1MJQ | PD0248 - JenaLib

Biol.Unit 1 - manually (Jmol Viewer)

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   METHIONINE REPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO AN ALTERED MET CONSENSUS OPERATOR SEQUENCE

Authors :   C. W. Garvie, S. E. V. Phillips

Date :   30 Jan 98 (Deposition) - 02 Aug 99 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.40

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F  (1x)
Biol. Unit 2: G,H,I,J,K,L  (1x)

Keywords :   Transcription Regulation, Metj, Methionine Repressor, Sheet- Helix-Helix, S-Adenosyl Methionine, Dna, Complex (Transcription Regulation/Dna), Transcription/Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. W. Garvie, S. E. Phillips
Direct And Indirect Readout In Mutant Met Repressor-Operator Complexes.
Structure Fold. Des. V. 8 905 2000
PubMed-ID: 10986458 | Reference-DOI: 10.1016/S0969-2126(00)00182-9
(for further references see the PDB file header)

Molecule 1 - MUTATED MET CONSENSUS OPERATOR DUPLEX
	Chains	:	E, F, K, L
	Engineered	:	YES
	Other Details	:	SELF-COMPLIMENTARY SEQUENCE BASED ON THE UNDERLYING CONSENSUS SEQUENCE OF NATURALLY OCCURRING MET OPERATORS BUT WITH TWO CG BASE-STEPS MUTATED TO TA
	Synthetic	:	YES

Molecule 2 - METHIONINE REPRESSOR
	Chains	:	A, B, C, D, G, H, I, J
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Gene	:	METJ
	Mutation	:	YES
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562

		1	2	3	4	5	6	7	8	9	10	11	12
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J	K	L
Biological Unit 1 (1x)	:	A	B	C	D	E	F
Biological Unit 2 (1x)	:							G	H	I	J	K	L

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 8)

No.	Name	Count	Type	Full Name
1	SAM	8	Ligand/Ion	S-ADENOSYLMETHIONINE

Biological Unit 1 (1, 4)

No.	Name	Count	Type	Full Name
1	SAM	4	Ligand/Ion	S-ADENOSYLMETHIONINE

Biological Unit 2 (1, 4)

No.	Name	Count	Type	Full Name
1	SAM	4	Ligand/Ion	S-ADENOSYLMETHIONINE

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLU A:39 , ARG A:43 , LEU A:56 , GLU A:59 , ALA A:60 , HIS A:63 , LEU A:70 , PRO A:71 , HOH A:1314 , PHE B:61 , HIS B:63 , ALA B:64 , PHE B:65 , GLY B:67	BINDING SITE FOR RESIDUE SAM A 200
2	AC2	SOFTWARE	GLU A:2 , PHE A:61 , HIS A:63 , ALA A:64 , PHE A:65 , GLY A:67 , GLU B:39 , ARG B:43 , LEU B:56 , GLU B:59 , HIS B:63 , LEU B:70 , PRO B:71 , HOH B:311	BINDING SITE FOR RESIDUE SAM B 200
3	AC3	SOFTWARE	GLU C:39 , ARG C:43 , LEU C:56 , GLU C:59 , HIS C:63 , LEU C:70 , PRO C:71 , HOH C:3311 , PHE D:61 , HIS D:63 , ALA D:64 , PHE D:65 , GLY D:67	BINDING SITE FOR RESIDUE SAM C 199
4	AC4	SOFTWARE	PHE C:61 , HIS C:63 , ALA C:64 , PHE C:65 , GLY C:67 , GLU D:39 , ARG D:43 , LEU D:56 , GLU D:59 , ALA D:60 , HIS D:63 , LEU D:70 , PRO D:71 , HOH D:3304	BINDING SITE FOR RESIDUE SAM D 200
5	AC5	SOFTWARE	GLU G:39 , ARG G:43 , LEU G:56 , GLU G:59 , ALA G:60 , HIS G:63 , LEU G:70 , PRO G:71 , HOH G:7313 , PHE H:61 , HIS H:63 , ALA H:64 , PHE H:65	BINDING SITE FOR RESIDUE SAM G 199
6	AC6	SOFTWARE	PHE G:61 , HIS G:63 , ALA G:64 , PHE G:65 , GLY G:67 , GLU H:39 , ARG H:43 , LEU H:56 , GLU H:59 , HIS H:63 , LEU H:70 , PRO H:71	BINDING SITE FOR RESIDUE SAM H 200
7	AC7	SOFTWARE	GLU I:39 , ARG I:43 , LEU I:56 , GLU I:59 , ALA I:60 , HIS I:63 , LEU I:70 , PRO I:71 , PHE J:61 , HIS J:63 , ALA J:64 , PHE J:65	BINDING SITE FOR RESIDUE SAM I 199
8	AC8	SOFTWARE	PHE I:61 , HIS I:63 , ALA I:64 , PHE I:65 , GLU J:39 , ARG J:43 , LEU J:56 , GLU J:59 , ALA J:60 , HIS J:63 , LEU J:70 , PRO J:71	BINDING SITE FOR RESIDUE SAM J 200

(no "SS Bond" information available for 1MJQ)

(no "Cis Peptide Bond" information available for 1MJQ)

Asymmetric Unit (2, 16)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_METJ_ECOLI_001 *	L	57	Q	METJ_ECOLI	---	---	A/B/C/D/G/H/I/J	L	56	Q
2	UniProt	VAR_METJ_ECOLI_002 *	A	61	T	METJ_ECOLI	---	---	A/B/C/D/G/H/I/J	A	60	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 8)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_METJ_ECOLI_001 *	L	57	Q	METJ_ECOLI	---	---	A/B/C/D	L	56	Q
2	UniProt	VAR_METJ_ECOLI_002 *	A	61	T	METJ_ECOLI	---	---	A/B/C/D	A	60	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 8)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_METJ_ECOLI_001 *	L	57	Q	METJ_ECOLI	---	---	G/H/I/J	L	56	Q
2	UniProt	VAR_METJ_ECOLI_002 *	A	61	T	METJ_ECOLI	---	---	G/H/I/J	A	60	T
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 1MJQ)

(no "Exon" information available for 1MJQ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqa_ A: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqA00 A:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq A   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain B from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqb_ B: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqB00 B:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq B   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain C from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqc_ C: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqC00 C:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq C   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain D from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqd_ D: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqD00 D:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq D   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain E from PDB  Type:DNA  Length:19
                                                   
                 1mjq E  -1 TTAGATATCTAGATATCTA  17
                                     8

Chain F from PDB  Type:DNA  Length:19
                                                   
                 1mjq F  -1 TTAGATATCTAGATATCTA  17
                                     8

Chain G from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqg_ G: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqG00 G:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq G   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain H from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqh_ H: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqH00 H:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq H   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain I from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqi_ I: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqI00 I:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq I   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain J from PDB  Type:PROTEIN  Length:104
 aligned with METJ_ECOLI | P0A8U6 from UniProtKB/Swiss-Prot  Length:105

    Alignment length:104
                                    11        21        31        41        51        61        71        81        91       101    
           METJ_ECOLI     2 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 105
               SCOP domains d1mjqj_ J: Met repressor, MetJ (MetR)                                                                    SCOP domains
               CATH domains 1mjqJ00 J:1-104 MET Apo-Repressor, subunit A                                                             CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................eeeeeeee.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...................hhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------Q---T-------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 1mjq J   1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY 104
                                    10        20        30        40        50        60        70        80        90       100

Chain K from PDB  Type:DNA  Length:19
                                                   
                 1mjq K  -1 TTAGATATCTAGATATCTA  17
                                     8

Chain L from PDB  Type:DNA  Length:19
                                                   
                 1mjq L  -1 TTAGATATCTAGATATCTA  17
                                     8

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Ribbon-helix-helix (65)

Superfamily: Ribbon-helix-helix (65)

Family: Met repressor, MetJ (MetR) (10)

Protein domain: Met repressor, MetJ (MetR) (10)

Escherichia coli [TaxId: 562] (10)

1a	d1mjqa_	A:
1b	d1mjqb_	B:
1c	d1mjqc_	C:
1d	d1mjqd_	D:
1e	d1mjqg_	G:
1f	d1mjqh_	H:
1g	d1mjqi_	I:
1h	d1mjqj_	J:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: MET Apo-Repressor, subunit A (10)

Homologous Superfamily: MET Apo-Repressor, subunit A (10)

[unclassified] (6)

1a	1mjqA00	A:1-104
1b	1mjqB00	B:1-104
1c	1mjqC00	C:1-104
1d	1mjqD00	D:1-104
1e	1mjqG00	G:1-104
1f	1mjqH00	H:1-104
1g	1mjqI00	I:1-104
1h	1mjqJ00	J:1-104

(no "Pfam Domain" information available for 1MJQ)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,G,H,I,J (METJ_ECOLI | P0A8U6)

molecular function
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0003700	transcription factor activity, sequence-specific DNA binding	Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
biological process
	GO:0008652	cellular amino acid biosynthetic process	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
	GO:0009086	methionine biosynthetic process	The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
	GO:0006555	methionine metabolic process	The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.
	GO:0045892	negative regulation of transcription, DNA-templated	Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Asymmetric Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1mjq)

Biological Units
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Access by PDB/NDB ID
	1mjq
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	METJ_ECOLI \| P0A8U6
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	METJ_ECOLI \| P0A8U6	:	1cma 1cmb 1cmc 1mj2 1mjk 1mjl 1mjm 1mjo 1mjp

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 16)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (1, 8)

Pfam Domains (0, 0)

Gene Ontology (10, 10)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File