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(-) Description

Title :  MOLECULAR BASIS OF MITOMYCIN C RESICTANCE IN STREPTOMYCES: CRYSTAL STRUCTURES OF THE MRD PROTEIN WITH AND WITHOUT A DRUG DERIVATIVE
 
Authors :  T. W. Martin, Z. Dauter, Y. Devedjiev, P. Sheffield, F. Jelen, M. He, D. S J. Otlewski, Z. S. Derewenda, U. Derewenda
Date :  17 Dec 01  (Deposition) - 19 Jul 02  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  A  (2x)
Keywords :  Mitomycin C, Antibiotic Resistance, Sad, Anomalous Diffraction, Domain Swapping, P-Staking, Antimicrobial Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. W. Martin, Z. Dauter, Y. Devedjiev, P. Sheffield, F. Jelen, M. He, D. H. Sherman, J. Otlewski, Z. S. Derewenda, U. Derewenda
Molecular Basis Of Mitomycin C Resistance In Streptomyces: Structure And Function Of The Mrd Protein.
Structure V. 10 933 2002
PubMed-ID: 12121648  |  Reference-DOI: 10.1016/S0969-2126(02)00778-5

(-) Compounds

Molecule 1 - MITOMYCIN-BINDING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL221(DE3)
    Expression System Taxid: 562
    Expression System Vector: PHIS PARALELL I
    Organism Scientific: STREPTOMYCES LAVENDULAE
    Organism Taxid: 1914
    Synonym: MRD;
MITOMYCIN RESISTANCE PROTEIN D

 Structural Features

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  1
Asymmetric Unit : A
Biological Unit 1 (2x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:125
 aligned with O05205_STRLA | O05205 from UniProtKB/TrEMBL  Length:130

    Alignment length:128
                                    12        22        32        42        52        62        72        82        92       102       112       122        
         O05205_STRLA     3 ARISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP 130
               SCOP domains d1kmza_ A: Mitomycin resistance protein D, MRD                                                                                   SCOP domains
               CATH domains 1kmzA00 A:3-130 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1                                                                  CATH domains
               Pfam domains -Glyoxalase-1kmzA01 A:4-125                                                                                                ----- Pfam domains
         Sec.struct. author .eeeeeeeee.hhhhhhhhhhhh......hhhhh.eeeee.hhh.eeeeeehhhhhhhh.....---...eeeeee..hhhhhhhhhhhhhhh..eeeeeeee....eeeeeee.....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1kmz A   3 ARISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQA---GHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP 130
                                    12        22        32        42        52        62   |   |72        82        92       102       112       122        
                                                                                          66  70
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

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Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

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Clan: Glyoxalase (58)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        O05205_STRLA | O05205: 1kll 2a4w 2a4x

(-) Related Entries Specified in the PDB File

1kll THE SAME PROTEIN COMPLEXED WITH MITOMYCIN C DERIVATIVE