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(-) Description

Title :  CRYSTAL STRUCTURE OF UROKINASE PLASMINOGEN ACTIVATOR RECEPTOR
 
Authors :  P. Llinas, M. H. Le Du, H. Gardsvoll, K. Dano, M. Ploug, B. Gilquin, E. A. A. Menez
Date :  18 Feb 05  (Deposition) - 10 May 05  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P  (1x)
Biol. Unit 2:  A,B,C,D,E,F,G,H  (1x)
Biol. Unit 3:  I,J,K,L,M,N,O,P  (1x)
Keywords :  Upar, Three-Finger Fold, Protein-Peptide Complex, Hydrolase Receptor (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. Llinas, M. H. Le Du, H. Gardsvoll, K. Dano, M. Ploug, B. Gilquin, E. A. Stura, A. Menez
Crystal Structure Of The Human Urokinase Plasminogen Activator Receptor Bound To An Antagonist Peptide
Embo J. V. 24 1655 2005
PubMed-ID: 15861141  |  Reference-DOI: 10.1038/SJ.EMBOJ.7600635

(-) Compounds

Molecule 1 - UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR
    ChainsA, C, E, G, I, K, M, O
    EngineeredYES
    Expression SystemDROSOPHILA MELANOGASTER
    Expression System CommonFRUIT FLY
    Expression System PlasmidPMTC-SUPAR
    Expression System Taxid7227
    Expression System Vector TypePLASMID
    GenePLAUR, MO3, UPAR
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymUPAR, U- PAR, MONOCYTE ACTIVATION ANTIGEN MO3, CD87 ANTIGEN
 
Molecule 2 - ANTAGONIST PEPTIDE
    ChainsB, D, F, H, J, L, N, P
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit ABCDEFGHIJKLMNOP
Biological Unit 1 (1x)ABCDEFGHIJKLMNOP
Biological Unit 2 (1x)ABCDEFGH        
Biological Unit 3 (1x)        IJKLMNOP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (9, 108)

Asymmetric Unit (9, 108)
No.NameCountTypeFull Name
1ALC8Mod. Amino Acid2-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
2BMA4Ligand/IonBETA-D-MANNOSE
3DLY8Mod. Amino AcidD-LYSINE
4DSN8Mod. Amino AcidD-SERINE
5FUC12Ligand/IonALPHA-L-FUCOSE
6MAN8Ligand/IonALPHA-D-MANNOSE
7NAG31Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG8Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9SO421Ligand/IonSULFATE ION
Biological Unit 1 (9, 108)
No.NameCountTypeFull Name
1ALC8Mod. Amino Acid2-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
2BMA4Ligand/IonBETA-D-MANNOSE
3DLY8Mod. Amino AcidD-LYSINE
4DSN8Mod. Amino AcidD-SERINE
5FUC12Ligand/IonALPHA-L-FUCOSE
6MAN8Ligand/IonALPHA-D-MANNOSE
7NAG31Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG8Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9SO421Ligand/IonSULFATE ION
Biological Unit 2 (7, 50)
No.NameCountTypeFull Name
1ALC4Mod. Amino Acid2-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
2BMA-1Ligand/IonBETA-D-MANNOSE
3DLY4Mod. Amino AcidD-LYSINE
4DSN4Mod. Amino AcidD-SERINE
5FUC7Ligand/IonALPHA-L-FUCOSE
6MAN-1Ligand/IonALPHA-D-MANNOSE
7NAG16Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG2Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9SO413Ligand/IonSULFATE ION
Biological Unit 3 (9, 58)
No.NameCountTypeFull Name
1ALC4Mod. Amino Acid2-AMINO-3-CYCLOHEXYL-PROPIONIC ACID
2BMA4Ligand/IonBETA-D-MANNOSE
3DLY4Mod. Amino AcidD-LYSINE
4DSN4Mod. Amino AcidD-SERINE
5FUC5Ligand/IonALPHA-L-FUCOSE
6MAN8Ligand/IonALPHA-D-MANNOSE
7NAG15Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NDG6Ligand/Ion2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
9SO48Ligand/IonSULFATE ION

(-) Sites  (84, 84)

Asymmetric Unit (84, 84)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:52 , NAG A:315 , FUC A:316 , HOH A:831BINDING SITE FOR RESIDUE NAG A 314
02AC2SOFTWARENAG A:314 , FUC A:316BINDING SITE FOR RESIDUE NAG A 315
03AC3SOFTWARESER A:81 , GLY A:82 , SER A:117 , GLU A:119 , NAG A:314 , NAG A:315BINDING SITE FOR RESIDUE FUC A 316
04AC4SOFTWAREASN A:162 , ASP A:163 , PHE A:211 , HOH A:850BINDING SITE FOR RESIDUE NDG A 317
05AC5SOFTWAREASN A:172BINDING SITE FOR RESIDUE NAG A 321
06AC6SOFTWAREASN C:52 , FUC C:315BINDING SITE FOR RESIDUE NAG C 314
07AC7SOFTWARESER C:117 , GLU C:119 , NAG C:314BINDING SITE FOR RESIDUE FUC C 315
08AC8SOFTWAREASN C:162BINDING SITE FOR RESIDUE NAG C 316
09AC9SOFTWAREASN C:172 , HOH C:876BINDING SITE FOR RESIDUE NAG C 321
10BC1SOFTWAREASN C:233 , HIS C:260 , NAG C:332 , FUC C:336 , HOH C:851BINDING SITE FOR RESIDUE NAG C 331
11BC2SOFTWARENAG C:331BINDING SITE FOR RESIDUE NAG C 332
12BC3SOFTWARETHR C:226 , NAG C:331BINDING SITE FOR RESIDUE FUC C 336
13BC4SOFTWAREASN E:52 , NAG E:315 , FUC E:316BINDING SITE FOR RESIDUE NAG E 314
14BC5SOFTWARENAG E:314 , FUC E:316BINDING SITE FOR RESIDUE NAG E 315
15BC6SOFTWARESER E:117 , GLU E:119 , NAG E:314 , NAG E:315 , HOH E:831BINDING SITE FOR RESIDUE FUC E 316
16BC7SOFTWAREILE E:130 , GLN E:131 , ASN E:162 , PHE E:211BINDING SITE FOR RESIDUE NAG E 317
17BC8SOFTWAREASN E:172 , FUC E:326BINDING SITE FOR RESIDUE NAG E 321
18BC9SOFTWARETHR E:173 , NAG E:321BINDING SITE FOR RESIDUE FUC E 326
19CC1SOFTWAREASN G:52 , FUC G:315 , HOH G:889BINDING SITE FOR RESIDUE NAG G 314
20CC2SOFTWARETHR G:67 , SER G:117 , GLU G:119 , NAG G:314BINDING SITE FOR RESIDUE FUC G 315
21CC3SOFTWAREASN G:162 , NAG G:317BINDING SITE FOR RESIDUE NAG G 316
22CC4SOFTWARENAG G:316BINDING SITE FOR RESIDUE NAG G 317
23CC5SOFTWAREASN G:172BINDING SITE FOR RESIDUE NAG G 321
24CC6SOFTWARETHR G:228 , ASN G:233 , HIS G:260 , FUC G:336 , HOH G:841 , HOH G:842BINDING SITE FOR RESIDUE NDG G 331
25CC7SOFTWARENDG G:331BINDING SITE FOR RESIDUE FUC G 336
26CC8SOFTWAREASN I:52 , VAL I:69 , FUC I:315 , HOH I:858BINDING SITE FOR RESIDUE NAG I 314
27CC9SOFTWAREARG I:83 , SER I:117 , GLU I:119 , NAG I:314BINDING SITE FOR RESIDUE FUC I 315
28DC1SOFTWAREASN I:162 , PHE I:211 , NAG I:317BINDING SITE FOR RESIDUE NDG I 316
29DC2SOFTWARENDG I:316 , BMA I:318BINDING SITE FOR RESIDUE NAG I 317
30DC3SOFTWARENAG I:317 , MAN I:319 , MAN I:320BINDING SITE FOR RESIDUE BMA I 318
31DC4SOFTWAREBMA I:318 , HOH I:824BINDING SITE FOR RESIDUE MAN I 319
32DC5SOFTWAREBMA I:318BINDING SITE FOR RESIDUE MAN I 320
33DC6SOFTWAREASN I:172BINDING SITE FOR RESIDUE NAG I 321
34DC7SOFTWAREASN I:233 , HIS I:260 , FUC I:336 , HOH I:855BINDING SITE FOR RESIDUE NAG I 331
35DC8SOFTWARETHR I:226 , GLY I:227 , ASN I:233 , NAG I:331BINDING SITE FOR RESIDUE FUC I 336
36DC9SOFTWAREASN K:52 , NAG K:315 , FUC K:316BINDING SITE FOR RESIDUE NAG K 314
37EC1SOFTWARENAG K:314BINDING SITE FOR RESIDUE NAG K 315
38EC2SOFTWARESER K:117 , PRO K:118 , GLU K:119 , NAG K:314BINDING SITE FOR RESIDUE FUC K 316
39EC3SOFTWAREASN K:162 , PHE K:211 , NAG K:318BINDING SITE FOR RESIDUE NDG K 317
40EC4SOFTWARENDG K:317 , BMA K:319BINDING SITE FOR RESIDUE NAG K 318
41EC5SOFTWARENAG K:318 , MAN K:320 , MAN K:321BINDING SITE FOR RESIDUE BMA K 319
42EC6SOFTWAREBMA K:319BINDING SITE FOR RESIDUE MAN K 320
43EC7SOFTWAREBMA K:319 , HOH K:836BINDING SITE FOR RESIDUE MAN K 321
44EC8SOFTWAREASN K:172BINDING SITE FOR RESIDUE NAG K 322
45EC9SOFTWAREASN K:233BINDING SITE FOR RESIDUE NDG K 331
46FC1SOFTWAREASN M:52 , FUC M:315 , HOH M:834BINDING SITE FOR RESIDUE NAG M 314
47FC2SOFTWARESER M:117 , GLU M:119 , NAG M:314BINDING SITE FOR RESIDUE FUC M 315
48FC3SOFTWAREASN M:162 , PHE M:211 , NAG M:317BINDING SITE FOR RESIDUE NDG M 316
49FC4SOFTWARENDG M:316 , BMA M:318 , HOH M:872BINDING SITE FOR RESIDUE NAG M 317
50FC5SOFTWARENAG M:317 , MAN M:319 , MAN M:320BINDING SITE FOR RESIDUE BMA M 318
51FC6SOFTWAREBMA M:318BINDING SITE FOR RESIDUE MAN M 319
52FC7SOFTWAREBMA M:318 , HOH M:825BINDING SITE FOR RESIDUE MAN M 320
53FC8SOFTWAREASN M:172 , NAG M:322 , HOH M:845 , HOH M:873BINDING SITE FOR RESIDUE NAG M 321
54FC9SOFTWARENAG M:321BINDING SITE FOR RESIDUE NAG M 322
55GC1SOFTWARETHR M:228 , ASN M:233 , HIS M:260 , HOH M:832BINDING SITE FOR RESIDUE NAG M 331
56GC2SOFTWAREASN O:52 , FUC O:315 , HOH O:822BINDING SITE FOR RESIDUE NAG O 314
57GC3SOFTWARESER O:117 , GLU O:119 , NAG O:314BINDING SITE FOR RESIDUE FUC O 315
58GC4SOFTWAREASN O:162 , PHE O:211 , NAG O:317BINDING SITE FOR RESIDUE NDG O 316
59GC5SOFTWARENDG O:316 , BMA O:318BINDING SITE FOR RESIDUE NAG O 317
60GC6SOFTWARENAG O:317 , MAN O:319 , MAN O:320BINDING SITE FOR RESIDUE BMA O 318
61GC7SOFTWAREBMA O:318 , HOH O:814 , HOH O:871BINDING SITE FOR RESIDUE MAN O 319
62GC8SOFTWAREBMA O:318 , HOH O:835BINDING SITE FOR RESIDUE MAN O 320
63GC9SOFTWAREASN O:172BINDING SITE FOR RESIDUE NDG O 321
64HC1SOFTWARELYS A:7 , ARG C:13BINDING SITE FOR RESIDUE SO4 A 801
65HC2SOFTWARELYS E:7 , ARG G:13 , HOH G:835BINDING SITE FOR RESIDUE SO4 G 802
66HC3SOFTWARELYS K:7 , ARG M:13BINDING SITE FOR RESIDUE SO4 K 803
67HC4SOFTWAREARG I:13 , LYS O:7BINDING SITE FOR RESIDUE SO4 I 804
68HC5SOFTWAREARG A:53 , PRO A:151 , HIS A:249 , ALA A:250 , HIS A:251 , HOH A:829BINDING SITE FOR RESIDUE SO4 A 805
69HC6SOFTWAREARG C:53 , HIS C:249 , ALA C:250 , HIS C:251BINDING SITE FOR RESIDUE SO4 C 806
70HC7SOFTWAREGLU E:49 , LYS E:50 , PRO E:151 , HIS E:249 , ALA E:250 , HIS E:251 , HOH E:826 , HOH E:908BINDING SITE FOR RESIDUE SO4 E 807
71HC8SOFTWARELYS G:50 , ARG G:53 , HIS G:249 , ALA G:250 , HIS G:251BINDING SITE FOR RESIDUE SO4 G 808
72HC9SOFTWAREARG I:53 , PRO I:151 , HIS I:249 , ALA I:250 , HIS I:251BINDING SITE FOR RESIDUE SO4 I 809
73IC1SOFTWAREGLU K:49 , ARG K:53 , PRO K:151 , GLN K:248 , HIS K:249 , ALA K:250 , HIS K:251 , HOH K:823BINDING SITE FOR RESIDUE SO4 K 810
74IC2SOFTWARELYS M:50 , ARG M:53 , HIS M:249 , ALA M:250 , HIS M:251BINDING SITE FOR RESIDUE SO4 M 811
75IC3SOFTWAREGLU O:49 , ARG O:53 , PRO O:151 , GLN O:248 , HIS O:249 , ALA O:250 , HIS O:251BINDING SITE FOR RESIDUE SO4 O 812
76IC4SOFTWAREARG A:58 , GLN A:111 , ARG I:58 , GLN I:111BINDING SITE FOR RESIDUE SO4 A 813
77IC5SOFTWAREARG C:58 , GLN C:111 , ARG O:58 , GLN O:111BINDING SITE FOR RESIDUE SO4 C 814
78IC6SOFTWAREARG E:58 , GLN E:111 , ARG M:58 , GLN M:111BINDING SITE FOR RESIDUE SO4 E 815
79IC7SOFTWAREARG G:58 , GLN G:111 , HOH G:828 , ARG K:58 , GLN K:111BINDING SITE FOR RESIDUE SO4 G 816
80IC8SOFTWARETHR G:164 , HIS G:166 , LYS G:198 , PHE G:256 , SER G:257BINDING SITE FOR RESIDUE SO4 G 817
81IC9SOFTWARETHR C:164 , HIS C:166 , ALA C:255 , PHE C:256 , SER C:257BINDING SITE FOR RESIDUE SO4 C 818
82JC1SOFTWARETHR M:164 , HIS M:166 , PHE M:256 , SER M:257BINDING SITE FOR RESIDUE SO4 M 819
83JC2SOFTWARETRP E:129 , THR E:164 , HIS E:166 , PHE E:256 , SER E:257BINDING SITE FOR RESIDUE SO4 E 820
84JC3SOFTWARETRP I:129 , THR I:164 , HIS I:166 , LYS I:198 , PHE I:256 , SER I:257BINDING SITE FOR RESIDUE SO4 I 821

(-) SS Bonds  (112, 112)

Asymmetric Unit
No.Residues
1A:3 -A:24
2A:6 -A:12
3A:17 -A:45
4A:71 -A:76
5A:95 -A:122
6A:98 -A:105
7A:115 -A:147
8A:153 -A:170
9A:171 -A:176
10A:194 -A:222
11A:197 -A:205
12A:215 -A:241
13A:247 -A:265
14A:266 -A:271
15C:3 -C:24
16C:6 -C:12
17C:17 -C:45
18C:71 -C:76
19C:95 -C:122
20C:98 -C:105
21C:115 -C:147
22C:153 -C:170
23C:171 -C:176
24C:194 -C:222
25C:197 -C:205
26C:215 -C:241
27C:247 -C:265
28C:266 -C:271
29E:3 -E:24
30E:6 -E:12
31E:17 -E:45
32E:71 -E:76
33E:95 -E:122
34E:98 -E:105
35E:115 -E:147
36E:153 -E:170
37E:171 -E:176
38E:194 -E:222
39E:197 -E:205
40E:215 -E:241
41E:247 -E:265
42E:266 -E:271
43G:3 -G:24
44G:6 -G:12
45G:17 -G:45
46G:71 -G:76
47G:95 -G:122
48G:98 -G:105
49G:115 -G:147
50G:153 -G:170
51G:171 -G:176
52G:194 -G:222
53G:197 -G:205
54G:215 -G:241
55G:247 -G:265
56G:266 -G:271
57I:3 -I:24
58I:6 -I:12
59I:17 -I:45
60I:71 -I:76
61I:95 -I:122
62I:98 -I:105
63I:115 -I:147
64I:153 -I:170
65I:171 -I:176
66I:194 -I:222
67I:197 -I:205
68I:215 -I:241
69I:247 -I:265
70I:266 -I:271
71K:3 -K:24
72K:6 -K:12
73K:17 -K:45
74K:71 -K:76
75K:95 -K:122
76K:98 -K:105
77K:115 -K:147
78K:153 -K:170
79K:171 -K:176
80K:194 -K:222
81K:197 -K:205
82K:215 -K:241
83K:247 -K:265
84K:266 -K:271
85M:3 -M:24
86M:6 -M:12
87M:17 -M:45
88M:71 -M:76
89M:95 -M:122
90M:98 -M:105
91M:115 -M:147
92M:153 -M:170
93M:171 -M:176
94M:194 -M:222
95M:197 -M:205
96M:215 -M:241
97M:247 -M:265
98M:266 -M:271
99O:3 -O:24
100O:6 -O:12
101O:17 -O:45
102O:71 -O:76
103O:95 -O:122
104O:98 -O:105
105O:115 -O:147
106O:153 -O:170
107O:171 -O:176
108O:194 -O:222
109O:197 -O:205
110O:215 -O:241
111O:247 -O:265
112O:266 -O:271

(-) Cis Peptide Bonds  (15, 15)

Asymmetric Unit
No.Residues
1Cys A:153 -Pro A:154
2Cys C:153 -Pro C:154
3Glu C:230 -Pro C:231
4Cys E:153 -Pro E:154
5Glu E:230 -Pro E:231
6Cys G:153 -Pro G:154
7Glu G:230 -Pro G:231
8Cys I:153 -Pro I:154
9Glu I:230 -Pro I:231
10Cys K:153 -Pro K:154
11Glu K:230 -Pro K:231
12Cys M:153 -Pro M:154
13Glu M:230 -Pro M:231
14Cys O:153 -Pro O:154
15Glu O:230 -Pro O:231

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (6, 41)

Asymmetric Unit (6, 41)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_016322E55GUPAR_HUMANPolymorphism4251813A/C/E/G/I/K/M/OE33G
2UniProtVAR_016323T86AUPAR_HUMANPolymorphism399145A/C/E/G/I/K/M/OT64A
3UniProtVAR_016324R105QUPAR_HUMANPolymorphism4251878IR83Q
4UniProtVAR_016325K220RUPAR_HUMANPolymorphism2302524A/C/E/G/I/K/M/OK198R
5UniProtVAR_016326N281KUPAR_HUMANPolymorphism4251921A/C/E/G/I/K/M/ON259K
6UniProtVAR_052698D297AUPAR_HUMANPolymorphism16976608A/C/E/G/I/K/M/OD275A

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (6, 41)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_016322E55GUPAR_HUMANPolymorphism4251813A/C/E/G/I/K/M/OE33G
2UniProtVAR_016323T86AUPAR_HUMANPolymorphism399145A/C/E/G/I/K/M/OT64A
3UniProtVAR_016324R105QUPAR_HUMANPolymorphism4251878IR83Q
4UniProtVAR_016325K220RUPAR_HUMANPolymorphism2302524A/C/E/G/I/K/M/OK198R
5UniProtVAR_016326N281KUPAR_HUMANPolymorphism4251921A/C/E/G/I/K/M/ON259K
6UniProtVAR_052698D297AUPAR_HUMANPolymorphism16976608A/C/E/G/I/K/M/OD275A

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (5, 20)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_016322E55GUPAR_HUMANPolymorphism4251813A/C/E/GE33G
2UniProtVAR_016323T86AUPAR_HUMANPolymorphism399145A/C/E/GT64A
4UniProtVAR_016325K220RUPAR_HUMANPolymorphism2302524A/C/E/GK198R
5UniProtVAR_016326N281KUPAR_HUMANPolymorphism4251921A/C/E/GN259K
6UniProtVAR_052698D297AUPAR_HUMANPolymorphism16976608A/C/E/GD275A

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (6, 21)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_016322E55GUPAR_HUMANPolymorphism4251813I/K/M/OE33G
2UniProtVAR_016323T86AUPAR_HUMANPolymorphism399145I/K/M/OT64A
3UniProtVAR_016324R105QUPAR_HUMANPolymorphism4251878IR83Q
4UniProtVAR_016325K220RUPAR_HUMANPolymorphism2302524I/K/M/OK198R
5UniProtVAR_016326N281KUPAR_HUMANPolymorphism4251921I/K/M/ON259K
6UniProtVAR_052698D297AUPAR_HUMANPolymorphism16976608I/K/M/OD275A

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 24)

Asymmetric Unit (1, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LY6_UPARPS00983 Ly-6 / u-PAR domain signature.UPAR_HUMAN24-67
 
 
 
 
 
 
 
116-169
 
 
 
 
 
 
 
215-269
 
 
 
 
 
 
 
  24A:2-45
C:2-45
E:2-45
G:2-45
I:2-45
K:2-45
M:2-45
O:2-45
A:94-147
C:94-147
E:94-147
G:94-147
I:94-147
K:94-147
M:94-147
O:94-147
A:193-247
C:193-247
E:193-247
G:193-247
I:193-247
K:193-247
M:193-247
O:193-247
Biological Unit 1 (1, 24)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LY6_UPARPS00983 Ly-6 / u-PAR domain signature.UPAR_HUMAN24-67
 
 
 
 
 
 
 
116-169
 
 
 
 
 
 
 
215-269
 
 
 
 
 
 
 
  24A:2-45
C:2-45
E:2-45
G:2-45
I:2-45
K:2-45
M:2-45
O:2-45
A:94-147
C:94-147
E:94-147
G:94-147
I:94-147
K:94-147
M:94-147
O:94-147
A:193-247
C:193-247
E:193-247
G:193-247
I:193-247
K:193-247
M:193-247
O:193-247
Biological Unit 2 (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LY6_UPARPS00983 Ly-6 / u-PAR domain signature.UPAR_HUMAN24-67
 
 
 
 
 
 
 
116-169
 
 
 
 
 
 
 
215-269
 
 
 
 
 
 
 
  12A:2-45
C:2-45
E:2-45
G:2-45
-
-
-
-
A:94-147
C:94-147
E:94-147
G:94-147
-
-
-
-
A:193-247
C:193-247
E:193-247
G:193-247
-
-
-
-
Biological Unit 3 (1, 12)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1LY6_UPARPS00983 Ly-6 / u-PAR domain signature.UPAR_HUMAN24-67
 
 
 
 
 
 
 
116-169
 
 
 
 
 
 
 
215-269
 
 
 
 
 
 
 
  12-
-
-
-
I:2-45
K:2-45
M:2-45
O:2-45
-
-
-
-
I:94-147
K:94-147
M:94-147
O:94-147
-
-
-
-
I:193-247
K:193-247
M:193-247
O:193-247

(-) Exons   (6, 48)

Asymmetric Unit (6, 48)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000003400931ENSE00001048170chr19:44174502-44174218285UPAR_HUMAN1-19190--
1.2ENST000003400932ENSE00000847438chr19:44171843-44171733111UPAR_HUMAN19-56388A:1-34
C:1-34
E:1-34
G:1-34
I:1-34
K:1-34
M:1-34
O:1-34
34
34
34
34
34
34
34
34
1.3ENST000003400933ENSE00000494759chr19:44169611-44169468144UPAR_HUMAN56-104498A:34-82
C:34-80
E:34-79
G:34-79
I:34-82
K:34-78
M:34-81
O:34-81
49
47
46
46
49
45
48
48
1.4ENST000003400934ENSE00000710867chr19:44160792-44160631162UPAR_HUMAN104-158558A:82-131 (gaps)
C:91-131
E:89-131
G:92-132
I:82-131 (gaps)
K:90-130
M:88-131
O:92-131
50
41
43
41
50
41
44
40
1.5ENST000003400935ENSE00000710856chr19:44159725-44159591135UPAR_HUMAN158-203468A:137-181
C:138-181
E:139-181
G:139-181
I:137-181
K:139-181
M:140-181
O:140-181
45
44
43
43
45
43
42
42
1.6ENST000003400936ENSE00000847435chr19:44156523-44156377147UPAR_HUMAN203-252508A:181-230
C:181-230
E:181-230
G:181-230
I:181-230
K:181-230
M:181-230
O:181-230
50
50
50
50
50
50
50
50
1.7ENST000003400937ENSE00000847434chr19:44153295-44152732564UPAR_HUMAN252-335848A:230-279
C:230-275
E:230-278
G:230-276
I:230-275
K:230-276
M:230-277
O:230-276
50
46
49
47
46
47
48
47

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:268
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:279
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292         
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQ 301
               SCOP domains d1ywha2 A:1-82 Urokinase plasminogen activator surface receptor uPAR                    d1ywha1 A:89-188 Urokinase plasminogen acti     vator surface receptor uPAR                         d1ywha3 A:189-279 Urokinase plasminogen activator surface receptor uPAR                     SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeeeeee..eeeeeeeeeee......eeeeee....eeeeeeeee...........------.....eee.......hhhhhh..eee......eeeeeeeee..-----.....eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeee......hhhhheeeeee....eeeeeee........eeeeeee.hhhhhhhhhhh.......eeeee............. Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A---- SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: A:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: A:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: A:193-247 UniProt: 215-269              -------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: A:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: A:82-131 (gaps) UniProt: 104-158        --------------------------------------------Exon 1.6  PDB: A:181-230 UniProt: 203-252         ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: A:34-82 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: A:137-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: A:230-279 UniProt: 252-335          Transcript 1 (2)
                 1ywh A   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSG------RSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQ-----RPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQ 279
                                    10        20        30        40        50        60        70        80 |      90       100       110       120       130|     |140       150       160       170       180       190       200       210       220       230       240       250       260       270         
                                                                                                            82     89                                       131   137                                                                                                                                              

Chain B from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh B 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain C from PDB  Type:PROTEIN  Length:259
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:275
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292     
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD 297
               SCOP domains d1ywhc2 C:1-80 Urokinase plasminogen activator surface receptor uPAR                      d1ywhc1 C:91-188 Urokinase plasminogen ac      tivator surface receptor uPAR                      d1ywhc3 C:189-275 Urokinase plasminogen activator surface receptor uPAR                 SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeee.ee..ee..eeeeeee......eeeeee....eeeeeeeee.........----------...eee...............eee......eeeeeeeee..------....eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeee...........eeeeee....eeeeeeee......eeeeeeee.hhhhhhhhhhh....eeeeeeee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: C:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: C:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: C:193-247 UniProt: 215-269              ---------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: C:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: C:91-131 UniProt: 104-158 [INCOMPLETE]  --------------------------------------------Exon 1.6  PDB: C:181-230 UniProt: 203-252         --------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: C:34-80 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: C:138-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: C:230-275 UniProt: 252-335      Transcript 1 (2)
                 1ywh C   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGN----------RYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQ------PKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD 275
                                    10        20        30        40        50        60        70        80         -|      100       110       120       130|      140       150       160       170       180       190       200       210       220       230       240       250       260       270     
                                                                                                          80         91                                     131    138                                                                                                                                         

Chain D from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh D 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain E from PDB  Type:PROTEIN  Length:262
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:278
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292        
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV 300
               SCOP domains d1ywhe2 E:1-79 Urokinase plasminogen activator surface receptor uPAR                    d1ywhe1 E:89-188 Urokinase plasminogen acti       vator surface receptor uPAR                       d1ywhe3 E:189-278 Urokinase plasminogen activator surface receptor uPAR                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeeeeee..eeeeeeeeeee......eeeeee....eeeeeeeee........---------.....eee...............eee......eeeeeeeee..-------...eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeee...........eeeeee....eeeeeeeee....eeeeeeeee.hhhhhhhhhhh.......eeeee......hhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A--- SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: E:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: E:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: E:193-247 UniProt: 215-269              ------------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: E:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: E:89-131 UniProt: 104-158 [INCOMPLETE]  --------------------------------------------Exon 1.6  PDB: E:181-230 UniProt: 203-252         ------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: E:34-79 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: E:139-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: E:230-278 UniProt: 252-335         Transcript 1 (2)
                 1ywh E   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQG---------RSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQ-------KDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV 278
                                    10        20        30        40        50        60        70        |-        90       100       110       120       130|      140       150       160       170       180       190       200       210       220       230       240       250       260       270        
                                                                                                         79        89                                       131     139                                                                                                                                           

Chain F from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh F 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain G from PDB  Type:PROTEIN  Length:258
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:276
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292      
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDL 298
               SCOP domains d1ywhg2 G:1-79 Urokinase plasminogen activator surface receptor uPAR                       d1ywhg1 G:92-188 Urokinase plasminogen ac      tivator surface receptor uPAR                     d1ywhg3 G:189-276 Urokinase plasminogen activator surface receptor uPAR                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeeeeee..eeeeeeeeeee......eeeeee....eeeeeeeee........------------..eee...............eee......eeeeeeeee...------...eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeee...........eeeeee....eeeeeeeee....eeeeeeeee.hhhhhhhhhhh....eeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A- SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: G:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: G:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: G:193-247 UniProt: 215-269              ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: G:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: G:92-132 UniProt: 104-158 [INCOMPLETE]  --------------------------------------------Exon 1.6  PDB: G:181-230 UniProt: 203-252         ---------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: G:34-79 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: G:139-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: G:230-276 UniProt: 252-335       Transcript 1 (2)
                 1ywh G   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQG------------YLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQE------KDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDL 276
                                    10        20        30        40        50        60        70        |-         - |     100       110       120       130 |     140       150       160       170       180       190       200       210       220       230       240       250       260       270      
                                                                                                         79           92                                     132    139                                                                                                                                         

Chain H from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh H 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain I from PDB  Type:PROTEIN  Length:264
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:275
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292     
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD 297
               SCOP domains d1ywhi2 I:1-82 Urokinase plasminogen activator surface receptor uPAR              ---      d1ywhi1 I:92-188 Urokinase plasminogen a     ctivator surface receptor uPAR                      d1ywhi3 I:189-275 Urokinase plasminogen activator surface receptor uPAR                 SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeeee......eeeeeeeee......eeeeee....eeeeeeeee..............------..eee.......hhhhhh..eee......eeeeeeeee..-----.....eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeee...........eeeeee....eeeeeeee......eeeeeeee.hhhhhhhhhhh....eeeeeeee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A------------------Q------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: I:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: I:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: I:193-247 UniProt: 215-269              ---------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: I:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: I:82-131 (gaps) UniProt: 104-158        --------------------------------------------Exon 1.6  PDB: I:181-230 UniProt: 203-252         --------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: I:34-82 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: I:137-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: I:230-275 UniProt: 252-335      Transcript 1 (2)
                 1ywh I   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAV------YLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQ-----RPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD 275
                                    10        20        30        40        50        60        70        80    |    - |     100       110       120       130|     |140       150       160       170       180       190       200       210       220       230       240       250       260       270     
                                                                                                               85     92                                    131   137                                                                                                                                          

Chain J from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh J 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain K from PDB  Type:PROTEIN  Length:257
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:276
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292      
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDL 298
               SCOP domains d1ywhk2 K:1-78 Urokinase plasminogen activator surface receptor uPAR                     d1ywhk1 K:90-188 Urokinase plasminogen ac        tivator surface receptor uPAR                     d1ywhk3 K:189-276 Urokinase plasminogen activator surface receptor uPAR                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeeeee....eeeeeeeeee......eeeeee....eeeeeeeee.......-----------....eee.......hhhhhh..eee......eeeeeeeee.--------...eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeeee..........eeeeee....eeeeeee........eeeeeee.hhhhhhhhhhhhhh...eeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A- SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: K:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: K:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: K:193-247 UniProt: 215-269              ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: K:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: K:90-130 UniProt: 104-158 [INCOMPLETE]  --------------------------------------------Exon 1.6  PDB: K:181-230 UniProt: 203-252         ---------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: K:34-78 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: K:139-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: K:230-276 UniProt: 252-335       Transcript 1 (2)
                 1ywh K   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQ-----------SRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWI--------KDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDL 276
                                    10        20        30        40        50        60        70       | -        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
                                                                                                        78          90                                     130      139                                                                                                                                         

Chain L from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh L 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain M from PDB  Type:PROTEIN  Length:263
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:277
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLD 299
               SCOP domains d1ywhm2 M:1-81 Urokinase plasminogen activator surface receptor uPAR                   -d1ywhm1 M:89-188 Urokinase plasminogen acti        vator surface receptor uPAR                      d1ywhm3 M:189-277 Urokinase plasminogen activator surface receptor uPAR                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....eeeee......eeeeeeeeee....eeeeeeeeee......eeeeee....eeeeeeeee..........------......eee...............eee......eeeeeeeee..--------..eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.....eeeeeee...........eeee......eeeeeeeee....eeeeeeeee.hhhhhhhhhhh.......eeeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A-- SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: M:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: M:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: M:193-247 UniProt: 215-269              ------------------------------ PROSITE
           Transcript 1 (1) Exon 1.2  PDB: M:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: M:88-131 UniProt: 104-158 [INCOMPLETE]  --------------------------------------------Exon 1.6  PDB: M:181-230 UniProt: 203-252         ----------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: M:34-81 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: M:140-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: M:230-277 UniProt: 252-335        Transcript 1 (2)
                 1ywh M   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNS------SRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQ--------DDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLD 277
                                    10        20        30        40        50        60        70        80|      |90       100       110       120       130|      140       150       160       170       180       190       200       210       220       230       240       250       260       270       
                                                                                                           81     88                                        131      140                                                                                                                                         

Chain N from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ....hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh N 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

Chain O from PDB  Type:PROTEIN  Length:258
 aligned with UPAR_HUMAN | Q03405 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:276
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292      
           UPAR_HUMAN    23 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDL 298
               SCOP domains d1ywho2 O:1-81 Urokinase plasminogen activator surface receptor uPAR                       d1ywho1 O:92-188 Urokinase plasminogen a        ctivator surface receptor uPAR                   d1ywho3 O:189-276 Urokinase plasminogen activator surface receptor uPAR                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO01 O:194-272                                                     ---- Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO02 O:194-272                                                     ---- Pfam domains (2)
           Pfam domains (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO03 O:194-272                                                     ---- Pfam domains (3)
           Pfam domains (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO04 O:194-272                                                     ---- Pfam domains (4)
           Pfam domains (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO05 O:194-272                                                     ---- Pfam domains (5)
           Pfam domains (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO06 O:194-272                                                     ---- Pfam domains (6)
           Pfam domains (7) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO07 O:194-272                                                     ---- Pfam domains (7)
           Pfam domains (8) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO08 O:194-272                                                     ---- Pfam domains (8)
           Pfam domains (9) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO09 O:194-272                                                     ---- Pfam domains (9)
          Pfam domains (10) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO10 O:194-272                                                     ---- Pfam domains (10)
          Pfam domains (11) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO11 O:194-272                                                     ---- Pfam domains (11)
          Pfam domains (12) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO12 O:194-272                                                     ---- Pfam domains (12)
          Pfam domains (13) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO13 O:194-272                                                     ---- Pfam domains (13)
          Pfam domains (14) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO14 O:194-272                                                     ---- Pfam domains (14)
          Pfam domains (15) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO15 O:194-272                                                     ---- Pfam domains (15)
          Pfam domains (16) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO16 O:194-272                                                     ---- Pfam domains (16)
          Pfam domains (17) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO17 O:194-272                                                     ---- Pfam domains (17)
          Pfam domains (18) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO18 O:194-272                                                     ---- Pfam domains (18)
          Pfam domains (19) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO19 O:194-272                                                     ---- Pfam domains (19)
          Pfam domains (20) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO20 O:194-272                                                     ---- Pfam domains (20)
          Pfam domains (21) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO21 O:194-272                                                     ---- Pfam domains (21)
          Pfam domains (22) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO22 O:194-272                                                     ---- Pfam domains (22)
          Pfam domains (23) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO23 O:194-272                                                     ---- Pfam domains (23)
          Pfam domains (24) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UPAR_LY6-1ywhO24 O:194-272                                                     ---- Pfam domains (24)
         Sec.struct. author .eeeee.....eeeee......eeeeeeeeeee..eeeeeeeeeee......eeeeee....eeeeeeeee...hhhhh..----------..eee...............eee......eeeeeeeee..--------..eeeeeeee.....eeeeee...eeeeeeee...........hhhhh.eeeeeeeeeee...........eeeeee....eeeeeeeee....eeeeeeeee.hhhhhhhhhhh....eeeeeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------G------------------------------A-------------------------------------------------------------------------------------------------------------------------------------R------------------------------------------------------------K---------------A- SAPs(SNPs)
                    PROSITE -LY6_UPAR  PDB: O:2-45 UniProt: 24-67        ------------------------------------------------LY6_UPAR  PDB: O:94-147 UniProt: 116-169              ---------------------------------------------LY6_UPAR  PDB: O:193-247 UniProt: 215-269              ----------------------------- PROSITE
           Transcript 1 (1) Exon 1.2  PDB: O:1-34 [INCOMPLETE]-----------------------------------------------Exon 1.4  PDB: O:92-131 UniProt: 104-158 [INCOMPLETE]  --------------------------------------------Exon 1.6  PDB: O:181-230 UniProt: 203-252         ---------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.3  PDB: O:34-81 UniProt: 56-104           -----------------------------------------------------Exon 1.5  PDB: O:140-181 UniProt: 158-203     ------------------------------------------------Exon 1.7  PDB: O:230-276 UniProt: 252-335       Transcript 1 (2)
                 1ywh O   1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNS----------YLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQ--------DDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDL 276
                                    10        20        30        40        50        60        70        80|        - |     100       110       120       130|      140       150       160       170       180       190       200       210       220       230       240       250       260       270      
                                                                                                           81         92                                    131      140                                                                                                                                        

Chain P from PDB  Type:PROTEIN  Length:13
                                             
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author .....hhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                 1ywh P 501 KSDaFskYLWSSK 513
                               | ||510   
                             504-ALC     
                               506-DSN   
                                507-DLY  

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 24)

Asymmetric Unit
1ad1ywha1A:89-188
1bd1ywhc2C:1-80
1cd1ywhc3C:189-275
1dd1ywhe1E:89-188
1ed1ywhe2E:1-79
1fd1ywhe3E:189-278
1gd1ywhg1G:92-188
1hd1ywhg2G:1-79
1id1ywhg3G:189-276
1jd1ywhi1I:92-188
1kd1ywhi2I:1-82
1ld1ywhi3I:189-275
1md1ywhk1K:90-188
1nd1ywhk2K:1-78
1od1ywhk3K:189-276
1pd1ywhm1M:89-188
1qd1ywhm2M:1-81
1rd1ywhm3M:189-277
1sd1ywho1O:92-188
1td1ywho2O:1-81
1ud1ywho3O:189-276
1vd1ywha2A:1-82
1wd1ywha3A:189-279
1xd1ywhc1C:91-188

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1YWH)

(-) Pfam Domains  (1, 24)

Asymmetric Unit
1aUPAR_LY6-1ywhO01O:194-272
1bUPAR_LY6-1ywhO02O:194-272
1cUPAR_LY6-1ywhO03O:194-272
1dUPAR_LY6-1ywhO04O:194-272
1eUPAR_LY6-1ywhO05O:194-272
1fUPAR_LY6-1ywhO06O:194-272
1gUPAR_LY6-1ywhO07O:194-272
1hUPAR_LY6-1ywhO08O:194-272
1iUPAR_LY6-1ywhO09O:194-272
1jUPAR_LY6-1ywhO10O:194-272
1kUPAR_LY6-1ywhO11O:194-272
1lUPAR_LY6-1ywhO12O:194-272
1mUPAR_LY6-1ywhO13O:194-272
1nUPAR_LY6-1ywhO14O:194-272
1oUPAR_LY6-1ywhO15O:194-272
1pUPAR_LY6-1ywhO16O:194-272
1qUPAR_LY6-1ywhO17O:194-272
1rUPAR_LY6-1ywhO18O:194-272
1sUPAR_LY6-1ywhO19O:194-272
1tUPAR_LY6-1ywhO20O:194-272
1uUPAR_LY6-1ywhO21O:194-272
1vUPAR_LY6-1ywhO22O:194-272
1wUPAR_LY6-1ywhO23O:194-272
1xUPAR_LY6-1ywhO24O:194-272

(-) Gene Ontology  (35, 35)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G,I,K,M,O   (UPAR_HUMAN | Q03405)
molecular function
    GO:0019899    enzyme binding    Interacting selectively and non-covalently with any enzyme.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0019904    protein domain specific binding    Interacting selectively and non-covalently with a specific domain of a protein.
    GO:0004872    receptor activity    Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
    GO:0005102    receptor binding    Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
    GO:0030377    urokinase plasminogen activator receptor activity    Combining with the urokinase plasminogen activator to initiate a change in cell activity.
biological process
    GO:0016255    attachment of GPI anchor to protein    A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain.
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0006935    chemotaxis    The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
    GO:0042730    fibrinolysis    A process that solubilizes fibrin in the bloodstream of a multicellular organism, chiefly by the proteolytic action of plasmin.
    GO:0006928    movement of cell or subcellular component    The directed, self-propelled movement of a cell or subcellular component without the involvement of an external agent such as a transporter or a pore.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:2001268    negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway    Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.
    GO:2001243    negative regulation of intrinsic apoptotic signaling pathway    Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway.
    GO:0043388    positive regulation of DNA binding    Any process that increases the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).
    GO:0045742    positive regulation of epidermal growth factor receptor signaling pathway    Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.
    GO:0001934    positive regulation of protein phosphorylation    Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.
    GO:0090200    positive regulation of release of cytochrome c from mitochondria    Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.
    GO:0030162    regulation of proteolysis    Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
    GO:0038195    urokinase plasminogen activator signaling pathway    A series of molecular signals initiated by the binding of urokinase plasminogen activator to a receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
    GO:0031225    anchored component of membrane    The component of a membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005788    endoplasmic reticulum lumen    The volume enclosed by the membranes of the endoplasmic reticulum.
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0019898    extrinsic component of membrane    The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0071438    invadopodium membrane    The portion of the plasma membrane surrounding an invadopodium.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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        UPAR_HUMAN | Q034052fd6 2i9b 3bt1 3bt2 3u73 3u74 4k24 4qti

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