1M9I - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF PHOSPHORYLATION-MIMICKING MUTANT T356D OF ANNEXIN VI

Authors :   C. Freye-Minks, R. H. Kretsinger, C. E. Creutz

Date :   29 Jul 02 (Deposition) - 07 Aug 02 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.65

Chains :   Asym./Biol. Unit : A

Keywords :   Annexin, Calcium-Binding, Membrane-Binding, Phosphorylation, Mutant T356D, Lipid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Freye-Minks, R. H. Kretsinger, C. E. Creutz
Structural And Dynamic Changes In Human Annexin Vi Induced By A Phosphorylation-Mimicking Mutation, T356D
Biochemistry V. 42 620 2003
PubMed-ID: 12534274 | Reference-DOI: 10.1021/BI026742H
(for further references see the PDB file header)

Molecule 1 - ANNEXIN VI
	Chains	:	A
	Engineered	:	YES
	Expression System	:	SACCHAROMYCES CEREVISIAE
	Expression System Common	:	BAKER'S YEAST
	Expression System Plasmid	:	YEPDB60
	Expression System Strain	:	DB334
	Expression System Taxid	:	4932
	Expression System Vector Type	:	GAL10
	Gene	:	ANX6
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	LIPOCORTIN VI, P68, P70, PROTEIN III, CHROMOBINDIN 20, 67 KDA CALELECTRIN, CALPHOBINDIN-II, CPB- II

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (1, 5)

No.	Name	Count	Type	Full Name
1	CA	5	Ligand/Ion	CALCIUM ION

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	MET A:376 , GLY A:378 , LEU A:379 , GLY A:380 , GLU A:420	BINDING SITE FOR RESIDUE CA A 701
2	AC2	SOFTWARE	MET A:264 , GLY A:266 , GLY A:268 , ASP A:308	BINDING SITE FOR RESIDUE CA A 702
3	AC3	SOFTWARE	MET A:612 , GLY A:614 , ALA A:615 , GLY A:616 , ASP A:656 , HOH A:770	BINDING SITE FOR RESIDUE CA A 703
4	AC4	SOFTWARE	MET A:448 , GLU A:449 , GLY A:450 , GLY A:452 , ASP A:492	BINDING SITE FOR RESIDUE CA A 704
5	AC5	SOFTWARE	MET A:33 , LYS A:34 , GLY A:35 , GLY A:37 , GLU A:77	BINDING SITE FOR RESIDUE CA A 705

(no "SS Bond" information available for 1M9I)

(no "Cis Peptide Bond" information available for 1M9I)

(no "SAP(SNP)/Variant" information available for 1M9I)

Asymmetric/Biological Unit (1, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANNEXIN	PS00223	Annexins repeated domain signature.	ANXA6_HUMAN	37-89 109-161 193-245 268-320 380-432 452-504 541-593 616-668	8	A:37-89 A:109-161 A:193-245 A:268-320 A:380-432 A:452-504 A:541-593 A:616-668

Asymmetric/Biological Unit (24, 24)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1a	ENST00000354546	1a	ENSE00002093216	chr5:150537443-150537241	203	ANXA6_HUMAN	-	0	0	-	-
1.4	ENST00000354546	4	ENSE00002168415	chr5:150527487-150527445	43	ANXA6_HUMAN	1-6	6	0	-	-
1.7	ENST00000354546	7	ENSE00001033507	chr5:150519804-150519714	91	ANXA6_HUMAN	7-37	31	1	A:10-37	28
1.8a	ENST00000354546	8a	ENSE00000841253	chr5:150519008-150518914	95	ANXA6_HUMAN	37-68	32	1	A:37-68	32
1.8e	ENST00000354546	8e	ENSE00000767772	chr5:150518352-150518239	114	ANXA6_HUMAN	69-106	38	1	A:69-106	38
1.9c	ENST00000354546	9c	ENSE00000767771	chr5:150516882-150516792	91	ANXA6_HUMAN	107-137	31	1	A:107-137	31
1.10b	ENST00000354546	10b	ENSE00000767770	chr5:150515896-150515817	80	ANXA6_HUMAN	137-163	27	1	A:137-163	27
1.11	ENST00000354546	11	ENSE00002157799	chr5:150514044-150513988	57	ANXA6_HUMAN	164-182	19	1	A:164-182	19
1.12b	ENST00000354546	12b	ENSE00000767768	chr5:150512748-150512655	94	ANXA6_HUMAN	183-214	32	1	A:183-214	32
1.13	ENST00000354546	13	ENSE00000767767	chr5:150512132-150512037	96	ANXA6_HUMAN	214-246	33	1	A:214-246	33
1.14	ENST00000354546	14	ENSE00000767766	chr5:150510850-150510792	59	ANXA6_HUMAN	246-265	20	1	A:246-265	20
1.15b	ENST00000354546	15b	ENSE00000767765	chr5:150509090-150508968	123	ANXA6_HUMAN	266-306	41	1	A:266-306	41
1.16b	ENST00000354546	16b	ENSE00000767764	chr5:150507800-150507742	59	ANXA6_HUMAN	307-326	20	1	A:307-326	20
1.17b	ENST00000354546	17b	ENSE00000767763	chr5:150506041-150505963	79	ANXA6_HUMAN	326-352	27	1	A:326-352	27
1.18	ENST00000354546	18	ENSE00000767762	chr5:150503928-150503847	82	ANXA6_HUMAN	353-380	28	1	A:353-380	28
1.19	ENST00000354546	19	ENSE00000767761	chr5:150502572-150502478	95	ANXA6_HUMAN	380-411	32	1	A:380-411	32
1.20b	ENST00000354546	20b	ENSE00000767760	chr5:150501821-150501708	114	ANXA6_HUMAN	412-449	38	1	A:412-449	38
1.21b	ENST00000354546	21b	ENSE00000767759	chr5:150498951-150498861	91	ANXA6_HUMAN	450-480	31	1	A:450-480	31
1.22	ENST00000354546	22	ENSE00000767758	chr5:150497398-150497319	80	ANXA6_HUMAN	480-506	27	1	A:480-506	27
1.23	ENST00000354546	23	ENSE00000841252	chr5:150496741-150496688	54	ANXA6_HUMAN	507-524	18	1	A:507-524	18
1.24	ENST00000354546	24	ENSE00001610337	chr5:150490205-150490188	18	ANXA6_HUMAN	525-530	6	1	A:525-530	6
1.25	ENST00000354546	25	ENSE00000767756	chr5:150489407-150489314	94	ANXA6_HUMAN	531-562	32	1	A:531-562	32
1.26	ENST00000354546	26	ENSE00000767755	chr5:150488111-150488016	96	ANXA6_HUMAN	562-594	33	1	A:562-594	33
1.27a	ENST00000354546	27a	ENSE00000767754	chr5:150484864-150484806	59	ANXA6_HUMAN	594-613	20	1	A:594-613	20
1.28	ENST00000354546	28	ENSE00000972889	chr5:150483253-150483131	123	ANXA6_HUMAN	614-654	41	1	A:614-654	41
1.29e	ENST00000354546	29e	ENSE00002130581	chr5:150481068-150480666	403	ANXA6_HUMAN	655-673	19	1	A:655-673	19

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:664
 aligned with ANXA6_HUMAN | P08133 from UniProtKB/Swiss-Prot  Length:673

    Alignment length:664
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669    
          ANXA6_HUMAN    10 YRGSIHDFPGFDPNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGTVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQAREDAQVAAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDEKTLTRIMVSRSEIDLLNIRREFIEKYDKSLHQAIEGDTSGDFLKALLALCGGED 673
               SCOP domains d1m9ia1 A:10-350 Annexin VI                                                                                                                                                                                                                                                                                                                          d1m9ia2 A:351-673 Annexin VI                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains -1m9iA01 A:11-90  [code=1.10.220.10, no name defined]                            1m9iA02 A:91-168  [code=1.10.220.10, no name defined]                         1m9iA03 A:169-251  [code=1.10.220.10, no name defined]                             1m9iA04 A:252-323  [code=1.10.220.10, no name defined]                  ---------------------------------------1m9iA05 A:363-436  [code=1.10.220.10, no name defined]                    1m9iA06 A:437-510  [code=1.10.220.10, no name defined]                    1m9iA07 A:511-599  [code=1.10.220.10, no name defined]                                   1m9iA08 A:600-669  [code=1.10.220.10, no name defined]                ---- CATH domains
           Pfam domains (1) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA01 A:603-668                                         ----- Pfam domains (1)
           Pfam domains (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA02 A:603-668                                         ----- Pfam domains (2)
           Pfam domains (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA03 A:603-668                                         ----- Pfam domains (3)
           Pfam domains (4) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA04 A:603-668                                         ----- Pfam domains (4)
           Pfam domains (5) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA05 A:603-668                                         ----- Pfam domains (5)
           Pfam domains (6) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA06 A:603-668                                         ----- Pfam domains (6)
           Pfam domains (7) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA07 A:603-668                                         ----- Pfam domains (7)
           Pfam domains (8) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Annexin-1m9iA08 A:603-668                                         ----- Pfam domains (8)
         Sec.struct. author ...........hhhhhhhhhhhhh.....hhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhh...hhhhhhhhhhhhh..hhhhhhhh..hhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhh....hhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhh..hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------ANNEXIN  PDB: A:37-89 UniProt: 37-89                 -------------------ANNEXIN  PDB: A:109-161 UniProt: 109-161             -------------------------------ANNEXIN  PDB: A:193-245 UniProt: 193-245             ----------------------ANNEXIN  PDB: A:268-320 UniProt: 268-320             -----------------------------------------------------------ANNEXIN  PDB: A:380-432 UniProt: 380-432             -------------------ANNEXIN  PDB: A:452-504 UniProt: 452-504             ------------------------------------ANNEXIN  PDB: A:541-593 UniProt: 541-593             ----------------------ANNEXIN  PDB: A:616-668 UniProt: 616-668             ----- PROSITE
           Transcript 1 (1) Exon 1.7  PDB: A:10-37      -------------------------------Exon 1.8e  PDB: A:69-106              ------------------------------Exon 1.10b  PDB: A:137-163 Exon 1.11          Exon 1.12b  PDB: A:183-214      -------------------------------Exon 1.14           Exon 1.15b  PDB: A:266-306               Exon 1.16b          --------------------------Exon 1.18  PDB: A:353-380   -------------------------------Exon 1.20b  PDB: A:412-449            Exon 1.21b  PDB: A:450-480     --------------------------Exon 1.23         1.24  Exon 1.25  PDB: A:531-562       -------------------------------Exon 1.27a          Exon 1.28  PDB: A:614-654                Exon 1.29e          Transcript 1 (1)
           Transcript 1 (2) ---------------------------Exon 1.8a  PDB: A:37-68         --------------------------------------Exon 1.9c  PDB: A:107-137      ----------------------------------------------------------------------------Exon 1.13  PDB: A:214-246        -------------------------------------------------------------------------------Exon 1.17b  PDB: A:326-352 ---------------------------Exon 1.19  PDB: A:380-411       --------------------------------------------------------------------Exon 1.22  PDB: A:480-506  -------------------------------------------------------Exon 1.26  PDB: A:562-594        ------------------------------------------------------------------------------- Transcript 1 (2)
                 1m9i A  10 YRGSIHDFPGFDPNQDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYSMIKNDTSGEYKKTLLKLSGGDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQAREDAQVAAEILEIADTPSGDKTSLETRFMTILCTRSYPHLRRVFQEFIKMTNYDVEHTIKKEMSGDVRDAFVAIVQSVKNKPLFFADKLYKSMKGAGTDDKTLTRIMVSRSEIDLLNIRREFIEKYDKSLHQAIEGDTSGDFLKALLALCGGED 673
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Annexin (61)

Superfamily: Annexin (61)

Family: Annexin (56)

Protein domain: Annexin VI (2)

Cow (Bos taurus) [TaxId: 9913] (2)

1a	d1m9ia1	A:10-350
1b	d1m9ia2	A:351-673

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Alpha (13335)

Architecture: Orthogonal Bundle (10391)

Topology: Annexin V; domain 1 (80)

Homologous Superfamily: [code=1.10.220.10, no name defined] (58)

Human (Homo sapiens) (22)

1a	1m9iA02	A:91-168
1b	1m9iA03	A:169-251
1c	1m9iA07	A:511-599
1d	1m9iA05	A:363-436
1e	1m9iA01	A:11-90
1f	1m9iA04	A:252-323
1g	1m9iA08	A:600-669
1h	1m9iA06	A:437-510

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: no clan defined [family: Annexin] (14)

Family: Annexin (14)

Homo sapiens (Human) (4)

1a	Annexin-1m9iA01	A:603-668
1b	Annexin-1m9iA02	A:603-668
1c	Annexin-1m9iA03	A:603-668
1d	Annexin-1m9iA04	A:603-668
1e	Annexin-1m9iA05	A:603-668
1f	Annexin-1m9iA06	A:603-668
1g	Annexin-1m9iA07	A:603-668
1h	Annexin-1m9iA08	A:603-668

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (ANXA6_HUMAN | P08133)

molecular function
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0005544	calcium-dependent phospholipid binding	Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
	GO:0048306	calcium-dependent protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium.
	GO:0015485	cholesterol binding	Interacting selectively and non-covalently with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.
	GO:0015276	ligand-gated ion channel activity	Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.
	GO:0008289	lipid binding	Interacting selectively and non-covalently with a lipid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0032403	protein complex binding	Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
	GO:0097190	apoptotic signaling pathway	A series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.
	GO:0006816	calcium ion transport	The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0034220	ion transmembrane transport	A process in which an ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
	GO:0051560	mitochondrial calcium ion homeostasis	Any process involved in the maintenance of an internal steady state of calcium ions within the cytoplasm of a cell or between mitochondria and their surroundings.
	GO:0051260	protein homooligomerization	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
	GO:0006937	regulation of muscle contraction	Any process that modulates the frequency, rate or extent of muscle contraction.
cellular component
	GO:0016324	apical plasma membrane	The region of the plasma membrane located at the apical end of the cell.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005925	focal adhesion	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
	GO:0014704	intercalated disc	A complex cell-cell junction at which myofibrils terminate in cardiomyocytes; mediates mechanical and electrochemical integration between individual cardiomyocytes. The intercalated disc contains regions of tight mechanical attachment (fasciae adherentes and desmosomes) and electrical coupling (gap junctions) between adjacent cells.
	GO:0031902	late endosome membrane	The lipid bilayer surrounding a late endosome.
	GO:0005765	lysosomal membrane	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
	GO:0042470	melanosome	A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0048471	perinuclear region of cytoplasm	Cytoplasm situated near, or occurring around, the nucleus.
	GO:0043234	protein complex	A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
	GO:0042383	sarcolemma	The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
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Access by PDB/NDB ID
	1m9i
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	ANXA6_HUMAN \| P08133
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	ANXA6_HUMAN \| P08133
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(no "Entries Sharing at Least One Protein Chain" available for 1M9I)

1avc	1AVC IS THE NATIVE BOVINE STRUCTURE (CALCIUM-BOUND)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 5)

Sites (5, 5)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 8)

Exons (24, 24)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (1, 8)

Pfam Domains (1, 8)

Gene Ontology (30, 30)

Visualization

Interactive Views

Still Images

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Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File