Chain A from PDB Type:PROTEIN Length:164
aligned with PCRA_GEOSE | P56255 from UniProtKB/Swiss-Prot Length:724
Alignment length:164
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
PCRA_GEOSE 1 MNFLSEQLLAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKR 164
SCOP domains d1qhh.1 A:,B:,C:,D: DEXX box DNA helicase SCOP domains
CATH domains 1qhhA00 A:1-164 P-loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhh....hhhhhhhh...............hhhhhhhhhhhhhh.....hhh.eeee..hhhhhhhhhhhhhhhhhhhhh.eeeehhhhhhhhhhhhhhhh............hhhhhhhhhhh..........hhhhhhhhhhhhhh...hhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------UVRD_HELICASE_ATP_BIND PDB: A:10-164 UniProt: 10-289 PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1qhh A 1 MNFLSEQLLAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKR 164
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160
Chain B from PDB Type:PROTEIN Length:261
aligned with PCRA_GEOSE | P56255 from UniProtKB/Swiss-Prot Length:724
Alignment length:261
177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427
PCRA_GEOSE 168 YYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKRGIGASTID 428
SCOP domains d1qhh.1 A:,B:,C:,D: DEXX box DNA helicase SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) UvrD-helicase-1qhhB01 B:168-275 --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
Pfam domains (2) UvrD-helicase-1qhhB02 B:168-275 --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
Sec.struct. author ..hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhh.hhhhhhhhhh...eee..hhh..hhhhhhhhhhh.....eee...hhh...hhh...hhhhhhhhhh................hhhhhhhhhhhhh..........................hhhhhhhhhhhhhhhh......hhh.......hhhhhhhhhhhhh............hhh.hhhhhhhhhhhhhh....hhhhhhh.............. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE UVRD_HELICASE_ATP_BIND PDB: - UniProt: 10-289 UVRD_HELICASE_CTER PDB: B:290-428 UniProt: 290-569 PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1qhh B 168 YYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNRKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKRGIGASTID 428
177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387 397 407 417 427
Chain C from PDB Type:PROTEIN Length:102
aligned with PCRA_GEOSE | P56255 from UniProtKB/Swiss-Prot Length:724
Alignment length:102
450 460 470 480 490 500 510 520 530 540
PCRA_GEOSE 441 LFEALGELEMIGLGAKAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLALIS 542
SCOP domains d1qhh.1 A:,B:,C:,D: DEXX box DNA helicase SCOP domains
CATH domains 1qhhC00 C:441-542 PCRA; domain 4 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhh.hhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh..hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE UVRD_HELICASE_CTER PDB: - UniProt: 290-569 PROSITE
Transcript ------------------------------------------------------------------------------------------------------ Transcript
1qhh C 441 LFEALGELEMIGLGAKAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLALIS 542
450 460 470 480 490 500 510 520 530 540
Chain D from PDB Type:PROTEIN Length:96
aligned with PCRA_GEOSE | P56255 from UniProtKB/Swiss-Prot Length:724
Alignment length:96
565 575 585 595 605 615 625 635 645
PCRA_GEOSE 556 GDAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERRLAYVGITRAEEELVLTSAQMRTLFGNIQMDPPSRFLNEIPAHLLETASR 651
SCOP domains d1qhh.1 A:,B:,C:,D: DEXX box DNA helicase SCOP domains
CATH domains ------------------------------------------------------------------------------------------------ CATH domains
Pfam domains (1) UvrD_C-1qhhD01 D:556-622 ----------------------------- Pfam domains (1)
Pfam domains (2) UvrD_C-1qhhD02 D:556-622 ----------------------------- Pfam domains (2)
Pfam domains (3) UvrD_C-1qhhD03 D:556-622 ----------------------------- Pfam domains (3)
Sec.struct. author ........hhhh......eeee..........hhhhh.hhhhhhhhhhhhhhhhh...eeee.....eee..eee.....hhhh...hhh...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE UVRD_HELICASE_---------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------ Transcript
1qhh D 556 GDAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERRLAYVGITRAEEELVLTSAQMRTLFGNIQMDPPSRFLNEIPAHLLETASR 651
565 575 585 595 605 615 625 635 645
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |