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(-) Description

Title :  FTSZ GMPCPP SOAK I213 (M. JANNASCHII)
 
Authors :  M. A. Oliva, S. C. Cordell, J. Lowe
Date :  06 Aug 04  (Deposition) - 01 Dec 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  1
Biol. Unit 1:  1  (3x)
Keywords :  Cell Division, Cell Division Protein, Cell-Division Protein, Complete Proteome, Ftsz, Gtp-Binding, Multigene Family, Septation, Tubulin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Oliva, S. C. Cordell, J. Lowe
Structural Insights Into Ftsz Protofilament Formation
Nat. Struct. Mol. Biol. V. 11 1243 2004
PubMed-ID: 15558053  |  Reference-DOI: 10.1038/NSMB855

(-) Compounds

Molecule 1 - CELL DIVISION PROTEIN FTSZ HOMOLOG 1
    Atcc: 43067
    Chains: 1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHIS17
    Expression System Strain: C41
    Expression System Taxid: 562
    Organism Scientific: METHANOCALDOCOCCUS JANNASCHII
    Organism Taxid: 2190
    Synonym: FTSZ

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : 1
Biological Unit 1 (3x): 1

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1G2P1Ligand/IonPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
2MG1Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1G2P3Ligand/IonPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY 1:46 , GLY 1:47 , ALA 1:48 , ALA 1:97 , GLY 1:98 , GLY 1:99 , GLY 1:133 , GLY 1:134 , THR 1:135 , GLY 1:136 , PRO 1:161 , GLU 1:165 , ARG 1:169 , PHE 1:208 , ALA 1:211 , ASP 1:212 , MG 1:1363 , HOH 1:2010 , HOH 1:2056 , HOH 1:2066 , HOH 1:2083 , HOH 1:2136BINDING SITE FOR RESIDUE G2P 11362
2AC2SOFTWAREGLN 1:75 , G2P 1:1362 , HOH 1:2023 , HOH 1:2136BINDING SITE FOR RESIDUE MG 11363

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1W58)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1W58)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1W58)

(-) PROSITE Motifs  (2, 2)

Asymmetric Unit (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FTSZ_1PS01134 FtsZ protein signature 1.FTSZ1_METJA70-104  11:70-104
2FTSZ_2PS01135 FtsZ protein signature 2.FTSZ1_METJA123-144  11:123-144
Biological Unit 1 (2, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FTSZ_1PS01134 FtsZ protein signature 1.FTSZ1_METJA70-104  31:70-104
2FTSZ_2PS01135 FtsZ protein signature 2.FTSZ1_METJA123-144  31:123-144

(-) Exons   (0, 0)

(no "Exon" information available for 1W58)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain 1 from PDB  Type:PROTEIN  Length:338
 aligned with FTSZ1_METJA | Q57816 from UniProtKB/Swiss-Prot  Length:364

    Alignment length:338
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352        
          FTSZ1_METJA    23 SPEDKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVPNMPLKLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATGALIHVMGPEDLTLEEAREVVATVSSRLDPNATIIWGATIDENLENTVRVLLVITGVQSRIEFTDTGLKRKKLELTG 360
               SCOP domains d1w5811 1:23-231 Cell-division protein FtsZ                                                                                                                                                                      d1w5812 1:232-354 Cell-division protein FtsZ                                                                               ------ SCOP domains
               CATH domains ---------------1w58101 1:38-249  [code=3.40.50.1440, no name defined]                                                                                                                                                              1w58102 1:250-361  [code=3.30.1330.20, no name defined]                                                         CATH domains
               Pfam domains ----------------Tubulin-1w58102 1:39-210                                                                                                                                                    ------------------------------------FtsZ_C-1w58101 1:247-341                                                                       ------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhh....eeeeee.hhhhhhh....eeee.............hhhhhhhhhhhhhhhhhhhhh...eeeeeee...hhhhhhhhhhhhhhhhh..eeeeeeee.hhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh..eeeeeeeeee...hhhhhhhhhhhh.............eeeeeee....hhhhhhhhhhhhhh.......eeeeeee.hhhh..eeeeeee..hhh.eeee..eeee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------FTSZ_1  PDB: 1:70-104              ------------------FTSZ_2  PDB: 1:123-144------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1w58 1  23 SPEDKELLEYLQQTKAKITVVGCGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVPNMPLKLAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATGALIHVMGPEDLTLEEAREVVATVSSRLDPNATIIWGATIDENLENTVRVLLVITGVQSRIEFTDTGLKRKKLELTG 361
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352    ||  
                                                                                                                                                                                                                                                                                                                                                                        357|  
                                                                                                                                                                                                                                                                                                                                                                         359
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (2, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 2)

Asymmetric Unit
(-)
Clan: Tubulin-like (34)

(-) Gene Ontology  (9, 9)

Asymmetric Unit(hide GO term definitions)
Chain 1   (FTSZ1_METJA | Q57816)
molecular function
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0003924    GTPase activity    Catalysis of the reaction: GTP + H2O = GDP + phosphate.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0043093    FtsZ-dependent cytokinesis    A cytokinesis process that involves a set of conserved proteins including FtsZ, and results in the formation of two similarly sized and shaped cells.
    GO:0007049    cell cycle    The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
    GO:0051301    cell division    The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.
    GO:0051258    protein polymerization    The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
cellular component
    GO:0032153    cell division site    The eventual plane of cell division (also known as cell cleavage or cytokinesis) in a dividing cell. In Eukaryotes, the cleavage apparatus, composed of septin structures and the actomyosin contractile ring, forms along this plane, and the mitotic, or meiotic, spindle is aligned perpendicular to the division plane. In bacteria, the cell division site is generally located at mid-cell and is the site at which the cytoskeletal structure, the Z-ring, assembles.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  1w58
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  FTSZ1_METJA | Q57816
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FTSZ1_METJA | Q57816: 1fsz 1w59 1w5a 1w5b 1w5e 2vap

(-) Related Entries Specified in the PDB File

1fsz CRYSTAL STRUCTURE OF THE CELL-DIVISION PROTEIN FTSZ AT 2.8ARESOLUTION
1w59 FTSZ DIMER, EMPTY (M. JANNASCHII)
1w5a FTSZ DIMER, MGGTP SOAK (M. JANNASCHII)
1w5b FTSZ DIMER, GTP SOAK (M. JANNASCHII)
1w5e FTSZ W319Y MUTANT, P1 (M. JANNASCHII)