Chain A from PDB Type:PROTEIN Length:259
aligned with MENB_MYCTO | P9WNP4 from UniProtKB/Swiss-Prot Length:314
Alignment length:280
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296
MENB_MYCTO 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGR 296
SCOP domains d1rjna_ A: Naphthoate synthase MenB SCOP domains
CATH domains 1rjnA01 A:17-251 2-enoyl-CoA Hydratase; Chain A, domain 1 --------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee.....---------------------.....hhhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjn A 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQ---------------------ARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGR 296
26 36 46 56 66 76 86 96 106| - - | 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296
107 129
Chain A from PDB Type:PROTEIN Length:259
aligned with MENB_MYCTU | P9WNP5 from UniProtKB/Swiss-Prot Length:314
Alignment length:280
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296
MENB_MYCTU 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGR 296
SCOP domains d1rjna_ A: Naphthoate synthase MenB SCOP domains
CATH domains 1rjnA01 A:17-251 2-enoyl-CoA Hydratase; Chain A, domain 1 --------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee.....---------------------.....hhhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.hhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjn A 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQ---------------------ARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGR 296
26 36 46 56 66 76 86 96 106| - - | 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276 286 296
107 129
Chain B from PDB Type:PROTEIN Length:275
aligned with MENB_MYCTO | P9WNP4 from UniProtKB/Swiss-Prot Length:314
Alignment length:301
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313
MENB_MYCTO 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPRYF 314
SCOP domains d1rjnb_ B: Naphthoate synthase MenB SCOP domains
CATH domains -------1rjnB01 B:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 1rjnB02 B:252-302 ------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee......--------------------------hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee..hhhhh.......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjn B 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQR--------------------------HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPRYF 314
23 33 43 53 63 73 83 93 103 | - - - | 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313
108 135
Chain B from PDB Type:PROTEIN Length:275
aligned with MENB_MYCTU | P9WNP5 from UniProtKB/Swiss-Prot Length:314
Alignment length:301
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313
MENB_MYCTU 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPRYF 314
SCOP domains d1rjnb_ B: Naphthoate synthase MenB SCOP domains
CATH domains -------1rjnB01 B:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 1rjnB02 B:252-302 ------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee......--------------------------hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee..hhhhh.......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjn B 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQR--------------------------HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSPFPRYF 314
23 33 43 53 63 73 83 93 103 | - - - | 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313
108 135
Chain C from PDB Type:PROTEIN Length:245
aligned with MENB_MYCTO | P9WNP4 from UniProtKB/Swiss-Prot Length:314
Alignment length:272
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283
MENB_MYCTO 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
SCOP domains d1rjnc_ C: Naphthoate synthase MenB SCOP domains
CATH domains -------1rjnC01 C:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 ---------------------------------- CATH domains
Pfam domains (1) --------------------------ECH-1rjnC01 C:40-285 Pfam domains (1)
Pfam domains (2) --------------------------ECH-1rjnC02 C:40-285 Pfam domains (2)
Pfam domains (3) --------------------------ECH-1rjnC03 C:40-285 Pfam domains (3)
Sec.struct. author hhhhh..hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee....---------------------------.hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhh........hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjn C 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD---------------------------LHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
23 33 43 53 63 73 83 93 103 | - - -| 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283
106 134
Chain C from PDB Type:PROTEIN Length:245
aligned with MENB_MYCTU | P9WNP5 from UniProtKB/Swiss-Prot Length:314
Alignment length:272
23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283
MENB_MYCTU 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
SCOP domains d1rjnc_ C: Naphthoate synthase MenB SCOP domains
CATH domains -------1rjnC01 C:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 ---------------------------------- CATH domains
Pfam domains (1) --------------------------ECH-1rjnC01 C:40-285 Pfam domains (1)
Pfam domains (2) --------------------------ECH-1rjnC02 C:40-285 Pfam domains (2)
Pfam domains (3) --------------------------ECH-1rjnC03 C:40-285 Pfam domains (3)
Sec.struct. author hhhhh..hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee....---------------------------.hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhh........hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjn C 14 ALSDNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD---------------------------LHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
23 33 43 53 63 73 83 93 103 | - - -| 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283
106 134
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |