Chain A from PDB Type:PROTEIN Length:239
aligned with MENB_MYCTO | P9WNP4 from UniProtKB/Swiss-Prot Length:314
Alignment length:268
27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277
MENB_MYCTO 18 NPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
SCOP domains d1rjma_ A: Naphthoate synthase MenB SCOP domains
CATH domains ---1rjmA01 A:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 ---------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee..........eee...-----------------------------hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhhh...eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjm A 18 NPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGG-----------------------------HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
27 37 47 57 67 77 87 97 | - - - 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277
105 135
Chain A from PDB Type:PROTEIN Length:239
aligned with MENB_MYCTU | P9WNP5 from UniProtKB/Swiss-Prot Length:314
Alignment length:268
27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277
MENB_MYCTU 18 NPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
SCOP domains d1rjma_ A: Naphthoate synthase MenB SCOP domains
CATH domains ---1rjmA01 A:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 ---------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee..........eee...-----------------------------hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhhh...eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjm A 18 NPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGG-----------------------------HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
27 37 47 57 67 77 87 97 | - - - 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277
105 135
Chain B from PDB Type:PROTEIN Length:240
aligned with MENB_MYCTO | P9WNP4 from UniProtKB/Swiss-Prot Length:314
Alignment length:269
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
MENB_MYCTO 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
SCOP domains d1rjmb_ B: Naphthoate synthase MenB SCOP domains
CATH domains ----1rjmB01 B:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 ---------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee...-----------------------------hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh.eeehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjm B 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGG-----------------------------HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
26 36 46 56 66 76 86 96 |- - - 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
105 135
Chain B from PDB Type:PROTEIN Length:240
aligned with MENB_MYCTU | P9WNP5 from UniProtKB/Swiss-Prot Length:314
Alignment length:269
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
MENB_MYCTU 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
SCOP domains d1rjmb_ B: Naphthoate synthase MenB SCOP domains
CATH domains ----1rjmB01 B:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 ---------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee...-----------------------------hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.hhhhhh.......hhhhhhhhhhhhhhhhhhhh.eeehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjm B 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGG-----------------------------HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATRL 285
26 36 46 56 66 76 86 96 |- - - 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
105 135
Chain C from PDB Type:PROTEIN Length:238
aligned with MENB_MYCTO | P9WNP4 from UniProtKB/Swiss-Prot Length:314
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
MENB_MYCTO 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATR 284
SCOP domains d1rjmc_ C: Naphthoate synthase MenB SCOP domains
CATH domains ----1rjmC01 C:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 --------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee....---------------------------.hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.....---......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjm C 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD---------------------------LHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDAD---FDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATR 284
26 36 46 56 66 76 86 96 106 - - 136 146 156 166 176 186| | 196 206 216 226 236 246 256 266 276
106 134 187 191
Chain C from PDB Type:PROTEIN Length:238
aligned with MENB_MYCTU | P9WNP5 from UniProtKB/Swiss-Prot Length:314
Alignment length:268
26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246 256 266 276
MENB_MYCTU 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATR 284
SCOP domains d1rjmc_ C: Naphthoate synthase MenB SCOP domains
CATH domains ----1rjmC01 C:21-251 2-enoyl-CoA Hydratase; Chain A, domain 1 --------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhh.eee.........eeeeee....eeeeee.hhhhh...hhhhhhhhhhhhhhhhh.....eeeeee..........eee....---------------------------.hhhhhhhhhhhh..eeeeee..eeehhhhhhhhhh.eeeee....eee.....---......hhhhhhhhhhhhhhhhhhhh.eehhhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1rjm C 17 DNPFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD---------------------------LHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDAD---FDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLVGQQLFAGEATR 284
26 36 46 56 66 76 86 96 106 - - 136 146 156 166 176 186| | 196 206 216 226 236 246 256 266 276
106 134 187 191
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |