1RWI - JenaLib

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Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   EXTRACELLULAR DOMAIN OF MYCOBACTERIUM TUBERCULOSIS PKND

Authors :   M. C. Good, A. E. Greenstein, T. A. Young, H. L. Ng, T. Alber, Tb Structural Genomics Consortium (Tbsgc)

Date :   16 Dec 03 (Deposition) - 27 Apr 04 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym. Unit : A,B
Biol. Unit 1: B  (1x)
Biol. Unit 2: A  (1x)

Keywords :   Beta Propeller, Structural Genomics, Psi, Protein Structure Initiative, Tb Structural Genomics Consortium, Tbsgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. C. Good, A. E. Greenstein, T. A. Young, H. L. Ng, T. Alber
Sensor Domain Of The Mycobacterium Tuberculosis Receptor Ser/Thr Protein Kinase, Pknd, Forms A Highly Symmetric Beta Propeller.
J. Mol. Biol. V. 339 459 2004
PubMed-ID: 15136047 | Reference-DOI: 10.1016/J.JMB.2004.03.063
(for further references see the PDB file header)

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE PKND
	Chains	:	B, A
	EC Number	:	2.7.1.37
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET24B
	Expression System Strain	:	BL21 CODON +
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	PKND 403-665
	Gene	:	PKND, RV0931C, MT0958, MTCY08C9.08
	Organism Scientific	:	MYCOBACTERIUM TUBERCULOSIS
	Organism Taxid	:	1773

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:		B
Biological Unit 2 (1x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 14)

No.	Name	Count	Type	Full Name
1	CD	14	Ligand/Ion	CADMIUM ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	CD	-1	Ligand/Ion	CADMIUM ION

Asymmetric Unit (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLU A:264 , HIS A:267 , ASP B:151 , HOH B:1304 , HOH B:1322	BINDING SITE FOR RESIDUE CD A 1001
02	AC2	SOFTWARE	HIS A:265 , HIS A:266 , HOH A:1267	BINDING SITE FOR RESIDUE CD A 1002
03	AC3	SOFTWARE	HIS A:268 , HIS A:269 , HIS A:270 , GLU B:42 , HOH B:1306 , HOH B:1365	BINDING SITE FOR RESIDUE CD A 1003
04	AC4	SOFTWARE	ASP A:244 , HOH A:1229 , ASP B:169	BINDING SITE FOR RESIDUE CD B 1004
05	AC5	SOFTWARE	ASP A:169 , ASP B:244 , HIS B:269 , HOH B:1354 , HOH B:1370	BINDING SITE FOR RESIDUE CD B 1101
06	AC6	SOFTWARE	ASP A:151 , GLU B:264 , HIS B:267 , HOH B:1312 , HOH B:1320	BINDING SITE FOR RESIDUE CD B 1102
07	AC7	SOFTWARE	HIS B:265 , HIS B:266	BINDING SITE FOR RESIDUE CD B 1103
08	AC8	SOFTWARE	GLU A:42 , HIS B:268 , HIS B:270 , HOH B:1314 , HOH B:1351	BINDING SITE FOR RESIDUE CD B 1104
09	AC9	SOFTWARE	HIS A:270 , GLU B:111 , ASP B:153	BINDING SITE FOR RESIDUE CD B 1201
10	BC1	SOFTWARE	HIS A:269 , HIS B:210	BINDING SITE FOR RESIDUE CD A 1202
11	BC2	SOFTWARE	ASN B:150 , ASP B:151 , ASP B:169 , HOH B:1356	BINDING SITE FOR RESIDUE CD B 1203
12	BC3	SOFTWARE	GLU A:111 , ASP A:153	BINDING SITE FOR RESIDUE CD B 1301
13	BC4	SOFTWARE	HIS B:269	BINDING SITE FOR RESIDUE CD B 1302
14	BC5	SOFTWARE	ASN A:150 , ASP A:151 , ASP A:169	BINDING SITE FOR RESIDUE CD B 1303

(no "SS Bond" information available for 1RWI)

(no "Cis Peptide Bond" information available for 1RWI)

(no "SAP(SNP)/Variant" information available for 1RWI)

Asymmetric Unit (1, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NHL	PS51125	NHL repeat profile.	PKND_MYCTO	414-456 498-539 461-497 540-581 624-664 582-623	12	A:12-52 B:12-52 A:96-137 B:96-137 A:59-95 B:59-95 A:138-179 B:138-179 A:222-262 B:222-262 A:180-221 B:180-221
1	NHL	PS51125	NHL repeat profile.	PKND_MYCTU	414-456 498-539 461-497 540-581 624-664 582-623	12	A:12-52 B:12-52 A:96-137 B:96-137 A:59-95 B:59-95 A:138-179 B:138-179 A:222-262 B:222-262 A:180-221 B:180-221

Biological Unit 1 (1, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NHL	PS51125	NHL repeat profile.	PKND_MYCTO	414-456 498-539 461-497 540-581 624-664 582-623	6	- B:12-52 - B:96-137 - B:59-95 - B:138-179 - B:222-262 - B:180-221
1	NHL	PS51125	NHL repeat profile.	PKND_MYCTU	414-456 498-539 461-497 540-581 624-664 582-623	6	- B:12-52 - B:96-137 - B:59-95 - B:138-179 - B:222-262 - B:180-221

Biological Unit 2 (1, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	NHL	PS51125	NHL repeat profile.	PKND_MYCTO	414-456 498-539 461-497 540-581 624-664 582-623	6	A:12-52 - A:96-137 - A:59-95 - A:138-179 - A:222-262 - A:180-221 -
1	NHL	PS51125	NHL repeat profile.	PKND_MYCTU	414-456 498-539 461-497 540-581 624-664 582-623	6	A:12-52 - A:96-137 - A:59-95 - A:138-179 - A:222-262 - A:180-221 -

(no "Exon" information available for 1RWI)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:256
 aligned with PKND_MYCTO | P9WI78 from UniProtKB/Swiss-Prot  Length:664

    Alignment length:260
                                                                                                                                                                                                                                                                                     664        
                                   422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662 |       -
           PKND_MYCTO   413 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS--------   -
               SCOP domains d1rwia_ A: Serine/threonine-protein kinase     PknD                                                                                                                                                                                                                  SCOP domains
               CATH domains 1rwiA00 A:11-270 TolB, C-terminal domain                                                                                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee...........eeeeee.....eeeee.....eeeee.----..ee...........eee.....eeeee...eeeee.......ee........eeeeee.....eeeee.hhheeeee.......ee............ee.....eeeeehhhheeeee......eee........eeeeee.....eeeee.....eeee.......ee............ee.....eeeeehhhheeeee..hhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -NHL  PDB: A:12-52 UniProt: 414-456         ----NHL  PDB: A:59-95 UniProt: 461-497   NHL  PDB: A:96-137 UniProt: 498-539       NHL  PDB: A:138-179 UniProt: 540-581      NHL  PDB: A:180-221 UniProt: 582-623      NHL  PDB: A:222-262 UniProt: 624-664     -------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rwi A  11 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA----GTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHHH 270
                                    20        30        40        50 |    | 60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
                                                                    52   57

Chain A from PDB  Type:PROTEIN  Length:256
 aligned with PKND_MYCTU | P9WI79 from UniProtKB/Swiss-Prot  Length:664

    Alignment length:260
                                                                                                                                                                                                                                                                                     664        
                                   422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662 |       -
           PKND_MYCTU   413 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS--------   -
               SCOP domains d1rwia_ A: Serine/threonine-protein kinase     PknD                                                                                                                                                                                                                  SCOP domains
               CATH domains 1rwiA00 A:11-270 TolB, C-terminal domain                                                                                                                                                                                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee...........eeeeee.....eeeee.....eeeee.----..ee...........eee.....eeeee...eeeee.......ee........eeeeee.....eeeee.hhheeeee.......ee............ee.....eeeeehhhheeeee......eee........eeeeee.....eeeee.....eeee.......ee............ee.....eeeeehhhheeeee..hhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) -NHL  PDB: A:12-52 UniProt: 414-456         ----NHL  PDB: A:59-95 UniProt: 461-497   NHL  PDB: A:96-137 UniProt: 498-539       NHL  PDB: A:138-179 UniProt: 540-581      NHL  PDB: A:180-221 UniProt: 582-623      NHL  PDB: A:222-262 UniProt: 624-664     -------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rwi A  11 GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA----GTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHHH 270
                                    20        30        40        50 |    | 60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
                                                                    52   57

Chain B from PDB  Type:PROTEIN  Length:254
 aligned with PKND_MYCTO | P9WI78 from UniProtKB/Swiss-Prot  Length:664

    Alignment length:259
                                                                                                                                                                                                                                                                                    664        
                                   423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663|        
           PKND_MYCTO   414 QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS--------   -
               SCOP domains d1rwib_ B: Serine/threonine-protein kinas     e PknD                                                                                                                                                                                                                SCOP domains
               CATH domains 1rwiB00 B:12-270 TolB, C-terminal domain                                                                                                                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...........eeeeee.....eeeee.....eeeee.-----.ee...........eee.....eeeee...eeeee.......ee........eeeeee.....eeeee.hhheeeee.......ee...........eee.....eeeeehhhheeeee......eee........eeeeee.....eeeee.....eeee.......ee............ee.....eeeeehhhheeeee..hhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE NHL  PDB: B:12-52 UniProt: 414-456         ----NHL  PDB: B:59-95 UniProt: 461-497   NHL  PDB: B:96-137 UniProt: 498-539       NHL  PDB: B:138-179 UniProt: 540-581      NHL  PDB: B:180-221 UniProt: 582-623      NHL  PDB: B:222-262 UniProt: 624-664     -------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rwi B  12 QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA-----TTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHHH 270
                                    21        31        41        51|     | 61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261         
                                                                   52    58

Chain B from PDB  Type:PROTEIN  Length:254
 aligned with PKND_MYCTU | P9WI79 from UniProtKB/Swiss-Prot  Length:664

    Alignment length:259
                                                                                                                                                                                                                                                                                    664        
                                   423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663|        
           PKND_MYCTU   414 QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS--------   -
               SCOP domains d1rwib_ B: Serine/threonine-protein kinas     e PknD                                                                                                                                                                                                                SCOP domains
               CATH domains 1rwiB00 B:12-270 TolB, C-terminal domain                                                                                                                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee...........eeeeee.....eeeee.....eeeee.-----.ee...........eee.....eeeee...eeeee.......ee........eeeeee.....eeeee.hhheeeee.......ee...........eee.....eeeeehhhheeeee......eee........eeeeee.....eeeee.....eeee.......ee............ee.....eeeeehhhheeeee..hhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) NHL  PDB: B:12-52 UniProt: 414-456         ----NHL  PDB: B:59-95 UniProt: 461-497   NHL  PDB: B:96-137 UniProt: 498-539       NHL  PDB: B:138-179 UniProt: 540-581      NHL  PDB: B:180-221 UniProt: 582-623      NHL  PDB: B:222-262 UniProt: 624-664     -------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rwi B  12 QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA-----TTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHHH 270
                                    21        31        41        51|     | 61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261         
                                                                   52    58

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: 6-bladed beta-propeller (327)

Superfamily: NHL repeat (3)

Family: NHL repeat (3)

Protein domain: Serine/threonine-protein kinase PknD (2)

Mycobacterium tuberculosis [TaxId: 1773] (2)

1a	d1rwia_	A:
1b	d1rwib_	B:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: 6 Propellor (215)

Topology: Neuraminidase (215)

Homologous Superfamily: TolB, C-terminal domain (42)

Mycobacterium tuberculosis. Organism_taxid: 1773. (2)

1a	1rwiA00	A:11-270
1b	1rwiB00	B:12-270

(no "Pfam Domain" information available for 1RWI)

Asymmetric Unit(hide GO term definitions)

Chain A,B (PKND_MYCTU | P9WI79)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0030145	manganese ion binding	Interacting selectively and non-covalently with manganese (Mn) ions.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0016036	cellular response to phosphate starvation	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
	GO:0043086	negative regulation of catalytic activity	Any process that stops or reduces the activity of an enzyme.
	GO:0045717	negative regulation of fatty acid biosynthetic process	Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.
	GO:0032091	negative regulation of protein binding	Any process that stops, prevents, or reduces the frequency, rate or extent of protein binding.
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0043085	positive regulation of catalytic activity	Any process that activates or increases the activity of an enzyme.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
cellular component
	GO:0005618	cell wall	The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0005887	integral component of plasma membrane	The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain A,B (PKND_MYCTO | P9WI78)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Asymmetric Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1rwi)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

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	1rwi
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
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	PKND_MYCTO \| P9WI78
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		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	PKND_MYCTU \| P9WI79
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

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	2.7.1.37
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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		Disease Information	:	OMIM

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		Interatomic Contacts of Structural Units	:	CSU
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	PKND_MYCTO \| P9WI78
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	PKND_MYCTU \| P9WI79
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	PKND_MYCTO \| P9WI78	:	1rwl
	PKND_MYCTU \| P9WI79	:	1rwl

1rwl	EXTRACELLULAR DOMAIN OF MYCOBACTERIUM TUBERCULOSIS PKND RELATED ID: RV0931C RELATED DB: TARGETDB

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 14)

Sites (14, 14)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 12)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 2)

Pfam Domains (0, 0)

Gene Ontology (23, 35)

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File