Chain A from PDB Type:PROTEIN Length:311
aligned with PAPA3_CARPA | P10056 from UniProtKB/Swiss-Prot Length:348
Alignment length:311
47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347
PAPA3_CARPA 38 LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 348
SCOP domains d1pcia_ A: Caricain (protease omega) SCOP domains
CATH domains 1pciA00 A:12P-216 Cysteine proteinases CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhh................................................hhhhhhhhhhhhhhhhhh.......hhhhhh......hhh...hhhhhhhhhhh...............................eee.....hhhhhhhhhh..eeeee....hhhhheeee...........eeeeeeeeeee..eeeeeee...........eeeee........hhhhhh..eee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------THIOL_PROTEA------------------------------------------------------------------------------------------------------------------------------THIOL_PROTE------THIOL_PROTEASE_ASN ----------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pci A 12P LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216
|||||||21P|||||||31P|||||||41P|||||||51P|||||||61P|||||||71P|||||||81P|||||||91P||||||101P|||||| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215
||||||20P||||||29P||||||38P||||||47P||||||56P||||||65P||||||74P||||||83P||||||92P|||||101P||||||
12P||||||21P||||||30P||||||39P||||||48P||||||57P||||||66P||||||75P||||||84P||||||93P|||||102P|||||
13P||||||22P||||||31P||||||40P||||||49P||||||58P||||||67P||||||76P||||||85P||||||94P|||||103P||||
14P||||| 23P||||| 32P||||| 41P||||| 50P||||| 59P||||| 68P||||| 77P||||| 86P||||| 95P|||||104P|||
15P|||| 24P|||| 33P|||| 42P|||| 51P|||| 60P|||| 69P|||| 78P|||| 87P|||| 96P|||| 105P||
16P||| 25P||| 34P||| 43P||| 52P||| 61P||| 70P||| 79P||| 88P||| 97P||| 106P|
17P|| 26P|| 35P|| 44P|| 53P|| 62P|| 71P|| 80P|| 89P|| 98P|| 1
18P| 27P| 36P| 45P| 54P| 63P| 72P| 81P| 90P| 99P|
19P 28P 37P 46P 55P 64P 73P 82P 91P 100P
Chain B from PDB Type:PROTEIN Length:311
aligned with PAPA3_CARPA | P10056 from UniProtKB/Swiss-Prot Length:348
Alignment length:311
47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347
PAPA3_CARPA 38 LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 348
SCOP domains d1pcib_ B: Caricain (protease omega) SCOP domains
CATH domains 1pciB00 B:12P-216 Cysteine proteinases CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhh................................................hhhhhhhhhhhhhhhhhh.......hhhhhh......hhh...hhhhhhhhhhh...............................eee.....hhhhhhhhhh..eeeee....hhhhheeee...........eeeeeeeeeee..eeeeeee...........eeeee........hhhhhh..eee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------THIOL_PROTEA------------------------------------------------------------------------------------------------------------------------------THIOL_PROTE------THIOL_PROTEASE_ASN ----------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pci B 12P LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216
|||||||21P|||||||31P|||||||41P|||||||51P|||||||61P|||||||71P|||||||81P|||||||91P||||||101P|||||| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215
12P||||||21P||||||30P||||||39P||||||48P||||||57P||||||66P||||||75P||||||84P||||||93P|||||102P|||||
13P||||||22P||||||31P||||||40P||||||49P||||||58P||||||67P||||||76P||||||85P||||||94P|||||103P||||
14P||||||23P||||||32P||||||41P||||||50P||||||59P||||||68P||||||77P||||||86P||||||95P|||||104P|||
15P||||| 24P||||| 33P||||| 42P||||| 51P||||| 60P||||| 69P||||| 78P||||| 87P||||| 96P|||||105P||
16P|||| 25P|||| 34P|||| 43P|||| 52P|||| 61P|||| 70P|||| 79P|||| 88P|||| 97P|||| 106P|
17P||| 26P||| 35P||| 44P||| 53P||| 62P||| 71P||| 80P||| 89P||| 98P||| 1
18P|| 27P|| 36P|| 45P|| 54P|| 63P|| 72P|| 81P|| 90P|| 99P||
19P| 28P| 37P| 46P| 55P| 64P| 73P| 82P| 91P| 100P|
20P 29P 38P 47P 56P 65P 74P 83P 92P 101P
Chain C from PDB Type:PROTEIN Length:311
aligned with PAPA3_CARPA | P10056 from UniProtKB/Swiss-Prot Length:348
Alignment length:311
47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347
PAPA3_CARPA 38 LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 348
SCOP domains d1pcic_ C: Caricain (protease omega) SCOP domains
CATH domains 1pciC00 C:12P-216 Cysteine proteinases CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.....eee.........hhhhhhhh................................................hhhhhhhhhhhhhhhhhh.......hhhhhh......hhh...hhhhhhhhhhh...............................eee.....hhhhhhhhhh..eeeee....hhhhheeee...........eeeeeeeeeee..eeeeeee...........eeeee........hhhhhh..eee... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------THIOL_PROTEA------------------------------------------------------------------------------------------------------------------------------THIOL_PROTE------THIOL_PROTEASE_ASN ----------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pci C 12P LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216
|||||||21P|||||||31P|||||||41P|||||||51P|||||||61P|||||||71P|||||||81P|||||||91P||||||101P|||||| 5 15 25 35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215
12P||||||21P||||||30P||||||39P||||||48P||||||57P||||||66P||||||75P||||||84P||||||93P|||||102P|||||
13P||||||22P||||||31P||||||40P||||||49P||||||58P||||||67P||||||76P||||||85P||||||94P|||||103P||||
14P||||||23P||||||32P||||||41P||||||50P||||||59P||||||68P||||||77P||||||86P||||||95P|||||104P|||
15P||||| 24P||||| 33P||||| 42P||||| 51P||||| 60P||||| 69P||||| 78P||||| 87P||||| 96P|||||105P||
16P|||| 25P|||| 34P|||| 43P|||| 52P|||| 61P|||| 70P|||| 79P|||| 88P|||| 97P|||| 106P|
17P||| 26P||| 35P||| 44P||| 53P||| 62P||| 71P||| 80P||| 89P||| 98P||| 1
18P|| 27P|| 36P|| 45P|| 54P|| 63P|| 72P|| 81P|| 90P|| 99P||
19P| 28P| 37P| 46P| 55P| 64P| 73P| 82P| 91P| 100P|
20P 29P 38P 47P 56P 65P 74P 83P 92P 101P
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |