Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  STRUCTURE OF THE 6-PHOSPHO-BETA GLUCOSIDASE FROM THERMOTOGA MARITIMA AT 2.4 ANGSTROM RESOLUTION IN THE TETRAGONAL FORM WITH NAD AND GLUCOSE-6-PHOSPHATE
 
Authors :  A. Varrot, V. L. Yip, S. G. Withers, G. J. Davies
Date :  29 Sep 03  (Deposition) - 18 Nov 04  (Release) - 28 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Keywords :  Hydrolase, 6-Phospho-Beta-Glucosidase, Family4 Hydrolase, Nad Dependent (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Varrot, V. L. Yip, Y. Li, S. S. Rajan, X. Yang, W. F. Anderson, J. Thompson, S. G. Withers, G. J. Davies
Nad+ And Metal-Ion Dependent Hydrolysis By Family 4 Glycosidases: Structural Insight Into Specificity For Phospho-Beta-D-Glucosides
J. Mol. Biol. V. 346 423 2005
PubMed-ID: 15670594  |  Reference-DOI: 10.1016/J.JMB.2004.11.058

(-) Compounds

Molecule 1 - 6-PHOSPHO-BETA-GLUCOSIDASE
    Atcc: 43589
    Chains: A, B, C, D, E, F, G, H
    EC Number: 3.2.1.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET16B
    Expression System Strain: B834
    Expression System Taxid: 562
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Other Details: SYNTHETIC GENE
    Strain: MSB8

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABCD    
Biological Unit 2 (1x):     EFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 18)

Asymmetric Unit (3, 18)
No.NameCountTypeFull Name
1G6P8Ligand/IonALPHA-D-GLUCOSE-6-PHOSPHATE
2NAD8Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
3SO42Ligand/IonSULFATE ION
Biological Unit 1 (3, 10)
No.NameCountTypeFull Name
1G6P4Ligand/IonALPHA-D-GLUCOSE-6-PHOSPHATE
2NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
3SO42Ligand/IonSULFATE ION
Biological Unit 2 (2, 8)
No.NameCountTypeFull Name
1G6P4Ligand/IonALPHA-D-GLUCOSE-6-PHOSPHATE
2NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
3SO4-1Ligand/IonSULFATE ION

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:12 , ARG A:87 , GLU A:103 , ASN A:140 , ASN A:163 , HIS A:192 , TYR A:241 , ARG A:261 , VAL A:265 , ARG A:289 , GLY A:290 , TYR A:294 , NAD A:1416BINDING SITE FOR RESIDUE G6P A1417
02AC2SOFTWAREARG B:87 , GLU B:103 , ASN B:140 , ASN B:163 , VAL B:164 , HIS B:192 , TYR B:241 , ARG B:261 , ARG B:289 , GLY B:290 , TYR B:294 , NAD B:1416BINDING SITE FOR RESIDUE G6P B1417
03AC3SOFTWARETYR C:12 , ARG C:87 , GLU C:103 , ASN C:140 , ASN C:163 , HIS C:192 , TYR C:241 , ARG C:261 , VAL C:265 , ARG C:289 , GLY C:290 , TYR C:294 , NAD C:1416BINDING SITE FOR RESIDUE G6P C1417
04AC4SOFTWARETYR D:12 , ARG D:87 , GLU D:103 , ASN D:140 , CYS D:162 , ASN D:163 , VAL D:164 , HIS D:192 , TYR D:241 , ARG D:261 , VAL D:265 , ARG D:289 , GLY D:290 , GLY D:291 , TYR D:294 , NAD D:1416BINDING SITE FOR RESIDUE G6P D1417
05AC5SOFTWARETYR E:12 , ARG E:87 , GLU E:103 , ASN E:140 , ASN E:163 , HIS E:192 , TYR E:241 , ARG E:261 , ARG E:289 , GLY E:290 , TYR E:294 , NAD E:1416BINDING SITE FOR RESIDUE G6P E1417
06AC6SOFTWAREARG F:87 , ASN F:140 , ASN F:163 , HIS F:192 , TYR F:241 , ARG F:261 , ARG F:289 , GLY F:290 , TYR F:294 , NAD F:1416BINDING SITE FOR RESIDUE G6P F1417
07AC7SOFTWAREARG G:87 , ASN G:140 , ASN G:163 , HIS G:192 , TYR G:241 , ARG G:261 , ARG G:289 , GLY G:290 , TYR G:294 , NAD G:1416BINDING SITE FOR RESIDUE G6P G1417
08AC8SOFTWAREARG H:87 , GLU H:103 , ASN H:140 , CYS H:162 , ASN H:163 , HIS H:192 , TYR H:241 , ARG H:261 , VAL H:265 , GLY H:290 , TYR H:294 , NAD H:1416BINDING SITE FOR RESIDUE G6P H1417
09AC9SOFTWAREASP A:393 , HOH A:2149 , GLU B:248BINDING SITE FOR RESIDUE SO4 A1418
10BC1SOFTWAREGLU C:248 , PRO C:389 , GLY C:391 , HOH D:2041BINDING SITE FOR RESIDUE SO4 C1418
11BC2SOFTWAREGLY A:9 , SER A:10 , TYR A:12 , ASP A:36 , ILE A:37 , LYS A:41 , GLN A:78 , PHE A:79 , ARG A:80 , GLU A:103 , TYR A:123 , PHE A:138 , ASN A:140 , GLU A:269 , ARG A:289 , GLY A:291 , TYR A:294 , G6P A:1417 , HOH A:2095 , HOH A:2145 , HOH A:2146 , HOH A:2147 , HOH A:2148BINDING SITE FOR RESIDUE NAD A1416
12BC3SOFTWAREGLY B:7 , GLY B:9 , SER B:10 , TYR B:12 , ASP B:36 , ILE B:37 , ASP B:38 , LYS B:41 , GLN B:78 , PHE B:79 , ARG B:80 , GLU B:103 , ILE B:119 , TYR B:123 , PHE B:138 , ASN B:140 , GLU B:269 , ARG B:289 , TYR B:294 , G6P B:1417 , HOH B:2009BINDING SITE FOR RESIDUE NAD B1416
13BC4SOFTWAREGLY C:9 , SER C:10 , TYR C:12 , ASP C:36 , ILE C:37 , LYS C:41 , GLN C:78 , PHE C:79 , ARG C:80 , GLU C:103 , TYR C:123 , PHE C:138 , THR C:139 , ASN C:140 , GLU C:269 , ARG C:289 , TYR C:294 , G6P C:1417 , HOH C:2106 , HOH C:2107BINDING SITE FOR RESIDUE NAD C1416
14BC5SOFTWAREGLY D:7 , GLY D:9 , SER D:10 , TYR D:12 , TYR D:35 , ASP D:36 , ILE D:37 , ASP D:38 , LYS D:41 , GLN D:78 , PHE D:79 , ARG D:80 , GLU D:103 , ILE D:119 , TYR D:123 , PHE D:138 , ASN D:140 , GLY D:291 , TYR D:294 , SER D:295 , G6P D:1417 , HOH D:2091BINDING SITE FOR RESIDUE NAD D1416
15BC6SOFTWAREGLY E:7 , SER E:10 , TYR E:12 , ASP E:36 , ILE E:37 , GLN E:78 , PHE E:79 , ARG E:80 , GLU E:103 , TYR E:123 , PHE E:138 , ASN E:140 , ARG E:289 , TYR E:294 , G6P E:1417BINDING SITE FOR RESIDUE NAD E1416
16BC7SOFTWAREGLY F:7 , GLY F:9 , SER F:10 , TYR F:12 , ASP F:36 , ILE F:37 , ASP F:38 , GLN F:78 , PHE F:79 , ARG F:80 , GLU F:103 , ILE F:119 , TYR F:123 , PHE F:138 , ASN F:140 , GLU F:269 , ARG F:289 , TYR F:294 , G6P F:1417BINDING SITE FOR RESIDUE NAD F1416
17BC8SOFTWAREGLY G:9 , SER G:10 , TYR G:12 , TYR G:35 , ASP G:36 , ILE G:37 , LYS G:41 , GLN G:78 , PHE G:79 , ARG G:80 , GLU G:103 , ILE G:119 , TYR G:123 , PHE G:138 , ASN G:140 , GLU G:269 , ARG G:289 , TYR G:294 , G6P G:1417 , HOH G:2008BINDING SITE FOR RESIDUE NAD G1416
18BC9SOFTWAREGLY H:9 , SER H:10 , TYR H:12 , ASP H:36 , ILE H:37 , ASP H:38 , LYS H:41 , GLN H:78 , PHE H:79 , ARG H:80 , GLU H:103 , TYR H:123 , PHE H:138 , ASN H:140 , ARG H:289 , GLY H:291 , TYR H:294 , G6P H:1417 , HOH H:2005BINDING SITE FOR RESIDUE NAD H1416

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1UP7)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Asn A:140 -Pro A:141
2Asn B:140 -Pro B:141
3Asn C:140 -Pro C:141
4Asn D:140 -Pro D:141
5Asn E:140 -Pro E:141
6Asn F:140 -Pro F:141
7Asn G:140 -Pro G:141
8Asn H:140 -Pro H:141

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1UP7)

(-) PROSITE Motifs  (1, 8)

Asymmetric Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F4PS01324 Glycosyl hydrolases family 4 signature.BGLT_THEMA131-162
 
 
 
 
 
 
 		  8A:131-162
B:131-162
C:131-162
D:131-162
E:131-162
F:131-162
G:131-162
H:131-162
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F4PS01324 Glycosyl hydrolases family 4 signature.BGLT_THEMA131-162
 
 
 
 
 
 
 		  4A:131-162
B:131-162
C:131-162
D:131-162
-
-
-
-
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1GLYCOSYL_HYDROL_F4PS01324 Glycosyl hydrolases family 4 signature.BGLT_THEMA131-162
 
 
 
 
 
 
 		  4-
-
-
-
E:131-162
F:131-162
G:131-162
H:131-162

(-) Exons   (0, 0)

(no "Exon" information available for 1UP7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:414
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:417
                              1                                                                                                                                                                                                                                                                                                                                                                                                                              
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       
           BGLT_THEMA     - --MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains --d1up7a1 A:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7a2 A:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhh..---......hhhhhhhhh.ee...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhh...hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 A  -1 RHMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLK---IPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208        |-  |    228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       
                                                                                                                                                                                                                                                    217 221                                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:409
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7b1 B:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7b2 B:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhh..------...hhhhhhhhh.ee...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhh...hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 B   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLK------EDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210      |  -   |   230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                                                                                                                                                                                                  217    224                                                                                                                                                                                               


Chain C from PDB  Type:PROTEIN  Length:409
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7c1 C:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7c2 C:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhh..------...hhhhhhhhh.ee...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhh...hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 C   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLK------EDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210      |  -   |   230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                                                                                                                                                                                                  217    224                                                                                                                                                                                               


Chain D from PDB  Type:PROTEIN  Length:409
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7d1 D:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7d2 D:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhhh------....hhhhhhhhh.ee...hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.....hhhhh.....hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 D   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKL------DEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     |   -  |    230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                                                                                                                                                                                                 216    223                                                                                                                                                                                                


Chain E from PDB  Type:PROTEIN  Length:406
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7e1 E:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7e2 E:163- 415 6-phospho-beta-glucosidase                                                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhh--..eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh-.hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhh.------....hhhhhhhhh.ee...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhh...hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 E   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV--RFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMF-ARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKL------DEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50  |  |  60        70        80        90       100       110       120       130       140       150       160       170     | 180       190       200       210     |   -  |    230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                               53 56                                                                                                                     176 |                                   216    223                                                                                                                                                                                                
                                                                                                                                                                                                           178                                                                                                                                                                                                                                             


Chain F from PDB  Type:PROTEIN  Length:411
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7f1 F:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7f2 F:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhh..----.....hhhhhhhhh.ee...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhh...hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 F   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLK----PDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210      |  - |     230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                                                                                                                                                                                                  217  222                                                                                                                                                                                                 


Chain G from PDB  Type:PROTEIN  Length:409
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7g1 G:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7g2 G:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhh..------...hhhhhhhhh.ee...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhh...hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 G   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLK------EDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210      |  -   |   230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                                                                                                                                                                                                  217    224                                                                                                                                                                                               


Chain H from PDB  Type:PROTEIN  Length:407
 aligned with BGLT_THEMA | Q9X108 from UniProtKB/Swiss-Prot  Length:415

    Alignment length:415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410     
           BGLT_THEMA     1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELTKRGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
               SCOP domains d1up7h1 H:1-162 6-phospho-beta-glucosidase                                                                                                                        d1up7h2 H:163-415 6-phospho-beta-glucosidase                                                                                                                                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -Glyco_hydro_4-1up7H09 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H01 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (1)
           Pfam domains (2) -Glyco_hydro_4-1up7H10 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H02 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (2)
           Pfam domains (3) -Glyco_hydro_4-1up7H11 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H03 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (3)
           Pfam domains (4) -Glyco_hydro_4-1up7H12 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H04 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (4)
           Pfam domains (5) -Glyco_hydro_4-1up7H13 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H05 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (5)
           Pfam domains (6) -Glyco_hydro_4-1up7H14 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H06 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (6)
           Pfam domains (7) -Glyco_hydro_4-1up7H15 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H07 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (7)
           Pfam domains (8) -Glyco_hydro_4-1up7H16 H:2-178                                                                                                                                                    --Glyco_hydro_4C-1up7H08 H:181-391                                                                                                                                                                                   ------------------------ Pfam domains (8)
         Sec.struct. author .eeeee.....hhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhhhhh...eeee..hhhhhhh...eeee....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh...eeee...hhhhhhhhhhhh.....eee..hhhhhhhhhhhhhh..hhh.eeeeeeee..eeeeeeeee..eehhhhhhhhhhh-------...hhhhhhhhh.ee...hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh......hhhhh-....hhhhhhhhhhhhhhh...eeeeeeee............eeeeeeeee..eeee......hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F4              ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1up7 H   1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTSNATIVNFTNPSGHITEFVRNYLEYEKFIGLCNVPINFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGEDVTEKVFENLKL-------EDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELT-RGGSMYSTAAAHLIRDLETDEGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQGKGDHFALSFIHAVKMYERLTIEAYLKRSKKLALKALLSHPLGPDVEDAKDLLEEILEANREYVKLG 415
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     |   -   |   230       240       250       260       270       280      |290       300       310       320       330       340       350       360       370       380       390       400       410     
                                                                                                                                                                                                                                                 216     224                                                            287 |                                                                                                                              
                                                                                                                                                                                                                                                                                                                          289
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 16)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1UP7)

(-) Pfam Domains  (2, 16)

Asymmetric Unit
(-)
Clan: LDH_C (56)
(-)
Clan: NADP_Rossmann (1239)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (BGLT_THEMA | Q9X108)
molecular function
    GO:0008706    6-phospho-beta-glucosidase activity    Catalysis of the reaction: 6-phospho-beta-D-glucoside-(1,4)-D-glucose + H2O = D-glucose 6-phosphate + glucose.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016616    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    G6P  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAD  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Asn A:140 - Pro A:141   [ RasMol ]  
    Asn B:140 - Pro B:141   [ RasMol ]  
    Asn C:140 - Pro C:141   [ RasMol ]  
    Asn D:140 - Pro D:141   [ RasMol ]  
    Asn E:140 - Pro E:141   [ RasMol ]  
    Asn F:140 - Pro F:141   [ RasMol ]  
    Asn G:140 - Pro G:141   [ RasMol ]  
    Asn H:140 - Pro H:141   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1up7
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  BGLT_THEMA | Q9X108
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.6
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  BGLT_THEMA | Q9X108
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BGLT_THEMA | Q9X108: 1up4 1up6

(-) Related Entries Specified in the PDB File

1up4 STRUCTURE OF THE 6-PHOSPHO-BETA GLUCOSIDASE FROM THERMOTOGA MARITIMA AT 2.85 ANGSTROM RESOLUTION IN THE MONOCLINIC FORM
1up6 STRUCTURE OF THE 6-PHOSPHO-BETA GLUCOSIDASE FROM THERMOTOGA MARITIMA AT 2.55 ANGSTROM RESOLUTION IN THE TETRAGONAL FORM