Chain H from PDB Type:PROTEIN Length:122
aligned with HVM07_MOUSE | P01751 from UniProtKB/Swiss-Prot Length:139
Alignment length:122
139
29 39 49 59 69 79 89 99 109 119 129 139
HVM07_MOUSE 20 QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTLTVSS-- -
SCOP domains d1oaxh_ H: Immunoglobulin heavy chain variable domain, VH SCOP domains
CATH domains 1oaxH00 H:1-122 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeeee.....eeeee...eeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
1oax H 1 EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNLKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSSAA 122
10 20 30 40 50 60 70 80 90 100 110 120
Chain J from PDB Type:PROTEIN Length:122
aligned with HVM07_MOUSE | P01751 from UniProtKB/Swiss-Prot Length:139
Alignment length:122
139
29 39 49 59 69 79 89 99 109 119 129 139
HVM07_MOUSE 20 QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTLTVSS-- -
SCOP domains d1oaxj_ J: Immunoglobulin heavy chain variable domain, VH SCOP domains
CATH domains 1oaxJ00 J:1-122 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeeee.....eeeee...eeeee.... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
1oax J 1 EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNLKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSSAA 122
10 20 30 40 50 60 70 80 90 100 110 120
Chain L from PDB Type:PROTEIN Length:108
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:108
30 40 50 60 70 80 90 100 110 120
LV1B_MOUSE 21 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaxl_ L: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oaxL00 L:2-109 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeee....eee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1oax L 2 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPRHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVL 109
11 21 31 41 51 61 71 81 91 101
Chain M from PDB Type:PROTEIN Length:108
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:108
30 40 50 60 70 80 90 100 110 120
LV1B_MOUSE 21 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaxm_ M: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oaxM00 M:2-109 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .......eeee....ee..ee.............eeeeee...eeeeeee...ee.......eeeee....eeeeee..hhhhh.eeeeeee....eee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1oax M 2 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPRHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVL 109
11 21 31 41 51 61 71 81 91 101
Chain N from PDB Type:PROTEIN Length:108
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:108
30 40 50 60 70 80 90 100 110 120
LV1B_MOUSE 21 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaxn_ N: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oaxN00 N:2-109 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeee....eee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1oax N 2 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPRHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVL 109
11 21 31 41 51 61 71 81 91 101
Chain O from PDB Type:PROTEIN Length:107
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:108
30 40 50 60 70 80 90 100 110 120
LV1B_MOUSE 21 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaxo_ O: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oaxO00 O:2-109 Immunoglo bulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..ee...eeee....eeeeeeee..-........eeeeee...eeeeeee...ee.......eeeee....eeeeee..hhhhh.eeeeeee....eee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1oax O 2 AVVTQESALTTSPGETVTLTCRSST-AVTTSNYANWVQEKPRHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVL 109
11 21 | | 31 41 51 61 71 81 91 101
26 |
28
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |