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Summary Information (see also Sequences/Alignments below) |
Asymmetric/Biological Unit (1, 2)
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Asymmetric Unit (2, 2)
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Asymmetric/Biological Unit
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(no "Cis Peptide Bond" information available for 1M6D) |
Asymmetric/Biological Unit (3, 6)
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Asymmetric/Biological Unit (2, 4)
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Asymmetric/Biological UnitChain A from PDB Type:PROTEIN Length:214 aligned with CATF_HUMAN | Q9UBX1 from UniProtKB/Swiss-Prot Length:484 Alignment length:214 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 CATF_HUMAN 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484 SCOP domains d1m6da_ A: Cathepsin F SCOP domains CATH domains 1m6dA00 A:1-212 Cysteine proteinases CATH domains Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains SAPs(SNPs) --------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------------A---------------------L---- SAPs(SNPs) PROSITE ------------------THIOL_PROTEA--------------------------------------------------------------------------------------------------------------------------------THIOL_PROTE--------------------------------------------- PROSITE Transcript 1 (1) Exon 1.7a Exon 1.8a PDB: A:20-52 --------------------------Exon 1.9a PDB: A:78B-119 (gaps) ---------------------Exon 1.10b UniProt: 411-441 -------------------Exon 1.11b Transcript 1 (1) Transcript 1 (2) ---------------------------------------------------Exon 1.8c UniProt: 322-349 ---------------------------------------Exon 1.9c ------------------------------Exon 1.10e ------------------------ Transcript 1 (2) 1m6d A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 212 10 20 30 40 50 60 70 |||79 89|| 99 || 110 120 130 ||142 154A|||| 158 167A||| 174 184 198 208 76||| 89A| 103| 136| 149| ||||| | 167A||| 193| 78|| 91 105 139 152 ||||| | 167B|| 198 78A| 154A|||| | 167C| 78B 155A||| | 167D 156A|| | 152B| | 153A | 156B Chain B from PDB Type:PROTEIN Length:214 aligned with CATF_HUMAN | Q9UBX1 from UniProtKB/Swiss-Prot Length:484 Alignment length:214 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 CATF_HUMAN 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484 SCOP domains d1m6db_ B: Cathepsin F SCOP domains CATH domains 1m6dB00 B:1-212 Cysteine proteinases CATH domains Pfam domains (1) Peptidase_C1-1m6dB01 B:1-210 -- Pfam domains (1) Pfam domains (2) Peptidase_C1-1m6dB02 B:1-210 -- Pfam domains (2) SAPs(SNPs) --------------------------------------------------R----------------------------------------------------------------------------------------------------------------------------------------A---------------------L---- SAPs(SNPs) PROSITE ------------------THIOL_PROTEA--------------------------------------------------------------------------------------------------------------------------------THIOL_PROTE--------------------------------------------- PROSITE Transcript 1 (1) Exon 1.7a Exon 1.8a PDB: B:20-52 --------------------------Exon 1.9a PDB: B:78B-119 (gaps) ---------------------Exon 1.10b UniProt: 411-441 -------------------Exon 1.11b Transcript 1 (1) Transcript 1 (2) ---------------------------------------------------Exon 1.8c UniProt: 322-349 ---------------------------------------Exon 1.9c ------------------------------Exon 1.10e ------------------------ Transcript 1 (2) 1m6d B 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 212 10 20 30 40 50 60 70 |||79 89|| 99 || 110 120 130 ||142 154A|||| 158 167A||| 174 184 198 208 76||| 89A| 103| 136| 149| ||||| | 167A||| 193| 78|| 91 105 139 152 ||||| | 167B|| 198 78A| 154A|||| | 167C| 78B 155A||| | 167D 156A|| | 152B| | 153A | 156B
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Asymmetric/Biological Unit
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Asymmetric/Biological Unit
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Asymmetric/Biological Unit
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Asymmetric/Biological Unit(hide GO term definitions) Chain A,B (CATF_HUMAN | Q9UBX1)
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