1ZHO | PR0157 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   THE STRUCTURE OF A RIBOSOMAL PROTEIN L1 IN COMPLEX WITH MRNA

Authors :   N. Nevskaya, S. Tishchenko, S. Volchkov, V. Kljashtorny, E. Nikonova, O. Nikonov, A. Nikulin, C. Kohrer, W. Piendl, R. Zimmermann, P. Stockley, M. Garber, S. Nikonov

Date :   26 Apr 05 (Deposition) - 09 May 06 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.60

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)

Keywords :   Ribosome, Ribosomal Protein, Mrna-Protein Complex, L1, Regulation Of Gene Expression, Rna-Protein Interaction, Structural Protein/Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   N. Nevskaya, S. Tishchenko, S. Volchkov, V. Kljashtorny, E. Nikonova, O. Nikonov, A. Nikulin, C. Kohrer, W. Piendl, R. Zimmermann, P. Stockley, M. Garber, S. Nikonov
New Insights Into The Interaction Of Ribosomal Protein L1 With Rna.
J. Mol. Biol. V. 355 747 2006
PubMed-ID: 16330048 | Reference-DOI: 10.1016/J.JMB.2005.10.084
(for further references see the PDB file header)

Molecule 1 - MRNA
	Chains	:	B, D, F, H
	Engineered	:	YES
	Other Details	:	SYNTHESIS OF THE RNA FRAGMENT FROM THE PLASMID PUC18, SEQUENCE FROM CELL-FREE (IN VITRO) SYSTEM WITHOUT LIVING ORGANISM
	Synthetic	:	YES

Molecule 2 - 50S RIBOSOMAL PROTEIN L1
	Chains	:	A, C, E, G
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PACA-L1
	Expression System Strain	:	B834(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	RPLA, RPL1
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 16)

No.	Name	Count	Type	Full Name
1	K	4	Ligand/Ion	POTASSIUM ION
2	MSE	12	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	K	-1	Ligand/Ion	POTASSIUM ION
2	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (1, 3)

No.	Name	Count	Type	Full Name
1	K	-1	Ligand/Ion	POTASSIUM ION
2	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 3 (1, 3)

No.	Name	Count	Type	Full Name
1	K	-1	Ligand/Ion	POTASSIUM ION
2	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 4 (1, 3)

No.	Name	Count	Type	Full Name
1	K	-1	Ligand/Ion	POTASSIUM ION
2	MSE	3	Mod. Amino Acid	SELENOMETHIONINE

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU C:42 , THR C:216 , THR C:217 , U D:30 , U D:31	BINDING SITE FOR RESIDUE K D 39
2	AC2	SOFTWARE	GLU A:42 , THR A:216 , THR A:217 , U B:30 , U B:31	BINDING SITE FOR RESIDUE K A 229
3	AC3	SOFTWARE	GLU G:42 , THR G:216 , THR G:217 , U H:30 , U H:31	BINDING SITE FOR RESIDUE K H 39
4	AC4	SOFTWARE	GLU E:42 , THR E:216 , THR E:217 , U F:30 , U F:31	BINDING SITE FOR RESIDUE K E 229

(no "SS Bond" information available for 1ZHO)

(no "Cis Peptide Bond" information available for 1ZHO)

(no "SAP(SNP)/Variant" information available for 1ZHO)

Asymmetric Unit (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIBOSOMAL_L1	PS01199	Ribosomal protein L1 signature.	RL1_THETH	121-140	4	A:120-139 C:120-139 E:120-139 G:120-139

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIBOSOMAL_L1	PS01199	Ribosomal protein L1 signature.	RL1_THETH	121-140	1	A:120-139 - - -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIBOSOMAL_L1	PS01199	Ribosomal protein L1 signature.	RL1_THETH	121-140	1	- C:120-139 - -

Biological Unit 3 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIBOSOMAL_L1	PS01199	Ribosomal protein L1 signature.	RL1_THETH	121-140	1	- - E:120-139 -

Biological Unit 4 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RIBOSOMAL_L1	PS01199	Ribosomal protein L1 signature.	RL1_THETH	121-140	1	- - - G:120-139

(no "Exon" information available for 1ZHO)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:228
 aligned with RL1_THETH | P27150 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:228
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221        
            RL1_THETH     2 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS 229
               SCOP domains ----d1zhoa1 A:5-228 Ribosomal protein L1                                                                                                                                                                                             SCOP domains
               CATH domains --------------1zhoA01 A:15-66,A:160-228                           1zhoA02 A:67-159  [code=3.40.50.790, no name defined]                                        1zhoA01 A:15-66,A:160-228  [code=3.30.190.20, no name defined]        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhh......hhhhhhhhhhhhh......eeeeeeee.....hhhhh.eeeee..........eeee...hhhhhhhhhh..eee.hhhhhhhh.......eeee...hhhhhhhhhhhhhh...............hhhhhhhhhh..eeeee.....eeeeeeee...hhhhhhhhhhhhhhhhhh..........eeeeeeee....eee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L1        ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1zho A   1 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWmDFDAVVATPDVmGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTmGPSVRINPHS 228
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                                                                                                                                     108-MSE     120-MSE                                                                                           218-MSE

Chain B from PDB  Type:RNA  Length:38
                                                                      
                 1zho B   1 GGGAGUGAAGGAGGCUUCGGCCGCGAAACUUCACUCCC  38
                                    10        20        30

Chain C from PDB  Type:PROTEIN  Length:228
 aligned with RL1_THETH | P27150 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:228
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221        
            RL1_THETH     2 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS 229
               SCOP domains ----d1zhoc1 C:5-228 Ribosomal protein L1                                                                                                                                                                                             SCOP domains
               CATH domains --------------1zhoC01 C:15-66,C:160-228                           1zhoC02 C:67-159  [code=3.40.50.790, no name defined]                                        1zhoC01 C:15-66,C:160-228  [code=3.30.190.20, no name defined]        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhh.....ee..hhhhhhhhhhh......eeeeeeee.....hhhhh.eeeee..........eeee........hhhhh..eee.hhhhhhhhh......eeee.hhhhhhhhh.............hhhhh....hhhhhhhhhhh.eeeee.....eeeeeeee...hhhhhhhhhhhhhhhhhhhh........eeeeeeee.....eee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L1        ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1zho C   1 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWmDFDAVVATPDVmGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTmGPSVRINPHS 228
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                                                                                                                                     108-MSE     120-MSE                                                                                           218-MSE

Chain D from PDB  Type:RNA  Length:38
                                                                      
                 1zho D   1 GGGAGUGAAGGAGGCUUCGGCCGCGAAACUUCACUCCC  38
                                    10        20        30

Chain E from PDB  Type:PROTEIN  Length:228
 aligned with RL1_THETH | P27150 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:228
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221        
            RL1_THETH     2 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS 229
               SCOP domains ----d1zhoe1 E:5-228 Ribosomal protein L1                                                                                                                                                                                             SCOP domains
               CATH domains --------------1zhoE01 E:15-66,E:160-228                           1zhoE02 E:67-159  [code=3.40.50.790, no name defined]                                        1zhoE01 E:15-66,E:160-228  [code=3.30.190.20, no name defined]        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhh...........hhhhhhhhhh.......eeeeeeee.....hhhhh.eeeee..........eeee...hhhhhhhhhh..eeehhhhhhhhhh......eeee...hhhhhhhhhhhh........hhhhh....hhhhhhhhhhh.eeeee.....eeeeeeee...hhhhhhhhhhhhhhhhhhh.........eeeeeeee....ee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L1        ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1zho E   1 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWmDFDAVVATPDVmGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTmGPSVRINPHS 228
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                                                                                                                                     108-MSE     120-MSE                                                                                           218-MSE

Chain F from PDB  Type:RNA  Length:38
                                                                      
                 1zho F   1 GGGAGUGAAGGAGGCUUCGGCCGCGAAACUUCACUCCC  38
                                    10        20        30

Chain G from PDB  Type:PROTEIN  Length:228
 aligned with RL1_THETH | P27150 from UniProtKB/Swiss-Prot  Length:229

    Alignment length:228
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221        
            RL1_THETH     2 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS 229
               SCOP domains ----d1zhog1 G:5-228 Ribosomal protein L1                                                                                                                                                                                             SCOP domains
               CATH domains --------------1zhoG01 G:15-66,G:160-228                           1zhoG02 G:67-159  [code=3.40.50.790, no name defined]                                        1zhoG01 G:15-66,G:160-228  [code=3.30.190.20, no name defined]        CATH domains
           Pfam domains (1) -------Ribosomal_L1-1zhoG01 G:8-221                                                                                                                                                                                          ------- Pfam domains (1)
           Pfam domains (2) -------Ribosomal_L1-1zhoG02 G:8-221                                                                                                                                                                                          ------- Pfam domains (2)
           Pfam domains (3) -------Ribosomal_L1-1zhoG03 G:8-221                                                                                                                                                                                          ------- Pfam domains (3)
           Pfam domains (4) -------Ribosomal_L1-1zhoG04 G:8-221                                                                                                                                                                                          ------- Pfam domains (4)
         Sec.struct. author ...hhhhhhhhhhh......hhhhhhhhhhhh.......eeeeeeee.....hhhhh.eeee...........eeee..hhhhhhhhhh...eeehhhhhhhhhhh.....eeee.hhhh..................hhhhh....hhhhhhhhhhh..eeee.....eeeeeeee...hhhhhhhhhhhhhhhhhh..........eeeeeeee....eee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------RIBOSOMAL_L1        ----------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1zho G   1 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWmDFDAVVATPDVmGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTmGPSVRINPHS 228
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                                                                                                                                     108-MSE     120-MSE                                                                                           218-MSE

Chain H from PDB  Type:RNA  Length:38
                                                                      
                 1zho H   1 GGGAGUGAAGGAGGCUUCGGCCGCGAAACUUCACUCCC  38
                                    10        20        30

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Multi-domain proteins (alpha and beta) (2421)

Fold: Ribosomal protein L1 (18)

Superfamily: Ribosomal protein L1 (18)

Family: Ribosomal protein L1 (18)

Protein domain: Ribosomal protein L1 (18)

Thermus thermophilus [TaxId: 274] (13)

1a	d1zhoa1	A:5-228
1b	d1zhoc1	C:5-228
1c	d1zhoe1	E:5-228
1d	d1zhog1	G:5-228

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 2-Layer Sandwich (8480)

Topology: Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase (42)

Homologous Superfamily: [code=3.30.190.20, no name defined] (7)

[unclassified] (3)

1a	1zhoA01	A:15-66,A:160-228
1b	1zhoC01	C:15-66,C:160-228
1c	1zhoE01	E:15-66,E:160-228
1d	1zhoG01	G:15-66,G:160-228

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.790, no name defined] (7)

[unclassified] (3)

2a	1zhoA02	A:67-159
2b	1zhoC02	C:67-159
2c	1zhoE02	E:67-159
2d	1zhoG02	G:67-159

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Ribosome_L1 (7)

Family: Ribosomal_L1 (7)

Thermus thermophilus (4)

1a	Ribosomal_L1-1zhoG01	G:8-221
1b	Ribosomal_L1-1zhoG02	G:8-221
1c	Ribosomal_L1-1zhoG03	G:8-221
1d	Ribosomal_L1-1zhoG04	G:8-221

Asymmetric Unit(hide GO term definitions)

Chain A,C,E,G (RL1_THETH | P27150)

molecular function
	GO:0003723	RNA binding	Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
	GO:0019843	rRNA binding	Interacting selectively and non-covalently with ribosomal RNA.
	GO:0003735	structural constituent of ribosome	The action of a molecule that contributes to the structural integrity of the ribosome.
	GO:0000049	tRNA binding	Interacting selectively and non-covalently with transfer RNA.
biological process
	GO:0006417	regulation of translation	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.
	GO:0006412	translation	The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
	GO:0030529	intracellular ribonucleoprotein complex	An intracellular macromolecular complex containing both protein and RNA molecules.
	GO:0015934	large ribosomal subunit	The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
	GO:0005840	ribosome	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Asymmetric Unit
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1dwu	STRUCTURE OF RIBOSOMAL PROTEIN L1 FROM METHANOCOCCUS THERMOLITHOTROPHICUS
1i2a	CRYSTAL STRUCTURE OF L1 RIBOSOMAL PROTEIN FROM METHANOCOCCUS JANNASCHII WITH 1.85A RESOLUTION
1mzp	STRUCTURE OF THE L1 PROTUBERANCE IN THE RIBOSOME
1u63	THE STRUCTURE OF A RIBOSOMAL PROTEIN L1-MRNA COMPLEX

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 16)

Sites (4, 4)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 4)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (2, 8)

Pfam Domains (1, 4)

Gene Ontology (9, 9)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File