| molecular function |
|---|
| | GO:0000175 | | 3'-5'-exoribonuclease activity | | Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule. |
| | GO:0005524 | | ATP binding | | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
| | GO:1990380 | | Lys48-specific deubiquitinase activity | | Hydrolysis of Lys48-linked ubiquitin unit(s) from a ubiquitinated protein. |
| | GO:0003723 | | RNA binding | | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
| | GO:0003968 | | RNA-directed 5'-3' RNA polymerase activity | | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); uses an RNA template, i.e. the catalysis of RNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. |
| | GO:0004197 | | cysteine-type endopeptidase activity | | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
| | GO:0008234 | | cysteine-type peptidase activity | | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
| | GO:0003725 | | double-stranded RNA binding | | Interacting selectively and non-covalently with double-stranded RNA. |
| | GO:0004519 | | endonuclease activity | | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. |
| | GO:0004527 | | exonuclease activity | | Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end. |
| | GO:0016896 | | exoribonuclease activity, producing 5'-phosphomonoesters | | Catalysis of the hydrolysis of ester linkages within ribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters. |
| | GO:0004386 | | helicase activity | | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix. |
| | GO:0016787 | | hydrolase activity | | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
| | GO:0016817 | | hydrolase activity, acting on acid anhydrides | | Catalysis of the hydrolysis of any acid anhydride. |
| | GO:0016788 | | hydrolase activity, acting on ester bonds | | Catalysis of the hydrolysis of any ester bond. |
| | GO:0004482 | | mRNA (guanine-N7-)-methyltransferase activity | | Catalysis of the reaction: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA. m7G(5')pppR-RNA is mRNA containing an N7-methylguanine cap; R may be guanosine or adenosine. |
| | GO:0004483 | | mRNA (nucleoside-2'-O-)-methyltransferase activity | | Catalysis of the reaction: S-adenosyl-L-methionine + m7G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppRm-RNA. R may be guanosine or adenosine. |
| | GO:0046872 | | metal ion binding | | Interacting selectively and non-covalently with any metal ion. |
| | GO:0008168 | | methyltransferase activity | | Catalysis of the transfer of a methyl group to an acceptor molecule. |
| | GO:0004518 | | nuclease activity | | Catalysis of the hydrolysis of ester linkages within nucleic acids. |
| | GO:0003676 | | nucleic acid binding | | Interacting selectively and non-covalently with any nucleic acid. |
| | GO:0000166 | | nucleotide binding | | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. |
| | GO:0016779 | | nucleotidyltransferase activity | | Catalysis of the transfer of a nucleotidyl group to a reactant. |
| | GO:0008242 | | omega peptidase activity | | Catalysis of the removal of terminal peptide residues that are substituted, cyclized or linked by isopeptide bonds (peptide linkages other than those of alpha-carboxyl to alpha-amino groups). |
| | GO:0008233 | | peptidase activity | | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. |
| | GO:0003727 | | single-stranded RNA binding | | Interacting selectively and non-covalently with single-stranded RNA. |
| | GO:0036459 | | thiol-dependent ubiquitinyl hydrolase activity | | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
| | GO:0016740 | | transferase activity | | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. |
| | GO:0008270 | | zinc ion binding | | Interacting selectively and non-covalently with zinc (Zn) ions. |
| biological process |
|---|
| | GO:0006370 | | 7-methylguanosine mRNA capping | | Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript. |
| | GO:0036265 | | RNA (guanine-N7)-methylation | | The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an RNA molecule. |
| | GO:0090503 | | RNA phosphodiester bond hydrolysis, exonucleolytic | | The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides. |
| | GO:0030683 | | evasion or tolerance by virus of host immune response | | Any process, either active or passive, by which a virus avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
| | GO:0039595 | | induction by virus of catabolism of host mRNA | | The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA). |
| | GO:0039520 | | induction by virus of host autophagy | | Any process in which a virus activates or increases the frequency, rate or extent of autophagy in the host. |
| | GO:0080009 | | mRNA methylation | | The posttranscriptional addition of methyl groups to specific residues in an mRNA molecule. |
| | GO:0032259 | | methylation | | The process in which a methyl group is covalently attached to a molecule. |
| | GO:0039519 | | modulation by virus of host autophagy | | Any process in which a virus effect a change in the frequency, rate or extent of autophagy in the host. |
| | GO:0039648 | | modulation by virus of host protein ubiquitination | | Any process in which a virus modulates the frequency, rate or extent of protein ubiquitination in the host organism. Ubiquitination is the process in which one or more ubiquitin groups are added to a protein. |
| | GO:0090305 | | nucleic acid phosphodiester bond hydrolysis | | The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis. |
| | GO:2000158 | | positive regulation of ubiquitin-specific protease activity | | Any process that activates or increases the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity. |
| | GO:0039690 | | positive stranded viral RNA replication | | A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA. |
| | GO:0071108 | | protein K48-linked deubiquitination | | A protein deubiquitination process in which a K48-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is removed from a protein. |
| | GO:0006508 | | proteolysis | | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
| | GO:0039549 | | suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation | | Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes. |
| | GO:0039579 | | suppression by virus of host ISG15 activity | | Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host ubiquitin-like protein ISG15 activity. ISG15 is a ubiquitin-like protein that is conjugated to lysine residues on various target proteins. Viruses escape from the antiviral activity of ISG15 by using different mechanisms; the influenza B virus NS1 protein for instance blocks the covalent linkage of ISG15 to its target proteins by directly interacting with ISG15. The papain-like protease from the coronavirus cleaves ISG15 derivatives. |
| | GO:0039644 | | suppression by virus of host NF-kappaB transcription factor activity | | Any process in which a virus stops, prevents, or reduces the activity of host NF-kappaB activity. |
| | GO:0039657 | | suppression by virus of host gene expression | | Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of gene expression in the host organism. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. |
| | GO:0039503 | | suppression by virus of host innate immune response | | Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the innate immune response of the host organism, the host's first line of defense. |
| | GO:0039604 | | suppression by virus of host translation | | Any process in which a virus prevents or reduces the frequency, rate or extent of translation of host mRNA. |
| | GO:0039502 | | suppression by virus of host type I interferon-mediated signaling pathway | | Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of type I interferon-mediated signaling in the host organism. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families. |
| | GO:0006351 | | transcription, DNA-templated | | The cellular synthesis of RNA on a template of DNA. |
| | GO:0001172 | | transcription, RNA-templated | | The cellular synthesis of RNA on a template of RNA. |
| | GO:0039694 | | viral RNA genome replication | | The replication of a viral RNA genome. |
| | GO:0019079 | | viral genome replication | | Any process involved directly in viral genome replication, including viral nucleotide metabolism. |
| | GO:0016032 | | viral process | | A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle. |
| | GO:0019082 | | viral protein processing | | Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a viral protein. |
| | GO:0019083 | | viral transcription | | The process by which a viral genome, or part of a viral genome, is transcribed within the host cell. |
| cellular component |
|---|
| | GO:0030430 | | host cell cytoplasm | | The cytoplasm of a host cell. |
| | GO:0044172 | | host cell endoplasmic reticulum-Golgi intermediate compartment | | A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport. |
| | GO:0033644 | | host cell membrane | | Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
| | GO:0044220 | | host cell perinuclear region of cytoplasm | | The host cell cytoplasm situated near, or occurring around, the host nucleus. |
| | GO:0016021 | | integral component of membrane | | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
| | GO:0016020 | | membrane | | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Description
