A:133 , HOH A:295	BINDING SITE FOR RESIDUE FMT A 156
16	BC7	SOFTWARE	GLY A:43 , THR A:44 , PRO A:45 , SER A:66 , FMT A:158 , HOH A:199 , PHE B:103 , HOH B:271	BINDING SITE FOR RESIDUE FMT A 157
17	BC8	SOFTWARE	ALA A:42 , GLY A:43 , THR A:44 , FMT A:157 , HOH A:209	BINDING SITE FOR RESIDUE FMT A 158
18	BC9	SOFTWARE	ALA A:58 , PHE A:59 , FMT A:160 , HOH A:203 , HOH A:296	BINDING SITE FOR RESIDUE FMT A 159
19	CC1	SOFTWARE	PHE A:59 , ILE A:60 , LEU A:97 , FMT A:159	BINDING SITE FOR RESIDUE FMT A 160
20	CC2	SOFTWARE	HIS A:-2 , MSE A:1 , THR B:86 , ASN B:87 , EDO B:156	BINDING SITE FOR RESIDUE FMT B 162
21	CC3	SOFTWARE	PHE A:103 , GLY B:43 , THR B:44 , PRO B:45 , SER B:66 , EDO B:155 , HOH B:199 , HOH B:250	BINDING SITE FOR RESIDUE FMT B 163

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:157
 aligned with FLIW_BACHD | Q9K6V7 from UniProtKB/Swiss-Prot  Length:151

    Alignment length:157
                                     1                                                                                                                                                   
                                     1        11        21        31        41        51        61        71        81        91       101       111       121       131       141       
           FLIW_BACHD     - ---------MKVIETKYNGKLEVAEDRLIAFDQGIPAFEDEKEFVLLPFEEGTPYYTLQSTKTVDLAFIIVNPFSFFPEYRVKLPEATIVQLNITNENDVAIFSLLTVKEPFSETTVNLQAPIVINANKQMGKQLVLGDTAYDRKQPLFQKELVLAK 148
               SCOP domains ---------d2aj7a1 A:1-148 Hypothetical protein BH3618                                                                                                          SCOP domains
               CATH domains 2aj7A00 A:-8-148 BH3618-like                                                                                                                                  CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeeee...eeeeee...eee............eeeeee......eeeeee......eeeee.hhhh........hhhhhhhh...hhh.eeeeeeee...hhhh.ee.....eeee....eeee...........ee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2aj7 A  -8 DKIHHHHHHmKVIETKYSGKLEVAEDRLIAFDQGIPAFEDEKEFVLLPFAAGTPYYTLQSTKTVDLAFIIVNPFSFFPEYRVKLPEATIAQLNITNENDVAIFSLLTVKEPFSETTVNLQAPIVINANKQmGKQLVLGDTAYNRKQPLFQKELVLAK 148
                                     1        11        21        31        41        51        61        71        81        91       101       111       121|      131       141       
                                     1-MSE                                                                                                                  122-MSE

Chain B from PDB  Type:PROTEIN  Length:149
 aligned with FLIW_BACHD | Q9K6V7 from UniProtKB/Swiss-Prot  Length:151

    Alignment length:149
                               1                                                                                                                                                 
                               |     7        17        27        37        47        57        67        77        87        97       107       117       127       137         
           FLIW_BACHD     - ---MKVIETKYNGKLEVAEDRLIAFDQGIPAFEDEKEFVLLPFEEGTPYYTLQSTKTVDLAFIIVNPFSFFPEYRVKLPEATIVQLNITNENDVAIFSLLTVKEPFSETTVNLQAPIVINANKQMGKQLVLGDTAYDRKQPLFQKELVL 146
               SCOP domains d2aj7b_ B: Hypothetical protein BH3618                                                                                                                SCOP domains
               CATH domains 2aj7B00 B:-2-146 BH3618-like                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee...eeeeee...eee............eeeeee......eeeeee......eeeee.hhhh........hhhhhhhh...hhh.eeeeeeee...hhhh.ee.....eeee....eeee...........ee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2aj7 B  -2 HHHmKVIETKYSGKLEVAEDRLIAFDQGIPAFEDEKEFVLLPFAAGTPYYTLQSTKTVDLAFIIVNPFSFFPEYRVKLPEATIAQLNITNENDVAIFSLLTVKEPFSETTVNLQAPIVINANKQmGKQLVLGDTAYNRKQPLFQKELVL 146
                               |     7        17        27        37        47        57        67        77        87        97       107       117    |  127       137         
                               1-MSE                                                                                                                  122-MSE

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	-	→ Gap	(green background, '-', border residues have a numbering label)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (0, 0)

Gene Ontology (3, 3)

Asymmetric Unit(hide GO term definitions)

Chain A,B (FLIW_BACHD | Q9K6V7)

biological process
	GO:0044780	bacterial-type flagellum assembly	The assembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.
	GO:0044781	bacterial-type flagellum organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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		Glu A:101 - Pro A:102	[ RasMol ]
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	2aj7
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 25)