1O6U - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   THE CRYSTAL STRUCTURE OF HUMAN SUPERNATANT PROTEIN FACTOR

Authors :   A. Stocker, C. Schulze-Briese, T. Tomizaki

Date :   16 Oct 02 (Deposition) - 17 Oct 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.05

Chains :   Asym. Unit : A,C,E
Biol. Unit 1: A  (1x)
Biol. Unit 2: C  (1x)
Biol. Unit 3: E  (1x)

Keywords :   Lipid Transfer, Cral_trio, Lipid Binding, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. Stocker, T. Tomizaki, C. Schulze-Briese, U. Baumann
Crystal Structure Of Human Supernatant Protein Factor
Structure V. 10 1533 2002
PubMed-ID: 12429094 | Reference-DOI: 10.1016/S0969-2126(02)00884-5

Molecule 1 - SEC14-LIKE PROTEIN 2
	Chains	:	A, C, E
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-28
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	SUPERNATANT PROTEIN FACTOR

		1	2	3
Asymmetric Unit	:	A	C	E
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		C
Biological Unit 3 (1x)	:			E

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 34)

No.	Name	Count	Type	Full Name
1	MSE	31	Mod. Amino Acid	SELENOMETHIONINE
2	PLM	3	Ligand/Ion	PALMITIC ACID

Biological Unit 1 (2, 11)

No.	Name	Count	Type	Full Name
1	MSE	10	Mod. Amino Acid	SELENOMETHIONINE
2	PLM	1	Ligand/Ion	PALMITIC ACID

Biological Unit 2 (2, 11)

No.	Name	Count	Type	Full Name
1	MSE	10	Mod. Amino Acid	SELENOMETHIONINE
2	PLM	1	Ligand/Ion	PALMITIC ACID

Biological Unit 3 (2, 12)

No.	Name	Count	Type	Full Name
1	MSE	11	Mod. Amino Acid	SELENOMETHIONINE
2	PLM	1	Ligand/Ion	PALMITIC ACID

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:153 , HIS A:162 , LEU A:175 , LEU A:189 , ALA A:201	BINDING SITE FOR RESIDUE PLM A1398
2	AC2	SOFTWARE	TYR C:153 , HIS C:162 , LEU C:189 , ALA C:201 , TYR C:202	BINDING SITE FOR RESIDUE PLM C1396
3	AC3	SOFTWARE	ILE E:151 , TYR E:153 , LEU E:175 , LEU E:189 , PHE E:198 , ILE E:205	BINDING SITE FOR RESIDUE PLM E1397

(no "SS Bond" information available for 1O6U)

(no "Cis Peptide Bond" information available for 1O6U)

Asymmetric Unit (1, 3)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024626	R	11	K	S14L2_HUMAN	Polymorphism	757660	A/C/E	R	11	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (1, 1)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024626	R	11	K	S14L2_HUMAN	Polymorphism	757660	A	R	11	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (1, 1)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024626	R	11	K	S14L2_HUMAN	Polymorphism	757660	C	R	11	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (1, 1)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_024626	R	11	K	S14L2_HUMAN	Polymorphism	757660	E	R	11	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (2, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CRAL_TRIO	PS50191	CRAL-TRIO lipid binding domain profile.	S14L2_HUMAN	76-249	3	A:76-249 C:76-249 E:76-249
2	GOLD	PS50866	GOLD domain profile.	S14L2_HUMAN	275-383	3	A:275-383 C:275-383 E:275-383

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CRAL_TRIO	PS50191	CRAL-TRIO lipid binding domain profile.	S14L2_HUMAN	76-249	1	A:76-249 - -
2	GOLD	PS50866	GOLD domain profile.	S14L2_HUMAN	275-383	1	A:275-383 - -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CRAL_TRIO	PS50191	CRAL-TRIO lipid binding domain profile.	S14L2_HUMAN	76-249	1	- C:76-249 -
2	GOLD	PS50866	GOLD domain profile.	S14L2_HUMAN	275-383	1	- C:275-383 -

Biological Unit 3 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	CRAL_TRIO	PS50191	CRAL-TRIO lipid binding domain profile.	S14L2_HUMAN	76-249	1	- - E:76-249
2	GOLD	PS50866	GOLD domain profile.	S14L2_HUMAN	275-383	1	- - E:275-383

(no "Exon" information available for 1O6U)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:394
 aligned with S14L2_HUMAN | O76054 from UniProtKB/Swiss-Prot  Length:403

    Alignment length:398
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390        
          S14L2_HUMAN     1 MSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKMKQLG 398
               SCOP domains d1o6ua1 A:1-75 Supernatant protein factor (SPF), N-terminal domain         d1o6ua3 A:76-274 Supernatant protein factor (SPF), middle domain                                                                                                                                       d1o6ua2 A:275-398 Supernatant protein factor (S    PF), C-terminal domain                                                    SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh..eeeee.....eeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhheee...hhhhhhh...hhhhh.hhhh......................hhhhh..........eeeee....eeeeeeee....eeeeeeeee....eeeeeee.----...hhhhheeeeeeeee......eeeeeee...eeeeeeee........eeeeeeeeee..hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------K--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------CRAL_TRIO  PDB: A:76-249 UniProt: 76-249                                                                                                                                      -------------------------GOLD  PDB: A:275-383 UniProt: 275-383                                                                        --------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o6u A   1 mSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAmLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGmCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKmRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCmFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKImVLGANWKEVLLKHISPDQVPVEYGGTmTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFmSDGADVGFGIFLK----ERQRAGEmTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKmKQLG 398
                            |       10        20        30        40        50    |   60        70        80       |90       100       110       120    |  130       140       150       160       170      |180       190       200       210       220       230       240    |  250       260       270       280       290       300       310       320|    | 330  |    340       350       360       370       380       390   |    
                            |                                                    55-MSE                           88-MSE                              125-MSE                                             177-MSE                                  218-MSE                    245-MSE                                                        308-MSE      321  326      |                                                          394-MSE
                            1-MSE                                                                                                                                                                                                                                                                                                                                     333-MSE

Chain C from PDB  Type:PROTEIN  Length:387
 aligned with S14L2_HUMAN | O76054 from UniProtKB/Swiss-Prot  Length:403

    Alignment length:396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
          S14L2_HUMAN     1 MSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKMKQ 396
               SCOP domains d1o6uc1 C:1-75 Supernatant protein factor (SPF), N-terminal domain         d1o6uc3 C:76-274 Supernatant protein factor (SPF), middle domain                                                                                                                                       d1o6uc2 C:275-396 Supernatant protein factor (SP         F), C-terminal domain                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhh..hhhhh...hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhh..eeeee.....eeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhheee...hhhhhhh...hhhhh.hhhh......................hhhhh..........eeee.....eeeeeeee.....eeeeeeeee...eeeeeeee.---------.eeeeeeeeee......eeeeee....eeeeeeee.........eeeeeeeee..hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------K------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------CRAL_TRIO  PDB: C:76-249 UniProt: 76-249                                                                                                                                      -------------------------GOLD  PDB: C:275-383 UniProt: 275-383                                                                        ------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 1o6u C   1 mSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAmLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGmCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKmRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCmFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKImVLGANWKEVLLKHISPDQVPVEYGGTmTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFmSDGADVGFGIFLKT---------EmTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKmKQ 396
                            |       10        20        30        40        50    |   60        70        80       |90       100       110       120    |  130       140       150       160       170      |180       190       200       210       220       230       240    |  250       260       270       280       290       300       310       320 |       - ||    340       350       360       370       380       390   |  
                            |                                                    55-MSE                           88-MSE                              125-MSE                                             177-MSE                                  218-MSE                    245-MSE                                                        308-MSE       322       332|                                                          394-MSE
                            1-MSE                                                                                                                                                                                                                                                                                                                                     333-MSE

Chain E from PDB  Type:PROTEIN  Length:397
 aligned with S14L2_HUMAN | O76054 from UniProtKB/Swiss-Prot  Length:403

    Alignment length:397
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       
          S14L2_HUMAN     1 MSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKMKQL 397
               SCOP domains d1o6ue1 E:1-75 Supernatant protein factor (SPF), N-terminal domain         d1o6ue3 E:76-274 Supernatant protein factor (SPF), middle domain                                                                                                                                       d1o6ue2 E:275-397 Supernatant protein factor (SPF), C-terminal domain                                                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------------CRAL_TRIO_N-1o6uE04 E:13-59                    ------------------CRAL_TRIO-1o6uE01 E:78-244                                                                                                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ------------CRAL_TRIO_N-1o6uE05 E:13-59                    ------------------CRAL_TRIO-1o6uE02 E:78-244                                                                                                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) ------------CRAL_TRIO_N-1o6uE06 E:13-59                    ------------------CRAL_TRIO-1o6uE03 E:78-244                                                                                                                                             --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (3)
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh..eeeee.....eeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeee....hhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhheee...hhhhhhh...hhhhh.hhhh......................hhhhh..........eeeee....eeeeeeee....eeeeeeeee....eeeeeee.............eeeeeeeee......eeeeeee...eeeeeeee........eeeeeeeeee..hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------K-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------CRAL_TRIO  PDB: E:76-249 UniProt: 76-249                                                                                                                                      -------------------------GOLD  PDB: E:275-383 UniProt: 275-383                                                                        -------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1o6u E   1 mSGRVGDLSPRQKEALAKFRENVQDVLPALPNPDDYFLLRWLRARSFDLQKSEAmLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGmCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKmRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCmFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKImVLGANWKEVLLKHISPDQVPVEYGGTmTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFmSDGADVGFGIFLKTKmGERQRAGEmTEVLPNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDKASEEKmKQL 397
                            |       10        20        30        40        50    |   60        70        80       |90       100       110       120    |  130       140       150       160       170      |180       190       200       210       220       230       240    |  250       260       270       280       290       300       310       320   |   330  |    340       350       360       370       380       390   |   
                            |                                                    55-MSE                           88-MSE                              125-MSE                                             177-MSE                                  218-MSE                    245-MSE                                                        308-MSE         324-MSE  333-MSE                                                      394-MSE
                            1-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "CATH Domain" information available for 1O6U)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: CRAL_TRIO (6)

Family: CRAL_TRIO (3)

Homo sapiens (Human) (2)

1a	CRAL_TRIO-1o6uE01	E:78-244
1b	CRAL_TRIO-1o6uE02	E:78-244
1c	CRAL_TRIO-1o6uE03	E:78-244

Clan: no clan defined [family: CRAL_TRIO_N] (3)

Family: CRAL_TRIO_N (3)

Homo sapiens (Human) (2)

2a	CRAL_TRIO_N-1o6uE04	E:13-59
2b	CRAL_TRIO_N-1o6uE05	E:13-59
2c	CRAL_TRIO_N-1o6uE06	E:13-59

Asymmetric Unit(hide GO term definitions)

Chain A,C,E (S14L2_HUMAN | O76054)

molecular function
	GO:0008289	lipid binding	Interacting selectively and non-covalently with a lipid.
	GO:0005543	phospholipid binding	Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.
	GO:0005215	transporter activity	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
	GO:0008431	vitamin E binding	Interacting selectively and non-covalently with vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.
biological process
	GO:0045893	positive regulation of transcription, DNA-templated	Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0045540	regulation of cholesterol biosynthetic process	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0005622	intracellular	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

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	1o6u
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	S14L2_HUMAN \| O76054	:	1olm 4omj 4omk

1olm	SUPERNATANT PROTEIN FACTOR IN COMPLEX WITH RRR-ALPHA-TOCOPHERYLQUINONE: A LINK BETWEEN OXIDIZED VITAMIN E AND CHOLESTEROL BIOSYNTHESIS

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 34)

Sites (3, 3)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 3)

PROSITE Motifs (2, 6)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (3, 9)

CATH Domains (0, 0)

Pfam Domains (2, 6)

Gene Ontology (14, 14)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File