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(-) Description

Title :  HUMAN TISSUE TRANSGLUTAMINASE IN GDP BOUND FORM
 
Authors :  S. Liu, R. A. Cerione, J. Clardy
Date :  24 Jan 02  (Deposition) - 13 Mar 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,F  (1x)
Biol. Unit 3:  D,E  (1x)
Keywords :  Tissue Transglutaminase; Gtp Binding Protein; Crystallography, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Liu, R. A. Cerione, J. Clardy
Structural Basis For The Guanine Nucleotide-Binding Activity Of Tissue Transglutaminase And Its Regulation Of Transamidation Activity.
Proc. Natl. Acad. Sci. Usa V. 99 2743 2002
PubMed-ID: 11867708  |  Reference-DOI: 10.1073/PNAS.042454899
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
    Chains: A, B, C, D, E, F
    EC Number: 2.3.2.13
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: TGM2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TISSUE TRANSGLUTAMINASE, TGASE C, TGC, TGASE-H

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A C   
Biological Unit 2 (1x):  B   F
Biological Unit 3 (1x):    DE 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric Unit (1, 6)
No.NameCountTypeFull Name
1GDP6Ligand/IonGUANOSINE-5'-DIPHOSPHATE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1GDP2Ligand/IonGUANOSINE-5'-DIPHOSPHATE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1GDP2Ligand/IonGUANOSINE-5'-DIPHOSPHATE
Biological Unit 3 (1, 2)
No.NameCountTypeFull Name
1GDP2Ligand/IonGUANOSINE-5'-DIPHOSPHATE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:174 , ARG A:476 , ARG A:478 , VAL A:479 , GLY A:480 , GLN A:481 , SER A:482 , MET A:483 , ARG A:580 , LEU A:582 , TYR A:583BINDING SITE FOR RESIDUE GDP A 700
2AC2SOFTWAREPHE B:174 , ARG B:476 , ARG B:478 , VAL B:479 , GLY B:480 , GLN B:481 , SER B:482 , MET B:483 , ARG B:580 , LEU B:582 , TYR B:583BINDING SITE FOR RESIDUE GDP B 701
3AC3SOFTWAREPHE C:174 , ARG C:476 , ARG C:478 , VAL C:479 , GLY C:480 , GLN C:481 , SER C:482 , MET C:483 , ARG C:580 , LEU C:582 , TYR C:583 , HOH C:751BINDING SITE FOR RESIDUE GDP C 702
4AC4SOFTWAREPHE D:174 , ARG D:476 , ARG D:478 , VAL D:479 , GLY D:480 , GLN D:481 , SER D:482 , MET D:483 , ARG D:580 , LEU D:582 , TYR D:583BINDING SITE FOR RESIDUE GDP D 703
5AC5SOFTWAREPHE E:174 , ARG E:476 , ARG E:478 , VAL E:479 , GLY E:480 , GLN E:481 , SER E:482 , MET E:483 , ARG E:580 , LEU E:582 , TYR E:583BINDING SITE FOR RESIDUE GDP E 704
6AC6SOFTWAREPHE F:174 , ARG F:476 , ARG F:478 , VAL F:479 , GLY F:480 , GLN F:481 , SER F:482 , MET F:483 , ARG F:580 , LEU F:582 , TYR F:583BINDING SITE FOR RESIDUE GDP F 705

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1KV3)

(-) Cis Peptide Bonds  (18, 18)

Asymmetric Unit
No.Residues
1Lys A:273 -Tyr A:274
2Gly A:372 -Pro A:373
3Lys A:387 -Tyr A:388
4Lys B:273 -Tyr B:274
5Gly B:372 -Pro B:373
6Lys B:387 -Tyr B:388
7Lys C:273 -Tyr C:274
8Gly C:372 -Pro C:373
9Lys C:387 -Tyr C:388
10Lys D:273 -Tyr D:274
11Gly D:372 -Pro D:373
12Lys D:387 -Tyr D:388
13Lys E:273 -Tyr E:274
14Gly E:372 -Pro E:373
15Lys E:387 -Tyr E:388
16Lys F:273 -Tyr F:274
17Gly F:372 -Pro F:373
18Lys F:387 -Tyr F:388

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (8, 48)

Asymmetric Unit (8, 48)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_052553R76HTGM2_HUMANPolymorphism41274720A/B/C/D/E/FR76H
2UniProtVAR_055357R214HTGM2_HUMANPolymorphism45530133A/B/C/D/E/FR214H
3UniProtVAR_055358Q324RTGM2_HUMANPolymorphism45567334A/B/C/D/E/FQ324R
4UniProtVAR_037998M330RTGM2_HUMANUnclassified141603506A/B/C/D/E/FM330R
5UniProtVAR_037999I331NTGM2_HUMANUnclassified  ---A/B/C/D/E/FI331N
6UniProtVAR_055359R436WTGM2_HUMANPolymorphism45629036A/B/C/D/E/FR436W
7UniProtVAR_052554P536STGM2_HUMANPolymorphism45556333A/B/C/D/E/FP536S
8UniProtVAR_036554G660VTGM2_HUMANUnclassified  ---A/B/C/D/E/FG660V
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_052553R76HTGM2_HUMANPolymorphism41274720A/CR76H
2UniProtVAR_055357R214HTGM2_HUMANPolymorphism45530133A/CR214H
3UniProtVAR_055358Q324RTGM2_HUMANPolymorphism45567334A/CQ324R
4UniProtVAR_037998M330RTGM2_HUMANUnclassified141603506A/CM330R
5UniProtVAR_037999I331NTGM2_HUMANUnclassified  ---A/CI331N
6UniProtVAR_055359R436WTGM2_HUMANPolymorphism45629036A/CR436W
7UniProtVAR_052554P536STGM2_HUMANPolymorphism45556333A/CP536S
8UniProtVAR_036554G660VTGM2_HUMANUnclassified  ---A/CG660V
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_052553R76HTGM2_HUMANPolymorphism41274720B/FR76H
2UniProtVAR_055357R214HTGM2_HUMANPolymorphism45530133B/FR214H
3UniProtVAR_055358Q324RTGM2_HUMANPolymorphism45567334B/FQ324R
4UniProtVAR_037998M330RTGM2_HUMANUnclassified141603506B/FM330R
5UniProtVAR_037999I331NTGM2_HUMANUnclassified  ---B/FI331N
6UniProtVAR_055359R436WTGM2_HUMANPolymorphism45629036B/FR436W
7UniProtVAR_052554P536STGM2_HUMANPolymorphism45556333B/FP536S
8UniProtVAR_036554G660VTGM2_HUMANUnclassified  ---B/FG660V
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (8, 16)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
1UniProtVAR_052553R76HTGM2_HUMANPolymorphism41274720D/ER76H
2UniProtVAR_055357R214HTGM2_HUMANPolymorphism45530133D/ER214H
3UniProtVAR_055358Q324RTGM2_HUMANPolymorphism45567334D/EQ324R
4UniProtVAR_037998M330RTGM2_HUMANUnclassified141603506D/EM330R
5UniProtVAR_037999I331NTGM2_HUMANUnclassified  ---D/EI331N
6UniProtVAR_055359R436WTGM2_HUMANPolymorphism45629036D/ER436W
7UniProtVAR_052554P536STGM2_HUMANPolymorphism45556333D/EP536S
8UniProtVAR_036554G660VTGM2_HUMANUnclassified  ---D/EG660V
  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 6)

Asymmetric Unit (1, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TRANSGLUTAMINASESPS00547 Transglutaminases active site.TGM2_HUMAN275-292
 
 
 
 
 		  6A:275-292
B:275-292
C:275-292
D:275-292
E:275-292
F:275-292
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TRANSGLUTAMINASESPS00547 Transglutaminases active site.TGM2_HUMAN275-292
 
 
 
 
 		  2A:275-292
-
C:275-292
-
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TRANSGLUTAMINASESPS00547 Transglutaminases active site.TGM2_HUMAN275-292
 
 
 
 
 		  2-
B:275-292
-
-
-
F:275-292
Biological Unit 3 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1TRANSGLUTAMINASESPS00547 Transglutaminases active site.TGM2_HUMAN275-292
 
 
 
 
 		  2-
-
-
D:275-292
E:275-292
-

(-) Exons   (12, 72)

Asymmetric Unit (12, 72)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.2aENST000003614752aENSE00001922845chr20:36793774-36793591184TGM2_HUMAN1-440--
1.3bENST000003614753bENSE00000800527chr20:36790001-36789822180TGM2_HUMAN4-64616A:15-64 (gaps)
B:15-64 (gaps)
C:15-64 (gaps)
D:15-64 (gaps)
E:15-64 (gaps)
F:15-64 (gaps)		50
50
50
50
50
50
1.4aENST000003614754aENSE00000661931chr20:36784491-36784249243TGM2_HUMAN64-145826A:64-145 (gaps)
B:64-145 (gaps)
C:64-145 (gaps)
D:64-145 (gaps)
E:64-145 (gaps)
F:64-145 (gaps)		82
82
82
82
82
82
1.5bENST000003614755bENSE00000661930chr20:36779459-36779341119TGM2_HUMAN145-184406A:145-184
B:145-184
C:145-184
D:145-184
E:145-184
F:145-184		40
40
40
40
40
40
1.6ENST000003614756ENSE00000800526chr20:36776491-36776363129TGM2_HUMAN185-227436A:185-227
B:185-227
C:185-227
D:185-227
E:185-227
F:185-227		43
43
43
43
43
43
1.7bENST000003614757bENSE00000800525chr20:36775296-36775119178TGM2_HUMAN228-287606A:228-287
B:228-287
C:228-287
D:228-287
E:228-287
F:228-287		60
60
60
60
60
60
1.8ENST000003614758ENSE00000661927chr20:36770601-36770466136TGM2_HUMAN287-332466A:287-332
B:287-332
C:287-332
D:287-332
E:287-332
F:287-332		46
46
46
46
46
46
1.9ENST000003614759ENSE00000661926chr20:36769787-36769684104TGM2_HUMAN332-367366A:332-367
B:332-367
C:332-367
D:332-367
E:332-367
F:332-367		36
36
36
36
36
36
1.10ENST0000036147510ENSE00000661925chr20:36768056-36767814243TGM2_HUMAN367-448826A:367-448
B:367-448
C:367-448
D:367-448
E:367-448
F:367-448		82
82
82
82
82
82
1.11aENST0000036147511aENSE00000661924chr20:36766787-36766515273TGM2_HUMAN448-539926A:448-539
B:448-539
C:448-539
D:448-539
E:448-539
F:448-539		92
92
92
92
92
92
1.12bENST0000036147512bENSE00000661923chr20:36760902-36760742161TGM2_HUMAN539-592546A:539-592
B:539-592
C:539-592
D:539-592
E:539-592
F:539-592		54
54
54
54
54
54
1.13bENST0000036147513bENSE00000661922chr20:36759631-36759495137TGM2_HUMAN593-638466A:593-638
B:593-638
C:593-638
D:593-638
E:593-638
F:593-638		46
46
46
46
46
46
1.14aENST0000036147514aENSE00001904837chr20:36758771-367568631909TGM2_HUMAN638-687506A:638-687
B:638-687
C:638-687
D:638-687
E:638-687
F:638-687		50
50
50
50
50
50

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:651
 aligned with TGM2_HUMAN | P21980 from UniProtKB/Swiss-Prot  Length:687

    Alignment length:673
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
           TGM2_HUMAN    15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
               SCOP domains d1kv3a1 A:15-145 Transglutami            nase N-terminal domain                                                                    d1kv3a4 A:146-468 Transglutaminase catalytic domain                                                                                                                                                                                                                                                                                d1kv3a2 A:469-585 Transglutaminase, two C-terminal domains                                                           d1kv3a3 A:586-687 Transglutaminase, two C-terminal domains                                             SCOP domains
               CATH domains 1kv3A01 A:15-147 Immunoglobul            ins                                                                                         1kv3A02 A:148-470 Coagulation Factor XIII, subunit A, domain 2                                                                                                                                                                                                                                                                     1kv3A03 A:471-587 Immunoglobulins                                                                                    1kv3A04 A:588-685 Immunoglobulins                                                                 -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh........eeee...eeeee.------------..eeeee...........eeeee..........eeeeee......eeeee.......eeeeeee...----------.eeeee.............hhhhhhhhh...eeeeeeee..eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eee..........hhhhh..hhhhhhhhhh.....eeeehhhhhhhhhhhhhhhh...eeeeeeeee........eeeeee..............eeeeeeeeeee..........eeeeeeeeeeee..eeeeeeeeehhhhhhh......hhhhhhhhhhheeeeeee.....eee.ee.........eee......eeehhhhhh....hhhhhhhhhhh.............eeeeee..........eeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeeeee...eeeeeeeeehhhhhh.......eeeeeeeeee....eeeeeeeeee......eeeee........eeeeeeee..........eeeee........eeee.........eeeeeeee.......eeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------H-----------------------------------------------------------------------------------------------------------------------------------------H-------------------------------------------------------------------------------------------------------------R-----RN--------------------------------------------------------------------------------------------------------W---------------------------------------------------------------------------------------------------S---------------------------------------------------------------------------------------------------------------------------V--------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSGLUTAMINASES ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: A:15-64 (gaps) UniProt: 4-64      --------------------------------------------------------------------------------Exon 1.5b  PDB: A:145-184               Exon 1.6  PDB: A:185-227 UniProt: 185-227  Exon 1.7b  PDB: A:228-287 UniProt: 228-287                  -------------------------------------------------------------------------------Exon 1.10  PDB: A:367-448 UniProt: 367-448                                        ------------------------------------------------------------------------------------------Exon 1.12b  PDB: A:539-592 UniProt: 539-592           Exon 1.13b  PDB: A:593-638 UniProt: 593-638   ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.4a  PDB: A:64-145 (gaps) UniProt: 64-145                                   ---------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: A:287-332 UniProt: 287-332     -------------------------------------------------------------------------------------------------------------------Exon 1.11a  PDB: A:448-539 UniProt: 448-539                                                 --------------------------------------------------------------------------------------------------Exon 1.14a  PDB: A:638-687 UniProt: 638-687        Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:332-367            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1kv3 A  15 ETNGRDHHTADLCREKLVVRRGQPFWLTL------------SLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEAS----------GHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
                                    24        34        |-         - |      64        74        84        94       104       114       | -       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
                                                       43           56                                                               122        133                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:651
 aligned with TGM2_HUMAN | P21980 from UniProtKB/Swiss-Prot  Length:687

    Alignment length:673
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
           TGM2_HUMAN    15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
               SCOP domains d1kv3b1 B:15-145 Transglutami            nase N-terminal domain                                                                    d1kv3b4 B:146-468 Transglutaminase catalytic domain                                                                                                                                                                                                                                                                                d1kv3b2 B:469-585 Transglutaminase, two C-terminal domains                                                           d1kv3b3 B:586-687 Transglutaminase, two C-terminal domains                                             SCOP domains
               CATH domains 1kv3B01 B:15-147 Immunoglobul            ins                                                                                         1kv3B02 B:148-470 Coagulation Factor XIII, subunit A, domain 2                                                                                                                                                                                                                                                                     1kv3B03 B:471-587 Immunoglobulins                                                                                    1kv3B04 B:588-685 Immunoglobulins                                                                 -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh........eeee....eeee.------------..eeeee...........eeeee..........eeeeee......eeeee.......eeeeeee...----------.eeeee.............hhhhhhhhh...eeeeeeee..eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eee..........hhhhh..hhhhhhhhhh.....eeeehhhhhhhhhhhhhhhh...eeeeeeeee........eeeeee..............eeeeeeeeeee..........eeeeeeeeeeee..eeeeeeeeehhhhhhh......hhhhhhhhhhheeeeeee.....eee.ee.........eee......eeehhhhhh....hhhhhhhhhhh.............eeeeee..........eeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeeeee...eeeeeeeeehhhhhh.......eeeeeeeeee....eeeeeeeeee......eeeee........eeeeeeee..........eeeee........eeee.........eeeeeeee.......eeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------H-----------------------------------------------------------------------------------------------------------------------------------------H-------------------------------------------------------------------------------------------------------------R-----RN--------------------------------------------------------------------------------------------------------W---------------------------------------------------------------------------------------------------S---------------------------------------------------------------------------------------------------------------------------V--------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSGLUTAMINASES ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: B:15-64 (gaps) UniProt: 4-64      --------------------------------------------------------------------------------Exon 1.5b  PDB: B:145-184               Exon 1.6  PDB: B:185-227 UniProt: 185-227  Exon 1.7b  PDB: B:228-287 UniProt: 228-287                  -------------------------------------------------------------------------------Exon 1.10  PDB: B:367-448 UniProt: 367-448                                        ------------------------------------------------------------------------------------------Exon 1.12b  PDB: B:539-592 UniProt: 539-592           Exon 1.13b  PDB: B:593-638 UniProt: 593-638   ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.4a  PDB: B:64-145 (gaps) UniProt: 64-145                                   ---------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: B:287-332 UniProt: 287-332     -------------------------------------------------------------------------------------------------------------------Exon 1.11a  PDB: B:448-539 UniProt: 448-539                                                 --------------------------------------------------------------------------------------------------Exon 1.14a  PDB: B:638-687 UniProt: 638-687        Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:332-367            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1kv3 B  15 ETNGRDHHTADLCREKLVVRRGQPFWLTL------------SLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEAS----------GHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
                                    24        34        |-         - |      64        74        84        94       104       114       | -       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
                                                       43           56                                                               122        133                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:651
 aligned with TGM2_HUMAN | P21980 from UniProtKB/Swiss-Prot  Length:687

    Alignment length:673
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
           TGM2_HUMAN    15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
               SCOP domains d1kv3c1 C:15-145 Transglutami            nase N-terminal domain                                                                    d1kv3c4 C:146-468 Transglutaminase catalytic domain                                                                                                                                                                                                                                                                                d1kv3c2 C:469-585 Transglutaminase, two C-terminal domains                                                           d1kv3c3 C:586-687 Transglutaminase, two C-terminal domains                                             SCOP domains
               CATH domains 1kv3C01 C:15-147 Immunoglobul            ins                                                                                         1kv3C02 C:148-470 Coagulation Factor XIII, subunit A, domain 2                                                                                                                                                                                                                                                                     1kv3C03 C:471-587 Immunoglobulins                                                                                    1kv3C04 C:588-685 Immunoglobulins                                                                 -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh........eeee...eeeee.------------..eeeee...........eeeee..........eeeeee......eeeee.......eeeeeee...----------.eeeee.............hhhhhhhhh...eeeeeeee..eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eee..........hhhhh..hhhhhhhhhh.....eeeehhhhhhhhhhhhhhhh...eeeeeeeee........eeeeee..............eeeeeeeeeee..........eeeeeeeeeeee..eeeeeeeeehhhhhhh......hhhhhhhhhhheeeeeee.....eee.ee.........eee......eeehhhhhh....hhhhhhhhhhh.............eeeeee..........eeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeeeee...eeeeeeeeehhhhhh.......eeeeeeeeee....eeeeeeeeee......eeeee........eeeeeeee..........eeeee........eeee.........eeeeeeee.......eeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------H-----------------------------------------------------------------------------------------------------------------------------------------H-------------------------------------------------------------------------------------------------------------R-----RN--------------------------------------------------------------------------------------------------------W---------------------------------------------------------------------------------------------------S---------------------------------------------------------------------------------------------------------------------------V--------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSGLUTAMINASES ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: C:15-64 (gaps) UniProt: 4-64      --------------------------------------------------------------------------------Exon 1.5b  PDB: C:145-184               Exon 1.6  PDB: C:185-227 UniProt: 185-227  Exon 1.7b  PDB: C:228-287 UniProt: 228-287                  -------------------------------------------------------------------------------Exon 1.10  PDB: C:367-448 UniProt: 367-448                                        ------------------------------------------------------------------------------------------Exon 1.12b  PDB: C:539-592 UniProt: 539-592           Exon 1.13b  PDB: C:593-638 UniProt: 593-638   ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.4a  PDB: C:64-145 (gaps) UniProt: 64-145                                   ---------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: C:287-332 UniProt: 287-332     -------------------------------------------------------------------------------------------------------------------Exon 1.11a  PDB: C:448-539 UniProt: 448-539                                                 --------------------------------------------------------------------------------------------------Exon 1.14a  PDB: C:638-687 UniProt: 638-687        Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: C:332-367            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1kv3 C  15 ETNGRDHHTADLCREKLVVRRGQPFWLTL------------SLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEAS----------GHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
                                    24        34        |-         - |      64        74        84        94       104       114       | -       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
                                                       43           56                                                               122        133                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          


Chain D from PDB  Type:PROTEIN  Length:651
 aligned with TGM2_HUMAN | P21980 from UniProtKB/Swiss-Prot  Length:687

    Alignment length:673
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
           TGM2_HUMAN    15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
               SCOP domains d1kv3d1 D:15-145 Transglutami            nase N-terminal domain                                                                    d1kv3d4 D:146-468 Transglutaminase catalytic domain                                                                                                                                                                                                                                                                                d1kv3d2 D:469-585 Transglutaminase, two C-terminal domains                                                           d1kv3d3 D:586-687 Transglutaminase, two C-terminal domains                                             SCOP domains
               CATH domains 1kv3D01 D:15-147 Immunoglobul            ins                                                                                         1kv3D02 D:148-470 Coagulation Factor XIII, subunit A, domain 2                                                                                                                                                                                                                                                                     1kv3D03 D:471-587 Immunoglobulins                                                                                    1kv3D04 D:588-685 Immunoglobulins                                                                 -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh........eeee...eeeee.------------..eeeee...........eeeee..........eeeeee......eeeee.......eeeeeee...----------.eeeee.............hhhhhhhhh...eeeeeeee..eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eee..........hhhhh..hhhhhhhhhh.....eeeehhhhhhhhhhhhhhhh...eeeeeeeee........eeeeee..............eeeeeeeeeee..........eeeeeeeeeeee..eeeeeeeeehhhhhhh......hhhhhhhhhhheeeeeee.....eee.ee.........eee......eeehhhhhh....hhhhhhhhhhh.............eeeeee..........eeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeeeee...eeeeeeeeehhhhhh.......eeeeeeeeee....eeeeeeeeee......eeeee........eeeeeeee..........eeeee........eeee.........eeeeeeee.......eeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------H-----------------------------------------------------------------------------------------------------------------------------------------H-------------------------------------------------------------------------------------------------------------R-----RN--------------------------------------------------------------------------------------------------------W---------------------------------------------------------------------------------------------------S---------------------------------------------------------------------------------------------------------------------------V--------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSGLUTAMINASES ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: D:15-64 (gaps) UniProt: 4-64      --------------------------------------------------------------------------------Exon 1.5b  PDB: D:145-184               Exon 1.6  PDB: D:185-227 UniProt: 185-227  Exon 1.7b  PDB: D:228-287 UniProt: 228-287                  -------------------------------------------------------------------------------Exon 1.10  PDB: D:367-448 UniProt: 367-448                                        ------------------------------------------------------------------------------------------Exon 1.12b  PDB: D:539-592 UniProt: 539-592           Exon 1.13b  PDB: D:593-638 UniProt: 593-638   ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.4a  PDB: D:64-145 (gaps) UniProt: 64-145                                   ---------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: D:287-332 UniProt: 287-332     -------------------------------------------------------------------------------------------------------------------Exon 1.11a  PDB: D:448-539 UniProt: 448-539                                                 --------------------------------------------------------------------------------------------------Exon 1.14a  PDB: D:638-687 UniProt: 638-687        Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: D:332-367            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1kv3 D  15 ETNGRDHHTADLCREKLVVRRGQPFWLTL------------SLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEAS----------GHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
                                    24        34        |-         - |      64        74        84        94       104       114       | -       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
                                                       43           56                                                               122        133                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          


Chain E from PDB  Type:PROTEIN  Length:651
 aligned with TGM2_HUMAN | P21980 from UniProtKB/Swiss-Prot  Length:687

    Alignment length:673
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
           TGM2_HUMAN    15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
               SCOP domains d1kv3e1 E:15-145 Transglutami            nase N-terminal domain                                                                    d1kv3e4 E:146-468 Transglutaminase catalytic domain                                                                                                                                                                                                                                                                                d1kv3e2 E:469-585 Transglutaminase, two C-terminal domains                                                           d1kv3e3 E:586-687 Transglutaminase, two C-terminal domains                                             SCOP domains
               CATH domains 1kv3E01 E:15-147 Immunoglobul            ins                                                                                         1kv3E02 E:148-470 Coagulation Factor XIII, subunit A, domain 2                                                                                                                                                                                                                                                                     1kv3E03 E:471-587 Immunoglobulins                                                                                    1kv3E04 E:588-685 Immunoglobulins                                                                 -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh........eeee...eeeee.------------..eeeee...........eeeee..........eeeeee......eeeee.......eeeeeee...----------.eeeee.............hhhhhhhhh...eeeeeeee..eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eee.................hhhhhhhhhh.....eeeehhhhhhhhhhhhhhhh...eeeeeeeee........eeeeee..............eeeeeeeeeee..........eeeeeeeeeeee..eeeeeeeeehhhhhhh......hhhhhhhhhhheeeeeee.....eee.ee.........eee......eeehhhhhh....hhhhhhhhhhh.............eeeeee..........eeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeeeee...eeeeeeeeehhhhhh.......eeeeeeeeee....eeeeeeeeee......eeeee........eeeeeeee..........eeeee........eeee.........eeeeeeee.......eeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------H-----------------------------------------------------------------------------------------------------------------------------------------H-------------------------------------------------------------------------------------------------------------R-----RN--------------------------------------------------------------------------------------------------------W---------------------------------------------------------------------------------------------------S---------------------------------------------------------------------------------------------------------------------------V--------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSGLUTAMINASES ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: E:15-64 (gaps) UniProt: 4-64      --------------------------------------------------------------------------------Exon 1.5b  PDB: E:145-184               Exon 1.6  PDB: E:185-227 UniProt: 185-227  Exon 1.7b  PDB: E:228-287 UniProt: 228-287                  -------------------------------------------------------------------------------Exon 1.10  PDB: E:367-448 UniProt: 367-448                                        ------------------------------------------------------------------------------------------Exon 1.12b  PDB: E:539-592 UniProt: 539-592           Exon 1.13b  PDB: E:593-638 UniProt: 593-638   ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.4a  PDB: E:64-145 (gaps) UniProt: 64-145                                   ---------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: E:287-332 UniProt: 287-332     -------------------------------------------------------------------------------------------------------------------Exon 1.11a  PDB: E:448-539 UniProt: 448-539                                                 --------------------------------------------------------------------------------------------------Exon 1.14a  PDB: E:638-687 UniProt: 638-687        Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: E:332-367            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1kv3 E  15 ETNGRDHHTADLCREKLVVRRGQPFWLTL------------SLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEAS----------GHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
                                    24        34        |-         - |      64        74        84        94       104       114       | -       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
                                                       43           56                                                               122        133                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          


Chain F from PDB  Type:PROTEIN  Length:651
 aligned with TGM2_HUMAN | P21980 from UniProtKB/Swiss-Prot  Length:687

    Alignment length:673
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
           TGM2_HUMAN    15 ETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTGYQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
               SCOP domains d1kv3f1 F:15-145 Transglutami            nase N-terminal domain                                                                    d1kv3f4 F:146-468 Transglutaminase catalytic domain                                                                                                                                                                                                                                                                                d1kv3f2 F:469-585 Transglutaminase, two C-terminal domains                                                           d1kv3f3 F:586-687 Transglutaminase, two C-terminal domains                                             SCOP domains
               CATH domains 1kv3F01 F:15-147 Immunoglobul            ins                                                                                         1kv3F02 F:148-470 Coagulation Factor XIII, subunit A, domain 2                                                                                                                                                                                                                                                                     1kv3F03 F:471-587 Immunoglobulins                                                                                    1kv3F04 F:588-685 Immunoglobulins                                                                 -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhh........eeee...eeeee.------------..eeeee...........eeeee..........eeeeee......eeeee.......eeeeeee...----------.eeeee.............hhhhhhhhh...eeeeeeee..eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.......eee..........hhhhh..hhhhhhhhhh.....eeeehhhhhhhhhhhhhhhh...eeeeeeeee........eeeeee..............eeeeeeeeeee..........eeeeeeeeeeee..eeeeeeeeehhhhhhh......hhhhhhhhhhheeeeeee.....eee.ee.........eee......eeehhhhhh....hhhhhhhhhhh...........................................eeeeeeeeeeee.....eeeeeeeeeeeeeee............hhhhhh.......eeeeeeeeee....eeeeeeeeee......eeeee........eeeeeeee..........eeeee........eeee.........eeeeeeee.......eeeeeeee......eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------H-----------------------------------------------------------------------------------------------------------------------------------------H-------------------------------------------------------------------------------------------------------------R-----RN--------------------------------------------------------------------------------------------------------W---------------------------------------------------------------------------------------------------S---------------------------------------------------------------------------------------------------------------------------V--------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRANSGLUTAMINASES ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3b  PDB: F:15-64 (gaps) UniProt: 4-64      --------------------------------------------------------------------------------Exon 1.5b  PDB: F:145-184               Exon 1.6  PDB: F:185-227 UniProt: 185-227  Exon 1.7b  PDB: F:228-287 UniProt: 228-287                  -------------------------------------------------------------------------------Exon 1.10  PDB: F:367-448 UniProt: 367-448                                        ------------------------------------------------------------------------------------------Exon 1.12b  PDB: F:539-592 UniProt: 539-592           Exon 1.13b  PDB: F:593-638 UniProt: 593-638   ------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------Exon 1.4a  PDB: F:64-145 (gaps) UniProt: 64-145                                   ---------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: F:287-332 UniProt: 287-332     -------------------------------------------------------------------------------------------------------------------Exon 1.11a  PDB: F:448-539 UniProt: 448-539                                                 --------------------------------------------------------------------------------------------------Exon 1.14a  PDB: F:638-687 UniProt: 638-687        Transcript 1 (2)
           Transcript 1 (3) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: F:332-367            -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 1kv3 F  15 ETNGRDHHTADLCREKLVVRRGQPFWLTL------------SLTFSVVTGPAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEAS----------GHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSVHKSINRSLIVGLKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLAEKEETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLKAVKGFRNVIIGPA 687
                                    24        34        |-         - |      64        74        84        94       104       114       | -       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684   
                                                       43           56                                                               122        133
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (3, 24)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (2, 24)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)
(-)
Architecture: Sandwich (5577)
(-)
Topology: Immunoglobulin-like (3897)
(-)
Homologous Superfamily: Immunoglobulins (2282)
(-)
Human (Homo sapiens) (912)
2a1kv3A04A:588-685
2b1kv3B04B:588-685
2c1kv3C04C:588-685
2d1kv3D04D:588-685
2e1kv3E04E:588-685
2f1kv3F04F:588-685
2g1kv3A01A:15-147
2h1kv3B01B:15-147
2i1kv3C01C:15-147
2j1kv3D01D:15-147
2k1kv3E01E:15-147
2l1kv3F01F:15-147
2m1kv3A03A:471-587
2n1kv3B03B:471-587
2o1kv3C03C:471-587
2p1kv3D03D:471-587
2q1kv3E03E:471-587
2r1kv3F03F:471-587

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1KV3)

(-) Gene Ontology  (21, 21)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (TGM2_HUMAN | P21980)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0003810    protein-glutamine gamma-glutamyltransferase activity    Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
    GO:0016746    transferase activity, transferring acyl groups    Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
    GO:0043277    apoptotic cell clearance    The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.
    GO:0060445    branching involved in salivary gland morphogenesis    The process in which the branching structure of the salivary gland is generated and organized.
    GO:0032471    negative regulation of endoplasmic reticulum calcium ion concentration    Any process that decreases the concentration of calcium ions in the endoplasmic reticulum.
    GO:0018149    peptide cross-linking    The formation of a covalent cross-link between or within protein chains.
    GO:0007200    phospholipase C-activating G-protein coupled receptor signaling pathway    The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, where the pathway proceeds with activation of phospholipase C (PLC) and a subsequent increase in the concentration of inositol trisphosphate (IP3) and diacylglycerol (DAG).
    GO:0043065    positive regulation of apoptotic process    Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
    GO:0045785    positive regulation of cell adhesion    Any process that activates or increases the frequency, rate or extent of cell adhesion.
    GO:0051561    positive regulation of mitochondrial calcium ion concentration    Any process that increases the concentration of calcium ions in mitochondria.
    GO:0060662    salivary gland cavitation    The process in which the solid core of salivary epithelium gives rise to the hollow tube of the gland.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0031226    intrinsic component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

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  2.3.2.13
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TGM2_HUMAN | P21980: 1fau 2q3z 3ly6 3s3j 3s3p 3s3s 4pyg

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1KV3)