Chain A from PDB Type:PROTEIN Length:141
aligned with SCAFD_BPPHS | P69486 from UniProtKB/Swiss-Prot Length:152
Alignment length:141
13 23 33 43 53 63 73 83 93 103 113 123 133 143
SCAFD_BPPHS 4 VTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQ 144
SCOP domains ---d1tx9a1 A:7-144 Scaffolding protein gpD of bacteriophage procapsid SCOP domains
CATH domains 1tx9A00 A:4-144 Procapsid Of Bacteriophage Phix174, Chain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tx9 A 4 VTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQ 144
13 23 33 43 53 63 73 83 93 103 113 123 133 143
Chain A from PDB Type:PROTEIN Length:141
aligned with SCAFD_BPS13 | P69487 from UniProtKB/Swiss-Prot Length:152
Alignment length:141
13 23 33 43 53 63 73 83 93 103 113 123 133 143
SCAFD_BPS13 4 VTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQ 144
SCOP domains ---d1tx9a1 A:7-144 Scaffolding protein gpD of bacteriophage procapsid SCOP domains
CATH domains 1tx9A00 A:4-144 Procapsid Of Bacteriophage Phix174, Chain 1 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhh.....hhhhhhhhhhhhhhh.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1tx9 A 4 VTEQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVLTDAEENVRQ 144
13 23 33 43 53 63 73 83 93 103 113 123 133 143
Chain B from PDB Type:PROTEIN Length:130
aligned with SCAFD_BPPHS | P69486 from UniProtKB/Swiss-Prot Length:152
Alignment length:130
15 25 35 45 55 65 75 85 95 105 115 125 135
SCAFD_BPPHS 6 EQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVL 135
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1tx9B00 B:6-135 Procapsid Of Bacteriophage Phix174, Chain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhh..hhhhhhhhh.......hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhh...............hhhhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1tx9 B 6 EQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVL 135
15 25 35 45 55 65 75 85 95 105 115 125 135
Chain B from PDB Type:PROTEIN Length:130
aligned with SCAFD_BPS13 | P69487 from UniProtKB/Swiss-Prot Length:152
Alignment length:130
15 25 35 45 55 65 75 85 95 105 115 125 135
SCAFD_BPS13 6 EQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVL 135
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains 1tx9B00 B:6-135 Procapsid Of Bacteriophage Phix174, Chain 1 CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhh..hhhhhhhhh.......hhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhh...............hhhhhhhhhhhhhhh..... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------- Transcript
1tx9 B 6 EQSVRFQTALASIKLIQASAVLDLTEDDFDFLTSNKVWIATDRSRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFTENIINGVERPVKAAELFAFTLRVRAGNTDVL 135
15 25 35 45 55 65 75 85 95 105 115 125 135
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |