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(-) Description

Title :  CRYSTAL STRUCTURE OF A DUF72 FAMILY PROTEIN (EF0366) FROM ENTEROCOCCUS FAECALIS V583 AT 3.10 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  27 May 05  (Deposition) - 14 Jun 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Tim Alpha/Beta Barrel Fold, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of (29342463) From Enterococcus Faecalis V583 At 3. 10 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: 29342463
    Organism Scientific: ENTEROCOCCUS FAECALIS
    Organism Taxid: 226185
    Strain: V583

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN B:108 , ARG B:140BINDING SITE FOR RESIDUE CL B 278

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1ZTV)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1ZTV)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1ZTV)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1ZTV)

(-) Exons   (0, 0)

(no "Exon" information available for 1ZTV)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:279
 aligned with Q838R9_ENTFA | Q838R9 from UniProtKB/TrEMBL  Length:277

    Alignment length:279
                                1                                                                                                                                                                                                                                                                                  
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266         
         Q838R9_ENTFA     - ----MIRLGLTSFSEHDYLTGKKRSTLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTFGCTKENVAYLQKIRHWFKDLPIAIELRNNSWYQPNFVKQMLQFMKENQFSLVIVDEPQIPTNPVPFYPYVTNPNLVLFRFHGRNAAGWLANDAEWRKKRTLYHYNTQEIADLSEAVLKMSQEAKEVGVIFNNNSGGDAAENALQMQKVLNLSYDDLNPKQLD 275
               SCOP domains d1ztva_ A: automated matches                                                                                                                                                                                                                                                            SCOP domains
               CATH domains 1ztvA00 A:-3-275 Hypothetical protein tm1631.                                                                                                                                                                                                                                           CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee....hhhhhh....hhhhhh....eeeehhhhhh..hhhhhhhhhhh.....eeeee.........hhhhh..hhhhhhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhhh....eeee..hhhhhh..hhhhhhhhhhhh..ee.eee....................eeeee.............hhhhhh.....hhhhhhhhhhhhhhhhhhh.eeeeee......hhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ztv A  -3 HHHHMIRLGLTSFSEHDYLTGKKRSTLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTFGCTKENVAYLQKIRHWFKDLPIAIELRNNSWYQPNFVKQMLQFMKENQFSLVIVDEPQIPTNPVPFYPYVTNPNLVLFRFHGRNAAGWLANDAEWRKKRTLYHYNTQEIADLSEAVLKMSQEAKEVGVIFNNNSGGDAAENALQMQKVLNLSYDDLNPKQLD 275
                                     6        16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266         


Chain B from PDB  Type:PROTEIN  Length:275
 aligned with Q838R9_ENTFA | Q838R9 from UniProtKB/TrEMBL  Length:277

    Alignment length:275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270     
         Q838R9_ENTFA     1 MIRLGLTSFSEHDYLTGKKRSTLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTFGCTKENVAYLQKIRHWFKDLPIAIELRNNSWYQPNFVKQMLQFMKENQFSLVIVDEPQIPTNPVPFYPYVTNPNLVLFRFHGRNAAGWLANDAEWRKKRTLYHYNTQEIADLSEAVLKMSQEAKEVGVIFNNNSGGDAAENALQMQKVLNLSYDDLNPKQLD 275
               SCOP domains d1ztvb_ B: automated matches                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1ztvB00 B:1-275 Hypothetical protein tm1631.                                                                                                                                                                                                                                        CATH domains
           Pfam domains (1) -------------DUF72-1ztvB01 B:14-262                                                                                                                                                                                                                                   ------------- Pfam domains (1)
           Pfam domains (2) -------------DUF72-1ztvB02 B:14-262                                                                                                                                                                                                                                   ------------- Pfam domains (2)
         Sec.struct. author .eeeeee....hhhhhh....hhhhhh....eeeehhhhhh..hhhhhhhhhhhh....eeeee.........hhhhh..hhhhhhhhhhhhhhhhhhh..eeeeeee.......hhhhhhhhhhhhhhh....eeee.......hhhhhhhhhhhhhhh..ee.eee...................eeeeee.............hhhhhh.....hhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1ztv B   1 MIRLGLTSFSEHDYLTGKKRSTLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQTYYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTFGCTKENVAYLQKIRHWFKDLPIAIELRNNSWYQPNFVKQMLQFMKENQFSLVIVDEPQIPTNPVPFYPYVTNPNLVLFRFHGRNAAGWLANDAEWRKKRTLYHYNTQEIADLSEAVLKMSQEAKEVGVIFNNNSGGDAAENALQMQKVLNLSYDDLNPKQLD 275
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: DUF72] (3)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 1ZTV)

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  1ztv
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q838R9_ENTFA | Q838R9: 1vpy

(-) Related Entries Specified in the PDB File

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