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Summary Information (see also Sequences/Alignments below) |
Asymmetric Unit (4, 16)
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Asymmetric Unit (16, 16)
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(no "SS Bond" information available for 1VG9) |
(no "Cis Peptide Bond" information available for 1VG9) |
(no "SAP(SNP)/Variant" information available for 1VG9) |
(no "PROSITE Motif" information available for 1VG9) |
Asymmetric Unit (5, 20)
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Asymmetric UnitChain A from PDB Type:PROTEIN Length:501 aligned with RAE1_RAT | P37727 from UniProtKB/Swiss-Prot Length:650 Alignment length:613 11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531 541 551 561 571 581 591 601 611 RAE1_RAT 2 ADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPGSFGVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLD 614 SCOP domains -d1vg9a1 A:3-444,A:558-606 Rab escort protein 1 d1vg9a2 A:445-557 Rab escort protein 1 d1vg9a1 A:3-444,A:558-606 Rab escort protein 1 -------- SCOP domains CATH domains 1vg9A01 A:2-92,A:370-446,A:554-601 [code=3.50.50.60, no name defined] 1vg9A02 A:93-27 0,A:447-553 1vg9A03 A:271-369 Guanine Nucleotide Dissociation Inhibitor, domain 1 1vg9A01 A:2-92,A:370-446,A:554-601 [code=3.50.50.60, no name defined] 1vg9A02 A:93-270,A:447-553 Guanine Nucleotide Dissociation Inhibitor, domain 2 1vg9A01 A:2-92,A:370-446,A:554-601 ------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vg9 A 2 ADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQ----------MWQEQILENEEAIPLSSKDKTIQHVEVFCYASQD------------------------------------------------------------------------------------------------------NRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLD 614 11 21 31 41 51 61 | - | 81 91 101 | - - - - - - - - - - 211 221 231 241 251 261 271 281 291 301 311 321 331 341 351 361 371 381 391 401 411 421 431 441 451 461 471 481 491 501 511 521 531 541 551 561 571 581 591 601 611 63 74 107 210 Chain B from PDB Type:PROTEIN Length:169 aligned with RAB7A_RAT | P09527 from UniProtKB/Swiss-Prot Length:207 Alignment length:174 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 RAB7A_RAT 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 SCOP domains d1vg9b_ B: Rab7 SCOP domains CATH domains 1vg9B00 B:6-179 P-loop contain ing nucleotide triphosphate hydrolases CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript 1 (1) Exon 1.1 ------------------------------------------Exon 1.3 PDB: B:61-133 UniProt: 61-133 Exon 1.4 PDB: B:134-176 UniProt: 134-176 1.5 Transcript 1 (1) Transcript 1 (2) ------------Exon 1.2 PDB: B:18-60 (gaps) ----------------------------------------------------------------------------------------------------------------------- Transcript 1 (2) 1vg9 B 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSN-----IGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 15 25 35 | 45 55 65 75 85 95 105 115 125 135 145 155 165 175 35 41 Chain C from PDB Type:PROTEIN Length:502 aligned with RAE1_RAT | P37727 from UniProtKB/Swiss-Prot Length:650 Alignment length:613 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532 542 552 562 572 582 592 602 612 RAE1_RAT 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPGSFGVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLDG 615 SCOP domains d1vg9c1 C:3-444,C:558-606 Rab escort protein 1 d1vg9c2 C:445-557 Rab escort protein 1 d1vg9c1 C:3-444,C:558-606 Rab escort protein 1 --------- SCOP domains CATH domains 1vg9C01 C:3-92,C:370-446,C:554-601 [code=3.50.50.60, no name defined] 1vg9C02 C:93-27 0,C:447-553 1vg9C03 C:271-369 Guanine Nucleotide Dissociation Inhibitor, domain 1 1vg9C01 C:3-92,C:370-446,C:554-601 [code=3.50.50.60, no name defined] 1vg9C02 C:93-270,C:447-553 Guanine Nucleotide Dissociation Inhibitor, domain 2 1vg9C01 C:3-92,C:370-446,C:554-601 -------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vg9 C 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQD-------------------------------------------------------------------------------------------------------RITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTE--------EKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLDG 615 12 22 32 42 52 62 72 82 92 102 | - - - - - - - - - - 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 | - |542 552 562 572 582 592 602 612 107 211 530 539 Chain D from PDB Type:PROTEIN Length:173 aligned with RAB7A_RAT | P09527 from UniProtKB/Swiss-Prot Length:207 Alignment length:176 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 RAB7A_RAT 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 SCOP domains d1vg9d_ D: Rab7 SCOP domains CATH domains 1vg9D00 D:6-181 P-loop containin g nucleotide triphosphate hydrolases CATH domains Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1 ------------------------------------------Exon 1.3 PDB: D:61-133 UniProt: 61-133 Exon 1.4 PDB: D:134-176 UniProt: 134-176 1.5 Transcript 1 (1) Transcript 1 (2) ------------Exon 1.2 PDB: D:18-60 (gaps) ------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2) 1vg9 D 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQY---IGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 15 25 35 | | 45 55 65 75 85 95 105 115 125 135 145 155 165 175 37 41 Chain E from PDB Type:PROTEIN Length:500 aligned with RAE1_RAT | P37727 from UniProtKB/Swiss-Prot Length:650 Alignment length:612 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532 542 552 562 572 582 592 602 612 RAE1_RAT 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPGSFGVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLD 614 SCOP domains d1vg9e1 E:3-444,E:558-606 Rab escort protein 1 d1vg9e2 E:445-557 Rab escort protein 1 d1vg9e1 E:3-444,E:558-606 Rab escort protein 1 -------- SCOP domains CATH domains 1vg9E01 E:3-92,E:370-446,E:554-601 [code=3.50.50.60, no name defined] 1vg9E02 E:93-27 0,E:447-553 1vg9E03 E:271-369 Guanine Nucleotide Dissociation Inhibitor, domain 1 1vg9E01 E:3-92,E:370-446,E:554-601 [code=3.50.50.60, no name defined] 1vg9E02 E:93-270,E:447-553 Guanine Nucleotide Dissociation Inhibitor, domain 2 1vg9E01 E:3-92,E:370-446,E:554-601 ------------- CATH domains Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1vg9 E 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQ----------MWQEQILENEEAIPLSSKDKTIQHVEVFCYASQD------------------------------------------------------------------------------------------------------NRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLD 614 12 22 32 42 52 62| - | 82 92 102 | - - - - - - - - - - 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532 542 552 562 572 582 592 602 612 63 74 107 210 Chain F from PDB Type:PROTEIN Length:168 aligned with RAB7A_RAT | P09527 from UniProtKB/Swiss-Prot Length:207 Alignment length:173 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 RAB7A_RAT 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 SCOP domains d1vg9f_ F: Rab7 SCOP domains CATH domains 1vg9F00 F:6-178 P-loop contain ing nucleotide triphosphate hydrolases CATH domains Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1 ------------------------------------------Exon 1.3 PDB: F:61-133 UniProt: 61-133 Exon 1.4 PDB: F:134-176 UniProt: 134-176 1. Transcript 1 (1) Transcript 1 (2) ------------Exon 1.2 PDB: F:18-60 (gaps) ---------------------------------------------------------------------------------------------------------------------- Transcript 1 (2) 1vg9 F 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSN-----IGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 15 25 35 | 45 55 65 75 85 95 105 115 125 135 145 155 165 175 35 41 Chain G from PDB Type:PROTEIN Length:502 aligned with RAE1_RAT | P37727 from UniProtKB/Swiss-Prot Length:650 Alignment length:613 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 532 542 552 562 572 582 592 602 612 RAE1_RAT 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPGSFGVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLDG 615 SCOP domains d1vg9g1 G:3-444,G:558-606 Rab escort protein 1 d1vg9g2 G:445-557 Rab escort protein 1 d1vg9g1 G:3-444,G:558-606 Rab escort protein 1 --------- SCOP domains CATH domains 1vg9G01 G:3-92,G:370-446,G:554-601 [code=3.50.50.60, no name defined] 1vg9G02 G:93-27 0,G:447-553 1vg9G03 G:271-369 Guanine Nucleotide Dissociation Inhibitor, domain 1 1vg9G01 G:3-92,G:370-446,G:554-601 [code=3.50.50.60, no name defined] 1vg9G02 G:93-270,G:447-553 Guanine Nucleotide Dissociation Inhibitor, domain 2 1vg9G01 G:3-92,G:370-446,G:554-601 -------------- CATH domains Pfam domains (1) --------------------------------------------------------------------------------------------------------- GDI-1vg9G01 G:211-542 ------------------------------------------------------------------------- Pfam domains (1) Pfam domains (2) --------------------------------------------------------------------------------------------------------- GDI-1vg9G02 G:211-542 ------------------------------------------------------------------------- Pfam domains (2) Pfam domains (3) --------------------------------------------------------------------------------------------------------- GDI-1vg9G03 G:211-542 ------------------------------------------------------------------------- Pfam domains (3) Pfam domains (4) --------------------------------------------------------------------------------------------------------- GDI-1vg9G04 G:211-542 ------------------------------------------------------------------------- Pfam domains (4) Pfam domains (5) --------------------------------------------------------------------------------------------------------- GDI-1vg9G05 G:211-542 ------------------------------------------------------------------------- Pfam domains (5) Pfam domains (6) --------------------------------------------------------------------------------------------------------- GDI-1vg9G06 G:211-542 ------------------------------------------------------------------------- Pfam domains (6) Pfam domains (7) --------------------------------------------------------------------------------------------------------- GDI-1vg9G07 G:211-542 ------------------------------------------------------------------------- Pfam domains (7) Pfam domains (8) --------------------------------------------------------------------------------------------------------- GDI-1vg9G08 G:211-542 ------------------------------------------------------------------------- Pfam domains (8) SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1vg9 G 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQD-------------------------------------------------------------------------------------------------------RITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTE--------EKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPNPEDIVLDG 615 12 22 32 42 52 62 72 82 92 102 | - - - - - - - - - - 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432 442 452 462 472 482 492 502 512 522 | - |542 552 562 572 582 592 602 612 107 211 530 539 Chain H from PDB Type:PROTEIN Length:173 aligned with RAB7A_RAT | P09527 from UniProtKB/Swiss-Prot Length:207 Alignment length:176 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 RAB7A_RAT 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 SCOP domains d1vg9h_ H: Rab7 SCOP domains CATH domains 1vg9H00 H:6-181 P-loop containin g nucleotide triphosphate hydrolases CATH domains Pfam domains (1) ----Ras-1vg9H01 H:10-175 ------ Pfam domains (1) Pfam domains (2) ----Ras-1vg9H02 H:10-175 ------ Pfam domains (2) Pfam domains (3) ----Ras-1vg9H03 H:10-175 ------ Pfam domains (3) Pfam domains (4) ----Ras-1vg9H04 H:10-175 ------ Pfam domains (4) SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE Transcript 1 (1) Exon 1.1 ------------------------------------------Exon 1.3 PDB: H:61-133 UniProt: 61-133 Exon 1.4 PDB: H:134-176 UniProt: 134-176 1.5 Transcript 1 (1) Transcript 1 (2) ------------Exon 1.2 PDB: H:18-60 (gaps) ------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2) 1vg9 H 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQY---IGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 15 25 35 | | 45 55 65 75 85 95 105 115 125 135 145 155 165 175 37 41
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit
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Asymmetric Unit(hide GO term definitions) Chain A,C,E,G (RAE1_RAT | P37727)
Chain B,D,F,H (RAB7A_RAT | P09527)
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