Chain A from PDB Type:PROTEIN Length:465
aligned with TACY_CLOP1 | Q0TUS0 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOP1 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3ia_ A: Perfringolysin SCOP domains
CATH domains 1m3iA01 1m3iA02 A:54-89,A:374-390 1m3iA01 A:36-53,A:90-178,A:229-274,A:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iA01 A:36-53,A:90-178,A:229-274,A:350-373 ---------------------------------------------------------------------------1m3iA01 1m3iA02 1m3iA04 A:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh....hhhhhh............eeeeee..eeeeee.eeeeeee...eee.................hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhh..hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeeee.........eee.hhhhhhhhhhhh.eee.....eeeeeeeee..........eeeeeee..eeeee.eeeeeee.....eeeeeeeee...........eeee......ee...eeeeeee...eeeeeeeee.....hhhhh.eeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i A 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain A from PDB Type:PROTEIN Length:465
aligned with TACY_CLOPE | P0C2E9 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOPE 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3ia_ A: Perfringolysin SCOP domains
CATH domains 1m3iA01 1m3iA02 A:54-89,A:374-390 1m3iA01 A:36-53,A:90-178,A:229-274,A:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iA01 A:36-53,A:90-178,A:229-274,A:350-373 ---------------------------------------------------------------------------1m3iA01 1m3iA02 1m3iA04 A:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh....hhhhhh............eeeeee..eeeeee.eeeeeee...eee.................hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhh..hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeeee.........eee.hhhhhhhhhhhh.eee.....eeeeeeeee..........eeeeeee..eeeee.eeeeeee.....eeeeeeeee...........eeee......ee...eeeeeee...eeeeeeeee.....hhhhh.eeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i A 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain B from PDB Type:PROTEIN Length:465
aligned with TACY_CLOP1 | Q0TUS0 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOP1 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3ib_ B: Perfringolysin SCOP domains
CATH domains 1m3iB01 1m3iB02 B:54-89,B:374-390 1m3iB01 B:36-53,B:90-178,B:229-274,B:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iB01 B:36-53,B:90-178,B:229-274,B:350-373 ---------------------------------------------------------------------------1m3iB01 1m3iB02 1m3iB04 B:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh....hhhhhheeee........eeeee....eeeeeeeeeeeee....ee..hhhhh..........hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhh..hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhh.....hhhhhhhhhheeeeeeee........eeee.hhhhhhhhhhhh.eee.....eeeeeeeee.........eeeeeeeeeeeeee..eeeeeee.....eeeeeeeeeeee.....eeeeeee...........eeeeeee...eeeeeeeeee....hhhhheeeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i B 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain B from PDB Type:PROTEIN Length:465
aligned with TACY_CLOPE | P0C2E9 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOPE 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3ib_ B: Perfringolysin SCOP domains
CATH domains 1m3iB01 1m3iB02 B:54-89,B:374-390 1m3iB01 B:36-53,B:90-178,B:229-274,B:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iB01 B:36-53,B:90-178,B:229-274,B:350-373 ---------------------------------------------------------------------------1m3iB01 1m3iB02 1m3iB04 B:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh....hhhhhheeee........eeeee....eeeeeeeeeeeee....ee..hhhhh..........hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhh..hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhh.....hhhhhhhhhheeeeeeee........eeee.hhhhhhhhhhhh.eee.....eeeeeeeee.........eeeeeeeeeeeeee..eeeeeee.....eeeeeeeeeeee.....eeeeeee...........eeeeeee...eeeeeeeeee....hhhhheeeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i B 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain C from PDB Type:PROTEIN Length:465
aligned with TACY_CLOP1 | Q0TUS0 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOP1 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3ic_ C: Perfringolysin SCOP domains
CATH domains 1m3iC01 1m3iC02 C:54-89,C:374-390 1m3iC01 C:36-53,C:90-178,C:229-274,C:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iC01 C:36-53,C:90-178,C:229-274,C:350-373 ---------------------------------------------------------------------------1m3iC01 1m3iC02 1m3iC04 C:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhh......................eeeee..eeeeeeeeeee.......ee.................hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhhh.hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhh....hhhhhhhhhhheeeeeeee.........eee..hhhhhhhhhhh.eee.....eeeeeeeee.............eeeeeeee....eeeeeee.....eeeeeeeeeeee.....eeeeeee...........eeeeeee...eeeeeeeeee....hhhhh.eeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i C 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain C from PDB Type:PROTEIN Length:465
aligned with TACY_CLOPE | P0C2E9 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOPE 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3ic_ C: Perfringolysin SCOP domains
CATH domains 1m3iC01 1m3iC02 C:54-89,C:374-390 1m3iC01 C:36-53,C:90-178,C:229-274,C:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iC01 C:36-53,C:90-178,C:229-274,C:350-373 ---------------------------------------------------------------------------1m3iC01 1m3iC02 1m3iC04 C:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhh......................eeeee..eeeeeeeeeee.......ee.................hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhhh.hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhh....hhhhhhhhhhheeeeeeee.........eee..hhhhhhhhhhh.eee.....eeeeeeeee.............eeeeeeee....eeeeeee.....eeeeeeeeeeee.....eeeeeee...........eeeeeee...eeeeeeeeee....hhhhh.eeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i C 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain D from PDB Type:PROTEIN Length:465
aligned with TACY_CLOP1 | Q0TUS0 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOP1 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3id_ D: Perfringolysin SCOP domains
CATH domains 1m3iD01 1m3iD02 D:54-89,D:374-390 1m3iD01 D:36-53,D:90-178,D:229-274,D:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iD01 D:36-53,D:90-178,D:229-274,D:350-373 ---------------------------------------------------------------------------1m3iD01 1m3iD02 1m3iD04 D:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains (1) Thiol_cytolysin-1m3iD01 D:36-499 - Pfam domains (1)
Pfam domains (2) Thiol_cytolysin-1m3iD02 D:36-499 - Pfam domains (2)
Pfam domains (3) Thiol_cytolysin-1m3iD03 D:36-499 - Pfam domains (3)
Pfam domains (4) Thiol_cytolysin-1m3iD04 D:36-499 - Pfam domains (4)
Sec.struct. author .hhhhhhh....hhhhhhee.............ee...eeeeee..eeeeee....ee.................hhhhhh............eeeee.........eeee...hhhhhhhhhhhhhhhhhhhh....eee.eeeeeeee..hhhhhhhhhh.hhhhhhhhh..hhhhhhh...eeeeeeeeeeeeeeee....hhhhh.....hhhhhhhhh......eeeeeeeeeeeeeeeeeee.....hhhhhhhhhhhh.hhhhhhhhhhhhhheeeeeeeee.......eeee..hhhhhhhhhhh.eee.....eeeeeeeee.........eeeeeee..eeeeee.eeeeeee.....eeeeeeeeeeee.....eeeeeee...........eeeeeee...eeeeeeeeee....hhhhh.eeeeeeee....eeeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i D 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
Chain D from PDB Type:PROTEIN Length:465
aligned with TACY_CLOPE | P0C2E9 from UniProtKB/Swiss-Prot Length:500
Alignment length:465
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
TACY_CLOPE 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
SCOP domains d1m3id_ D: Perfringolysin SCOP domains
CATH domains 1m3iD01 1m3iD02 D:54-89,D:374-390 1m3iD01 D:36-53,D:90-178,D:229-274,D:350-373 HIV-1 Reverse Transcriptase; Chain --------------------------------------------------1m3iD01 D:36-53,D:90-178,D:229-274,D:350-373 ---------------------------------------------------------------------------1m3iD01 1m3iD02 1m3iD04 D:391-500 Perfringolysin, domain 4 CATH domains
Pfam domains (1) Thiol_cytolysin-1m3iD01 D:36-499 - Pfam domains (1)
Pfam domains (2) Thiol_cytolysin-1m3iD02 D:36-499 - Pfam domains (2)
Pfam domains (3) Thiol_cytolysin-1m3iD03 D:36-499 - Pfam domains (3)
Pfam domains (4) Thiol_cytolysin-1m3iD04 D:36-499 - Pfam domains (4)
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SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THIOL_CYTOLY-------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m3i D 36 QSIDSGISSLSYNRNEVLASNGDKIESFVPKEGKKAGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADKALVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSSTHTLPARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSADLPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDVPLTNNINVSIWGTTLYPGSSITYN 500
45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225 235 245 255 265 275 285 295 305 315 325 335 345 355 365 375 385 395 405 415 425 435 445 455 465 475 485 495
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |