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(-) Description

Title :  STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION PA4535 FROM PSEUDOMONAS AERUGINOSA STRAIN PAO1, MONOOXYGENASE SUPERFAMILY
 
Authors :  B. P. Nocek, E. Evdokimova, A. Savchenko, A. Edwards, A. Joachimiak, Mi Center For Structural Genomics (Mcsg)
Date :  15 Nov 04  (Deposition) - 18 Jan 05  (Release) - 26 Nov 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Midwest Center For Structural Genomics, Mcsg, Pseudomonas Aeuruginosa Pao1, Protein Structure Initiative, Psi, Hypothetical Protein, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. P. Nocek, E. Evdokimova, A. Savchenko, A. Edwards, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
1. 75 A Crystal Structure Of The Hypothetical Protein Pa4535 From Pseudomonas Aeruginosa
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN PA4535
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PA4535
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: PAO1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1Y0K)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gln A:56 -Pro A:57
2Pro A:57 -Pro A:58

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1Y0K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1Y0K)

(-) Exons   (0, 0)

(no "Exon" information available for 1Y0K)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:180
 aligned with Q9HVP2_PSEAE | Q9HVP2 from UniProtKB/TrEMBL  Length:209

    Alignment length:209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         
         Q9HVP2_PSEAE     1 MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEYLRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL 209
               SCOP domains d1y0ka1 A:1-209 Hypothetical protein PA4535                                                                                                                                                                       SCOP domains
               CATH domains -1y0kA00 A:2-209 Hypothetical protein pa4535                                                                                                                                                                      CATH domains
               Pfam domains -DUF1780-1y0kA01 A:2-209                                                                                                                                                                                          Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhh.ee........eee..eeeeeeeee..-----------------------------..eeeehhhhhhhhhhhhhhhhhhhhhhh.hhhh.eeeeeee...eeee.......hhhhhhh...eeeee...eeeeeee....hhhhhh.....ee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1y0k A   1 mNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDE-----------------------------RPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEYLRQGWRSLSmVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL 209
                            |       10        20        30        40        50        60        70    |    -         -         -    |  110       120       130       140       150       160       170   |   180       190       200         
                            |                                                                        75                           105                                                                  174-MSE                               
                            1-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: DUF1780] (1)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  Cis Peptide Bonds
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