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(-) Description

Title :  CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN
 
Authors :  Structural Genomix
Date :  03 Nov 03  (Deposition) - 25 Nov 03  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.31
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  E,F  (1x)
Biol. Unit 8:  A,B  (1x)
Biol. Unit 9:  C,D  (1x)
Keywords :  Structural Genomics, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Badger, J. M. Sauder, J. M. Adams, S. Antonysamy, K. Bain, M. G. Bergseid, S. G. Buchanan, M. D. Buchanan, Y. Batiyenko, J. A. Christopher, S. Emtage, A. Eroshkina, I. Feil, E. B. Furlong, K. S. Gajiwala, X. Gao, D. He, J. Hendle, A. Huber, K. Hoda, P. Kearins, C. Kissinger, B. Laubert, H. A. Lewis, J. Lin, K. Loomis, D. Lorimer, G. Louie, M. Maletic, C. D. Marsh, I. Miller, J. Molinari, H. J. Muller-Dieckmann, J. M. Newman, B. W. Noland, B. Pagarigan, F. Park, T. S. Peat, K. W. Post, S. Radojicic, A. Ramos, R. Romero, M. E. Rutter, W. E. Sanderson, K. D. Schwinn, J. Tresser, J. Winhoven, T. A. Wright, L. Wu, J. Xu, T. J. Harris
Structural Analysis Of A Set Of Proteins Resulting From A Bacterial Genomics Project
Proteins V. 60 787 2005
PubMed-ID: 16021622  |  Reference-DOI: 10.1002/PROT.20541

(-) Compounds

Molecule 1 - HYPOTHETICAL UPF0247 PROTEIN SAV0024/SA0023
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SAV0024, SA0023
    Organism Scientific: STAPHYLOCOCCUS AUREUS
    Organism Taxid: 1280

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F
Biological Unit 7 (1x):     EF
Biological Unit 8 (1x): AB    
Biological Unit 9 (1x):   CD  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1VH0)

(-) Sites  (0, 0)

(no "Site" information available for 1VH0)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1VH0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1VH0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1VH0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1VH0)

(-) Exons   (0, 0)

(no "Exon" information available for 1VH0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAA8 | Q2G252 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAA8     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0a_ A: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0A00 A:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee.........hhhhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 A   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain A from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAAU | P0C1V0 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAAU     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0a_ A: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0A00 A:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee.........hhhhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 A   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain B from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAA8 | Q2G252 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAA8     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0b_ B: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0B00 B:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee.........hhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 B   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain B from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAAU | P0C1V0 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAAU     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0b_ B: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0B00 B:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee.........hhhhhhhhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 B   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain C from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAA8 | Q2G252 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAA8     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0c_ C: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0C00 C:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 C   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain C from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAAU | P0C1V0 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAAU     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0c_ C: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0C00 C:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 C   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain D from PDB  Type:PROTEIN  Length:148
 aligned with RLMH_STAA8 | Q2G252 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAA8     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0d_ D: Hypothetical protein SAV0024/         SA0023                                                                                                       SCOP domains
               CATH domains 1vh0D00 D:1-157  [code=3.40.1280.10, no          name defined]                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee..---------hhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 D   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPD---------KEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
                                                                  40        50                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:148
 aligned with RLMH_STAAU | P0C1V0 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAAU     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0d_ D: Hypothetical protein SAV0024/         SA0023                                                                                                       SCOP domains
               CATH domains 1vh0D00 D:1-157  [code=3.40.1280.10, no          name defined]                                                                                                CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee..---------hhhhhhhhhhhhhhhhh.....eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 D   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPD---------KEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
                                                                  40        50                                                                                                           


Chain E from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAA8 | Q2G252 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAA8     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0e_ E: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0E00 E:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhh......eeeeeee.........hhhhhhhhhhhhhhhhhh......eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 E   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain E from PDB  Type:PROTEIN  Length:157
 aligned with RLMH_STAAU | P0C1V0 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAAU     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0e_ E: Hypothetical protein SAV0024/SA0023                                                                                                                SCOP domains
               CATH domains 1vh0E00 E:1-157  [code=3.40.1280.10, no name defined]                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhh......eeeeeee.........hhhhhhhhhhhhhhhhhh......eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 E   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       


Chain F from PDB  Type:PROTEIN  Length:154
 aligned with RLMH_STAA8 | Q2G252 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAA8     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0f_ F: Hypothetical protein SAV0024/SA00   23                                                                                                             SCOP domains
               CATH domains 1vh0F00 F:1-157  [code=3.40.1280.10, no name    defined]                                                                                                      CATH domains
           Pfam domains (1) -SPOUT_MTase-1vh0F01 F:2-157                                                                                                                                  Pfam domains (1)
           Pfam domains (2) -SPOUT_MTase-1vh0F02 F:2-157                                                                                                                                  Pfam domains (2)
           Pfam domains (3) -SPOUT_MTase-1vh0F03 F:2-157                                                                                                                                  Pfam domains (3)
           Pfam domains (4) -SPOUT_MTase-1vh0F04 F:2-157                                                                                                                                  Pfam domains (4)
           Pfam domains (5) -SPOUT_MTase-1vh0F05 F:2-157                                                                                                                                  Pfam domains (5)
           Pfam domains (6) -SPOUT_MTase-1vh0F06 F:2-157                                                                                                                                  Pfam domains (6)
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee......---hhhhhhhhhhhhhhhhhh......eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhh...eee.......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 F   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAP---SDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40   |   |50        60        70        80        90       100       110       120       130       140       150       
                                                                      44  48                                                                                                             


Chain F from PDB  Type:PROTEIN  Length:154
 aligned with RLMH_STAAU | P0C1V0 from UniProtKB/Swiss-Prot  Length:159

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           RLMH_STAAU     1 MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
               SCOP domains d1vh0f_ F: Hypothetical protein SAV0024/SA00   23                                                                                                             SCOP domains
               CATH domains 1vh0F00 F:1-157  [code=3.40.1280.10, no name    defined]                                                                                                      CATH domains
           Pfam domains (1) -SPOUT_MTase-1vh0F01 F:2-157                                                                                                                                  Pfam domains (1)
           Pfam domains (2) -SPOUT_MTase-1vh0F02 F:2-157                                                                                                                                  Pfam domains (2)
           Pfam domains (3) -SPOUT_MTase-1vh0F03 F:2-157                                                                                                                                  Pfam domains (3)
           Pfam domains (4) -SPOUT_MTase-1vh0F04 F:2-157                                                                                                                                  Pfam domains (4)
           Pfam domains (5) -SPOUT_MTase-1vh0F05 F:2-157                                                                                                                                  Pfam domains (5)
           Pfam domains (6) -SPOUT_MTase-1vh0F06 F:2-157                                                                                                                                  Pfam domains (6)
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhheeeeeee......---hhhhhhhhhhhhhhhhhh......eeeee.......hhhhhhhhhhhhhhh...eeeeee......hhhhhh...eee.......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1vh0 F   1 LKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAP---SDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVYRAFKIMRGEAY 157
                                    10        20        30        40   |   |50        60        70        80        90       100       110       120       130       140       150       
                                                                      44  48
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 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 6)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 6)

Asymmetric Unit
(-)
Clan: SPOUT (28)

(-) Gene Ontology  (7, 14)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (RLMH_STAAU | P0C1V0)
molecular function
    GO:0008168    methyltransferase activity    Catalysis of the transfer of a methyl group to an acceptor molecule.
    GO:0070038    rRNA (pseudouridine-N3-)-methyltransferase activity    Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methylpseudouridine.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0032259    methylation    The process in which a methyl group is covalently attached to a molecule.
    GO:0031167    rRNA methylation    The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.
    GO:0006364    rRNA processing    Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D,E,F   (RLMH_STAA8 | Q2G252)
molecular function
    GO:0008168    methyltransferase activity    Catalysis of the transfer of a methyl group to an acceptor molecule.
    GO:0070038    rRNA (pseudouridine-N3-)-methyltransferase activity    Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methylpseudouridine.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0032259    methylation    The process in which a methyl group is covalently attached to a molecule.
    GO:0031167    rRNA methylation    The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.
    GO:0006364    rRNA processing    Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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  RLMH_STAA8 | Q2G252
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  RLMH_STAAU | P0C1V0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RLMH_STAAU | P0C1V0: 4fak

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