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(-) Description

Title :  CRYSTAL STRUCTURE OF 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE FROM ZYMOMONAS MOBILIS
 
Authors :  S. Ricagno, S. Grolle, S. Bringer-Meyer, H. Sahm, Y. Lindqvist, G. Schneider
Date :  22 Sep 03  (Deposition) - 13 Jul 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.91
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Reductoisomerase, Nadph Dependent, Fosmidomycin, Non- Mevalonate Pathway, Zymomonas Mobilis, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Ricagno, S. Grolle, S. Bringer-Meyer, H. Sahm, Y. Lindqvist, G. Schneider
Crystal Structure Of 1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase From Zymomonas Mobilis At 1. 9-A Resolution.
Biochim. Biophys. Acta V. 1698 37 2004
PubMed-ID: 15063313  |  Reference-DOI: 10.1016/J.BBAPAP.2003.10.006
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE
    Chains: A, B, C, D
    EC Number: 1.1.1.267
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE30
    Expression System Strain: M15 [PREP4]
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: DXR
    Organism Scientific: ZYMOMONAS MOBILIS
    Organism Taxid: 542
    Synonym: DXP REDUCTOISOMERASE, 1-DEOXYXYLULOSE-5-PHOSPHATE REDUCTOISOMERASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1ACT4Ligand/IonACETATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:13 , ASN A:39 , ARG A:40 , ASN A:41 , HOH A:1356 , HOH A:1493BINDING SITE FOR RESIDUE ACT A 1301
2AC2SOFTWARETHR B:13 , ALA B:38 , ASN B:39 , ARG B:40 , ASN B:41BINDING SITE FOR RESIDUE ACT B 1302
3AC3SOFTWARETHR C:13 , ASN C:39 , ARG C:40 , ASN C:41BINDING SITE FOR RESIDUE ACT C 1303
4AC4SOFTWARETHR D:13 , ASN D:39 , ARG D:40 , ASN D:41 , HOH D:1306 , HOH D:1544BINDING SITE FOR RESIDUE ACT D 1304

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1R0K)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Trp A:276 -Pro A:277
2Trp B:276 -Pro B:277
3Trp C:276 -Pro C:277
4Gln D:3 -Pro D:4
5Trp D:276 -Pro D:277

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1R0K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1R0K)

(-) Exons   (0, 0)

(no "Exon" information available for 1R0K)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:380
 aligned with DXR_ZYMMO | Q9X5F2 from UniProtKB/Swiss-Prot  Length:388

    Alignment length:386
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381      
            DXR_ZYMMO     2 SQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAYHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMESLP 387
               SCOP domains -d1r0ka2 A:3-126,A:265-290 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                   d1r0ka3 A:127-264 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                                         d1r0ka2 A:3-126,A:265-290 d1r0ka1 A:291-385 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain           -- SCOP domains
               CATH domains 1r0kA01 A:2-150 NAD(P)-binding Rossmann-like Domain                                                                                                  --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee...hhhhhhhhhhhhhh...eeeeeeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhh.....eeeehhhhhhhhhh....eeee...hhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh.eeee.hhhhhhhhhhh...hhh.eeeeeeee........hhhhhh..hhhhhhh------hhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh...........hhhhhheee........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r0k A   2 SQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQ------GAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMESLP 387
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191      |  -   |   211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381      
                                                                                                                                                                                                                              198    205                                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:382
 aligned with DXR_ZYMMO | Q9X5F2 from UniProtKB/Swiss-Prot  Length:388

    Alignment length:384
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382    
            DXR_ZYMMO     3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAYHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMESL 386
               SCOP domains d1r0kb2 B:3-126,B:265-290 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                   d1r0kb3 B:127-264 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                                         d1r0kb2 B:3-126,B:265-290 d1r0kb1 B:291-385 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain           - SCOP domains
               CATH domains 1r0kB01 B:3-150 NAD(P)-binding Rossmann-like Domain                                                                                                 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhh....eeeeeeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhhh....eeeehhhhhhhhhh....eeee...hhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh.eeee.hhhhhhhhhhh...hhh.eeeeeeee........hhhhhh..hhhhhh...--..hhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh...........hhhhhheee.........hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1r0k B   3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHP--SMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMESL 386
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       | -|      212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382    
                                                                                                                                                                                                                               200  |                                                                                                                                                                                       
                                                                                                                                                                                                                                  203                                                                                                                                                                                       


Chain C from PDB  Type:PROTEIN  Length:379
 aligned with DXR_ZYMMO | Q9X5F2 from UniProtKB/Swiss-Prot  Length:388

    Alignment length:386
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382      
            DXR_ZYMMO     3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAYHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMESLPA 388
               SCOP domains d1r0kc2 C:3-126,C:265-290 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                   d1r0kc3 C:127-264 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                                         d1r0kc2 C:3-126,C:265-290 d1r0kc1 C:291-385 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain           --- SCOP domains
               CATH domains 1r0kC01 C:3-150 NAD(P)-binding Rossmann-like Domain                                                                                                 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhh...eeeeeeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhh.....eeeehhhhhhhhhh....eeee...hhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh.eeee.hhhhhhhhhhh...hhh.eeeeeeee........hhhhhh..hhhhhh-------hhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh...........hhhhhheee.........hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r0k C   3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAV-------GAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMESLPA 388
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192    |    -  |    212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382      
                                                                                                                                                                                                                            197     205                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:380
 aligned with DXR_ZYMMO | Q9X5F2 from UniProtKB/Swiss-Prot  Length:388

    Alignment length:383
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382   
            DXR_ZYMMO     3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAYHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMES 385
               SCOP domains d1r0kd2 D:3-126,D:265-290 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                   d1r0kd3 D:127-264 1-deoxy-D-xylulose-5-phosphate reductoisomerase                                                                         d1r0kd2 D:3-126,D:265-290 d1r0kd1 D:291-385 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain            SCOP domains
               CATH domains 1r0kD01 D:3-150 NAD(P)-binding Rossmann-like Domain                                                                                                 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----DXP_reductoisom-1r0kD05 D:7-132                                                                                               -------------DXP_redisom_C-1r0kD01 D:146-229                                                     -------------------------------DXPR_C-1r0kD09 D:261-379                                                                                               ------ Pfam domains (1)
           Pfam domains (2) ----DXP_reductoisom-1r0kD06 D:7-132                                                                                               -------------DXP_redisom_C-1r0kD02 D:146-229                                                     -------------------------------DXPR_C-1r0kD10 D:261-379                                                                                               ------ Pfam domains (2)
           Pfam domains (3) ----DXP_reductoisom-1r0kD07 D:7-132                                                                                               -------------DXP_redisom_C-1r0kD03 D:146-229                                                     -------------------------------DXPR_C-1r0kD11 D:261-379                                                                                               ------ Pfam domains (3)
           Pfam domains (4) ----DXP_reductoisom-1r0kD08 D:7-132                                                                                               -------------DXP_redisom_C-1r0kD04 D:146-229                                                     -------------------------------DXPR_C-1r0kD12 D:261-379                                                                                               ------ Pfam domains (4)
         Sec.struct. author ..eeeeee...hhhhhhhhhhhhhh...eeeeeeee..hhhhhhhhhhhh...eeee.hhhhhhhhhhhh.....eeeehhhhhhhhhh....eeee...hhhhhhhhhhhhhh..eeee..hhhhhhhhhhhhhhhhhhh.eeee.hhhhhhhhhhh...hhh.eeeeeeee........hhhhhh..hhhhhh...---.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee.....eeeeeee....eeeee....hhhhhhhhhhh...........hhhhhheee........hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1r0k D   3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHP---MGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQIGSPDMRTPIGHTLAWPKRMETPAESLDFTKLRQMDFEAPDYERFPALTLAMESIKSGGARPAVMNAANEIAVAAFLDKKIGFLDIAKIVEKTLDHYTPATPSSLEDVFAIDNEARIQAAALMES 385
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       | - |     212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382   
                                                                                                                                                                                                                               200 204
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 12)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 4)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (3, 12)

Asymmetric Unit
(-)
Clan: NADP_Rossmann (1239)
(-)
Clan: no clan defined [family: DXPR_C] (19)
(-)
Family: DXPR_C (19)
(-)
Zymomonas mobilis (2)
3aDXPR_C-1r0kD09D:261-379
3bDXPR_C-1r0kD10D:261-379
3cDXPR_C-1r0kD11D:261-379
3dDXPR_C-1r0kD12D:261-379

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (DXR_ZYMMO | Q9X5F2)
molecular function
    GO:0030604    1-deoxy-D-xylulose-5-phosphate reductoisomerase activity    Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + NADP(+) = 1-deoxy-D-xylulose 5-phosphate + H(+) + NADPH.
    GO:0070402    NADPH binding    Interacting selectively and non-covalently with the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0019288    isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway    The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.
    GO:0008299    isoprenoid biosynthetic process    The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0016114    terpenoid biosynthetic process    The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.

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  1r0k
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  DXR_ZYMMO | Q9X5F2
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  1.1.1.267
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  DXR_ZYMMO | Q9X5F2
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        DXR_ZYMMO | Q9X5F2: 1r0l

(-) Related Entries Specified in the PDB File

1r0l SAME PROTEIN IN COMPLEX WITH NADPH