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Title :  MODELLING OF THE THREE-DIMENSIONAL ARCHITECTURE OF GROUP I CATALYTIC INTRONS BASED ON COMPARATIVE SEQUENCE ANALYSIS
 
Authors :  F. Michel, E. Westhof
Date :  07 May 91  (Deposition) - 31 Jan 94  (Release) - 31 Jan 94  (Revision)
Method :  THEORETICAL MODEL
Resolution :  NOT APPLICABLE
Chains :  Theor. Model :  A,B,C,D,E,F,G
Keywords :  Intron (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Michel, E. Westhof
Modelling Of The Three-Dimensional Architecture Of Group I Catalytic Introns Based On Comparative Sequence Analysis.
J. Mol. Biol. V. 216 585 1990
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - RNA (5'-R(P*UP*CP*UP*CP*U)-3')
    Chains: A
    Engineered: YES
    Synthetic: YES
 
Molecule 2 - RNA (5'- R(P*UP*AP*CP*CP*UP*UP*UP*GP*GP*AP*GP*GP*A)-3')
    Chains: B
    Engineered: YES
    Synthetic: YES
 
Molecule 3 - RNA (5'- R(P*GP*AP*CP*CP*GP*UP*CP*AP*AP*AP*UP*UP*GP*CP*GP*GP*GP*AP*A P*AP*GP*G)-3')
    Chains: C
    Engineered: YES
    Synthetic: YES
 
Molecule 4 - RNA (5'- R(P*CP*UP*AP*AP*CP*CP*AP*CP*GP*CP*AP*GP*CP*CP*AP*AP*GP*U)- 3')
    Chains: D
    Engineered: YES
    Synthetic: YES
 
Molecule 5 - RNA (31-MER)
    Chains: E
    Engineered: YES
    Synthetic: YES
 
Molecule 6 - RNA (5'- R(P*CP*UP*CP*AP*UP*AP*AP*GP*AP*UP*AP*UP*AP*GP*UP*CP*GP*GP*A )-3')
    Chains: F
    Engineered: YES
    Synthetic: YES
 
Molecule 7 - RNA (5'-R(P*UP*CP*GP*UP*AP*AP*GP*GP*UP*A)-3')
    Chains: G
    Engineered: YES
    Synthetic: YES

 Structural Features

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Theoretical Model : 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Theoretical Model
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:RNA  Length:5
                                     
                 1ipt A   2 UCUCU   6


Chain B from PDB  Type:RNA  Length:13
                                             
                 1ipt B  15 UACCUUUGGAGGA  28
                                    24 ||
                                      26|
                                       28


Chain C from PDB  Type:RNA  Length:22
                                                      
                 1ipt C  96 GACCGUCAAAUUGCGGGAAAGG 117
                                   105       115  


Chain D from PDB  Type:RNA  Length:18
                                                  
                 1ipt D 204 CUAACCACGCAGCCAAGU 221
                                   213        


Chain E from PDB  Type:RNA  Length:31
                                                               
                 1ipt E 252 AUGCAGUUCACAGACUAAAUGUCGGUCGGGG 282
                                   261       271       281 


Chain F from PDB  Type:RNA  Length:19
                                                   
                 1ipt F 296 CUCAUAAGAUAUAGUCGGA 314
                                   305         


Chain G from PDB  Type:RNA  Length:10
                                          
                 1ipt G 412 UCGUAAGGUA 421
                                   421
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 Related Entries

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