Chain H from PDB Type:PROTEIN Length:123
aligned with HVM07_MOUSE | P01751 from UniProtKB/Swiss-Prot Length:139
Alignment length:123
139
29 39 49 59 69 79 89 99 109 119 129 139
HVM07_MOUSE 20 QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTLTVSS--- -
SCOP domains d1oauh_ H: Immunoglobulin heavy chain variable domain, VH SCOP domains
CATH domains 1oauH00 H:1-122 Immunoglobulins - CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeeee....eeee.hhhh..eeeeee....eeeeee...hhhhheeeeeeeee.....eeeee...eeeee..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
1oau H 1 EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSSAAS 500
10 20 30 40 50 60 70 80 90 100 110 120 ||
122|
500
Chain I from PDB Type:PROTEIN Length:22
aligned with HVM07_MOUSE | P01751 from UniProtKB/Swiss-Prot Length:139
Alignment length:112
36 46 56 66 76 86 96 106 116 126 136
HVM07_MOUSE 27 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTLTVS 138
SCOP domains d1 oa u i_ I : Immun o g lo bu SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..--------..---------------.----..-------------------------------------.-.-----------.......-------.---.--..--.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
1oau I 8 GA--------VK---------------H----RP-------------------------------------A-M-----------VYYCARM-------F---G--TT--VS 119
| -|| - | - || - - - - | | - | 97 | 107 | || -|
9 18| 35 40| 79 | 93 99 107 111 || |
19 41 81 114| |
115 |
118
Chain J from PDB Type:PROTEIN Length:123
aligned with HVM07_MOUSE | P01751 from UniProtKB/Swiss-Prot Length:139
Alignment length:123
139
29 39 49 59 69 79 89 99 109 119 129 139
HVM07_MOUSE 20 QVQLQQPGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTLTVSS--- -
SCOP domains d1oauj_ J: Immunoglobulin heavy chain variable domain, VH SCOP domains
CATH domains 1oauJ00 J:1-122 Immunoglobulins - CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhheeeeeee.....eeeeeeee....eeee.hhhh..eeeeee....eeeeee...hhhhheeeeeeeee.....eeeee...eeeee..... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
1oau J 1 EVQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNGGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARMWYYGTYYFDYWGQGTTLTVSSAAS 500
10 20 30 40 50 60 70 80 90 100 110 120 ||
122|
500
Chain K from PDB Type:PROTEIN Length:22
aligned with HVM07_MOUSE | P01751 from UniProtKB/Swiss-Prot Length:139
Alignment length:113
36 46 56 66 76 86 96 106 116 126 136
HVM07_MOUSE 27 GAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTLTVSS 139
SCOP domains d1 oa uk _ K: Immu n og lo b u SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..--------..--------------------..-------------------------------------.-.-----------.......--------.-..--..--.-. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
1oau K 8 GA--------VK--------------------RP-------------------------------------A-M-----------VYYCARM--------D-WG--TT--V-S 120
| -|| - - || - - - - | | - | 97 | -| || || -| |
9 18| 40| 79 | 93 99 108 || || | |
19 41 81 110| || | |
111 || | |
114| | |
115 | |
118 |
120
Chain L from PDB Type:PROTEIN Length:108
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:108
30 40 50 60 70 80 90 100 110 120
LV1B_MOUSE 21 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaul_ L: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oauL00 L:2-109 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeee....eee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1oau L 2 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVL 109
11 21 31 41 51 61 71 81 91 101
Chain M from PDB Type:PROTEIN Length:90
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:104
34 44 54 64 74 84 94 104 114 124
LV1B_MOUSE 25 QESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaum_ M: Immunoglobulin light chain lambda v ariable domain, VL-lambda SCOP domains
CATH domains 1oauM00 M:6-109 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee....eeeeee.......hhhhh..eeeee...eeeeee-.-..........eeeeee..eeeeeee..hhhhheeee.------------.eeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1oau M 6 QESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLI-G-NNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFC------------GTKLTVL 109
15 25 35 45 | | 55 65 75 85 | - 105
50 | | 90 103
52 |
54
Chain N from PDB Type:PROTEIN Length:108
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:108
30 40 50 60 70 80 90 100 110 120
LV1B_MOUSE 21 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oaun_ N: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oauN00 N:2-109 Immunoglobulins CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eee..eeee....eeeeeeee.....hhhhh.eeeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeeeeeee....eee...eeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------ Transcript
1oau N 2 AVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHLVFGGGTKLTVL 109
11 21 31 41 51 61 71 81 91 101
Chain O from PDB Type:PROTEIN Length:92
aligned with LV1B_MOUSE | P01724 from UniProtKB/Swiss-Prot Length:129
Alignment length:104
34 44 54 64 74 84 94 104 114 124
LV1B_MOUSE 25 QESALTTSPGETVTLTCRSSTGAVTTSNYANWVQQKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL 128
SCOP domains d1oauo_ O: Immunoglobulin light chain lambda variable domain, VL-lambda SCOP domains
CATH domains 1oauO00 O:6-109 Immunoglobulins CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee....eeeeeee......hhhhh..eeeee...eeeeeee...ee.......eeeeee..eeeeeee..hhhhheeee.------------.eeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
1oau O 6 QESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFC------------GTKLTVL 109
15 25 35 45 55 65 75 85 | - 105
90 103
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |