1Z5H - JenaLib

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Asymmetric Unit (Jmol Viewer)

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Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURES OF THE TRICORN INTERACTING FACTOR F3 FROM THERMOPLASMA ACIDOPHILUM

Authors :   O. J. P. Kyrieleis, P. Goettig, R. Kiefersauer, R. Huber, H. Brandstetter

Date :   18 Mar 05 (Deposition) - 28 Jun 05 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: A (2x),B (2x)
Biol. Unit 4: A (1x),B (1x)

Keywords :   Zinc Aminopeptidase, Gluzicins, Tricorn Protease, Superhelix, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   O. J. P. Kyrieleis, P. Goettig, R. Kiefersauer, R. Huber, H. Brandstetter
Crystal Structures Of The Tricorn Interacting Factor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations
J. Mol. Biol. V. 349 787 2005
PubMed-ID: 15893768 | Reference-DOI: 10.1016/J.JMB.2005.03.070
(for further references see the PDB file header)

Molecule 1 - TRICORN PROTEASE INTERACTING FACTOR F3
	Chains	:	A, B
	EC Number	:	3.4.11.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PRSET6C
	Expression System Strain	:	BL21(DE3)RIL
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	THERMOPLASMA ACIDOPHILUM
	Organism Taxid	:	2303

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (2x)	:	A (2x)	B (2x)
Biological Unit 4 (1x)	:	A (1x)	B (1x)

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 19)

No.	Name	Count	Type	Full Name
1	SO4	17	Ligand/Ion	SULFATE ION
2	ZN	2	Ligand/Ion	ZINC ION

Biological Unit 1 (1, 13)

No.	Name	Count	Type	Full Name
1	SO4	13	Ligand/Ion	SULFATE ION
2	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (1, 4)

No.	Name	Count	Type	Full Name
1	SO4	4	Ligand/Ion	SULFATE ION
2	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 3 (1, 26)

No.	Name	Count	Type	Full Name
1	SO4	26	Ligand/Ion	SULFATE ION
2	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 4 (1, 13)

No.	Name	Count	Type	Full Name
1	SO4	13	Ligand/Ion	SULFATE ION
2	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (19, 19)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:708 , ARG A:711 , ARG A:715 , HOH A:2081 , HOH A:2261 , HOH A:2404	BINDING SITE FOR RESIDUE SO4 A 1001
02	AC2	SOFTWARE	LYS A:677 , THR A:718 , HOH A:2342 , HOH A:2433	BINDING SITE FOR RESIDUE SO4 A 1002
03	AC3	SOFTWARE	TYR A:409 , ARG A:444 , TYR B:172 , TYR B:174 , HOH B:2118	BINDING SITE FOR RESIDUE SO4 A 1003
04	AC4	SOFTWARE	ASP B:7 , THR B:22 , GLU B:23 , THR B:24 , GLU B:72 , HOH B:2018	BINDING SITE FOR RESIDUE SO4 B 1004
05	AC5	SOFTWARE	THR A:559 , HIS A:560 , HOH A:2143 , SER B:602	BINDING SITE FOR RESIDUE SO4 A 1005
06	AC6	SOFTWARE	TYR A:194 , LYS A:256 , ARG A:257 , PHE A:303	BINDING SITE FOR RESIDUE SO4 A 1006
07	AC7	SOFTWARE	PRO A:505 , ARG A:508	BINDING SITE FOR RESIDUE SO4 A 1007
08	AC8	SOFTWARE	PHE A:516 , GLY A:550	BINDING SITE FOR RESIDUE SO4 A 1008
09	AC9	SOFTWARE	LYS A:677 , LYS A:682 , PHE A:717 , HOH A:2102 , HOH A:2322	BINDING SITE FOR RESIDUE SO4 A 1009
10	BC1	SOFTWARE	GLU A:440 , SER A:521 , GLY A:522 , HIS A:523 , HOH A:2039 , HOH A:2120 , HOH A:2210 , LYS B:140 , ARG B:141	BINDING SITE FOR RESIDUE SO4 A 1010
11	BC2	SOFTWARE	TYR A:174 , TYR B:409 , ASN B:413 , PRO B:414 , ARG B:444 , TRP B:445 , HOH B:2031 , HOH B:2125 , HOH B:2207	BINDING SITE FOR RESIDUE SO4 B 1011
12	BC3	SOFTWARE	VAL B:112 , TYR B:117 , HOH B:2085	BINDING SITE FOR RESIDUE SO4 B 1012
13	BC4	SOFTWARE	SER A:602 , THR B:559 , HIS B:560 , ALA B:561	BINDING SITE FOR RESIDUE SO4 B 1013
14	BC5	SOFTWARE	LYS A:140 , ARG A:141 , GLU A:151 , SO4 A:1015	BINDING SITE FOR RESIDUE SO4 A 1014
15	BC6	SOFTWARE	LYS A:140 , SO4 A:1014 , HOH B:2308	BINDING SITE FOR RESIDUE SO4 A 1015
16	BC7	SOFTWARE	LYS A:580 , GLN A:581 , ASP A:582 , HOH A:2391	BINDING SITE FOR RESIDUE SO4 A 1016
17	BC8	SOFTWARE	ARG A:648 , ASP A:649 , GLU A:650	BINDING SITE FOR RESIDUE SO4 A 1017
18	BC9	SOFTWARE	HIS A:265 , HIS A:269 , GLU A:288 , HOH A:2440	BINDING SITE FOR RESIDUE ZN A 2001
19	CC1	SOFTWARE	HIS B:265 , GLU B:266 , HIS B:269 , GLU B:288	BINDING SITE FOR RESIDUE ZN B 2002

(no "SS Bond" information available for 1Z5H)

(no "Cis Peptide Bond" information available for 1Z5H)

(no "SAP(SNP)/Variant" information available for 1Z5H)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	TRF3_THEAC	262-271	2	A:262-271 B:262-271

Biological Unit 1 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	TRF3_THEAC	262-271	1	A:262-271 -

Biological Unit 2 (1, 1)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	TRF3_THEAC	262-271	1	- B:262-271

Biological Unit 3 (1, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	TRF3_THEAC	262-271	4	A:262-271 B:262-271

Biological Unit 4 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ZINC_PROTEASE	PS00142	Neutral zinc metallopeptidases, zinc-binding region signature.	TRF3_THEAC	262-271	2	A:262-271 B:262-271

(no "Exon" information available for 1Z5H)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:780
 aligned with TRF3_THEAC | O93655 from UniProtKB/Swiss-Prot  Length:780

    Alignment length:780
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780
           TRF3_THEAC     1 MEVEKYDLTLDFDIQKRTFNGTETITADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQTVRAPGDSQPQKIEISFAGKVSDSLSGIYYAGRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNGEEEGRWPVPVNIKKKDGVERILLEDEASIEADGLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQTAVK 780
               SCOP domains d1z5ha1 A:1-170 Tricorn protease interacting factor F3 N-terminal domain                                                                                                  d1z5ha2 A:171-414 Tricorn protease interacting factor F3 catalytic domain                                                                                                                                                                           d1z5ha3 A:415-489 Tricorn protease interacting factor F3 insert domain     d1z5ha4 A:490-780 Tricorn protease interacting factor F3 C-terminal domain                                                                                                                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeee....eeeeeeeeee....eeee....eeeeeee..ee...ee...eeee......eeeeeeeeee......eeeee.....eeeee....hhhhh...........eeeeeeee....eeee...eeeeee...eeeee......hhhhh.eeee..eeeeeee..eeeeeee......hhhhhhhhhhhhhhhhhhh......eeeeeee......ee....eeeeehhhhh.....hhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh......................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhhhh.hhhhhhhhhhhh...eeeeeee...eeeeeeee......ee....eeeeeee..eeeeeee...eeee...eeee.hhhh...eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..hhhhhhhhhhhhh...hhhhhhhhhhhhhh...hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1z5h A   1 MEVEKYDLTLDFDIQKRTFNGTETITADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQTVRAPGDSQPQKIEISFAGKVSDSLSGIYYAGRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNGEEEGRWPVPVNIKKKDGVERILLEDEASIEADGLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQTAVK 780
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780

Chain B from PDB  Type:PROTEIN  Length:780
 aligned with TRF3_THEAC | O93655 from UniProtKB/Swiss-Prot  Length:780

    Alignment length:780
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780
           TRF3_THEAC     1 MEVEKYDLTLDFDIQKRTFNGTETITADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQTVRAPGDSQPQKIEISFAGKVSDSLSGIYYAGRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNGEEEGRWPVPVNIKKKDGVERILLEDEASIEADGLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQTAVK 780
               SCOP domains d1z5hb1 B:1-170 Tricorn protease interacting factor F3 N-terminal domain                                                                                                  d1z5hb2 B:171-414 Tricorn protease interacting factor F3 catalytic domain                                                                                                                                                                           d1z5hb3 B:415-489 Tricorn protease interacting factor F3 insert domain     d1z5hb4 B:490-780 Tricorn protease interacting factor F3 C-terminal domain                                                                                                                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) Peptidase_M1-1z5hB01 B:1-354                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------------------------------------------------------------DUF3358-1z5hB03 B:473-744                                                                                                                                                                                                                                                       ------------------------------------ Pfam domains (1)
           Pfam domains (2) Peptidase_M1-1z5hB02 B:1-354                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------------------------------------------------------------DUF3358-1z5hB04 B:473-744                                                                                                                                                                                                                                                       ------------------------------------ Pfam domains (2)
         Sec.struct. author ..eeeeeeeeeee....eeeeeeeeee....eeee....eeeeeee..ee...ee...eeee......eeeeeeeeee......eeeee.....eeeee....hhhhh...........eeeeeeee....eeee...eeeeee...eeeee......hhhhh.eeee..eeeeeee..eeeeeee......hhhhhhhhhhhhhhhhhhh......eeeeeee......ee....eeeeehhhhh.....hhhhhhhhhhhhhhhhhh......eee.hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeehhhhhhhhhhhhhh.hhhhhhhhhhhh...eeee......eeeeeeeeee..eeee....eeeeeee...eeeeee...eeee...eeee.hhhh...eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhhhhh...hhhhhhhhhhhhhh......hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh...hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ZINC_PROTE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1z5h B   1 MEVEKYDLTLDFDIQKRTFNGTETITADAGDIVLDAVGLQINWMKVNGRDTAFTYDGQTVRAPGDSQPQKIEISFAGKVSDSLSGIYYAGRENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRIEVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNGEEEGRWPVPVNIKKKDGVERILLEDEASIEADGLIKINADSAGFYRVLYDDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGSKNISMGLAKGIEMLAVNRKLVERIRQTAVK 780
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "CATH Domain" information available for 1Z5H)

Asymmetric Unit(hide GO term definitions)

Chain A,B (TRF3_THEAC | O93655)

molecular function
	GO:0004177	aminopeptidase activity	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008237	metallopeptidase activity	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
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	Cis Peptide Bonds
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	TRF3_THEAC \| O93655
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UniProtKB/Swiss-Prot
	TRF3_THEAC \| O93655	:	1z1w 3q7j

(no "Related Entries Specified in the PDB File" available for 1Z5H)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 19)

Sites (19, 19)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (4, 8)

CATH Domains (0, 0)

Pfam Domains (2, 4)

Gene Ontology (8, 8)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File