1GNV - JenaLib

Asymmetric/Biological Unit

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	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:266
 aligned with SUBT_BACAM | P00782 from UniProtKB/Swiss-Prot  Length:382

    Alignment length:275
                                   117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377     
           SUBT_BACAM   108 AQSVPYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAGGASMVPSETNPFQDNNSHGTHVAGTVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPSGSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGPELDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLINVQAAAQ 382
               SCOP domains d1gnva_ A: Subtilisin                                                                                                                                                                                                                                                               SCOP domains
               CATH domains 1gnvA00 A:1-275  [code=3.40.50.200, no name defined]                                                                                                                                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhh......eeeeee.............eeee.............hhhhhhhhhhhh---------hh...eeeeee........hhhhhhhhhhhhhhh...eeee.......hhhhhhhhhhhhhh..eeeee......................eeeeee.................eeee...eeeee...eeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh.....hhhhhh....hhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------F-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------SUBTILASE_AS------------------------SUBTILASE_H------------------------------------------------------------------------------------------------------------------------------------------------SUBTILASE_S---------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gnv A   1 AKCVSYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLNVAGGASFVPSETNPFQDNNSHGTHVAGTVLA---------VAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPSGSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGPELDVMAPGVSICSTLPGNKYGAKSGTsMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLINVEAAAQ 275
                                    10        20        30        40        50        60        70   |     -   |    90       100       110       120       130       140       150       160       170       180       190       200       210       220|      230       240       250       260       270     
                                                                                                    74        84                                                                                                                                      221-MIS

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (SUBT_BACAM | P00782)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004252	serine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
	GO:0008236	serine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
	GO:0042730	fibrinolysis	A process that solubilizes fibrin in the bloodstream of a multicellular organism, chiefly by the proteolytic action of plasmin.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
	GO:0030435	sporulation resulting in formation of a cellular spore	The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.
cellular component
	GO:0005575	cellular_component	The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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Asymmetric/Biological Unit
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	Sites
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	Cis Peptide Bonds
		Tyr A:167 - Pro A:168	[ RasMol ]

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Databases

Access by PDB/NDB ID
	1gnv
		Family and Domain Information	:	ProDom \| SYSTERS
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
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		Structure Classification	:	CATH \| Dali \| SCOP
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Access by UniProt ID/Accession number
	SUBT_BACAM \| P00782
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	3.4.21.62
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

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		Disease Information	:	OMIM

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		Age Related Information	:	GenAge

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

1a2q	SUBTILISIN BPN' MUTANT 7186
1ak9	SUBTILISIN MUTANT 8321
1aqn	SUBTILISIN MUTANT 8324
1au9	SUBTILISIN BPN' MUTANT 8324 IN CITRATE
1gns	SUBTILISIN BPN' (MUTANT: D142A, M151F, A174L, Q307W, Y318K, N319S, S322C, Q372E, DELETION, RESIDUES 176-185)
1s01	SUBTILISIN BPN' 8350 (MUTANT: M50F, N76D, G169A, Q206C, Y217K, AND N218S) IN EDTA
1s02	SUBTILISIN BPN' (MUTANT: Q19E, Q271E)
1sbh	SUBTILISIN BPN' 8397+1 (MUTANT: M50F, N76D, G169A, Q206C, N218S, K256Y)
1sbi	SUBTILISIN BPN' 8397 (MUTANT: M50F, N76D, G169A, Q206C, N218S)
1sbn	SUBTILISIN NOVO BPN' COMPLEX WITH EGLIN C (MUTANT: L45R)
1sbt	SUBTILISIN BPN
1sib	SUBTILISIN NOVO (BPN') COMPLEX WITH EGLIN C (MUTANT: R53K)
1spb	SUBTILISIN BPN' PROSEGMENT (77 RESIDUES) COMPLEXED WITH A MUTANT SUBTILISIN BPN' (266 RESIDUES). CRYSTAL PH 4.6. CRYSTALLIZATION TEMPERATURE 20 C DIFFRACTION TEMPERATURE -160C
1st2	SUBTILISIN BPN' (BASOX) - PEROXIDE INACTIVATED
1sua	SUBTILISIN BPN'
1sub	SUBTILISIN BPN' CRB-S3 (MUTANT: N218S,S221C)
1suc	SUBTILISIN BPN' CRB-S3 (MUTANT: M50P,Y217K, N218S,S221C AND RESIDUES 75-83 DELETED)
1sud	SUBTILISIN BPN' CRB-S3 (MUTANT: M50P,Y217K, N218S,S221C)
1sue	SUBTILISIN BPN' FROM BACILLUS AMYLOLIQUEFACIENS, MUTANT
1sup	MOL_ID: 1; MOLECULE: SUBTILISIN BPN'
1ubn	SELENOSUBTILISIN BPN
1yja	SUBTILISIN BPN' 8397+1 (MUTANT: M50F, N76D, G169A, Q206C, N218S, AND K256Y)
1yjb	SUBTILISIN BPN' 8397+1 (MUTANT: M50F, N76D, G169A, Q206C, N218S, AND K256Y)
1yjc	SUBTILISIN BPN' 8397+1 (MUTANT: M50F N76D, G169A, E206C, N218S, K256Y)
2sbt	SUBTILISIN NOVO
2sic	SUBTILISIN BPN' COMPLEX WITH STREPTOMYCES SUBTILISIN INHIBITOR
2sni	SUBTILISIN NOVO COMPLEX WITH CHYMOTRYPSIN INHIBITOR 2 (CI-2)
2st1	SUBTILISIN BPN' (BAS)
3sic	SUBTILISIN BPN' COMPLEX WITH A MODIFIED SSI (STREPTOMYCES SUBTILISIN INHIBITOR) M73K (SSI(M73K))
5sic	SUBTILISIN BPN' COMPLEX WITH STREPTOMYCES SUBTILISIN INHIBITOR MUTANT M70G, M73K (SSI(M70G,M73K))

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Sites (0, 0)

SS Bonds (1, 1)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 1)

PROSITE Motifs (3, 3)

Exons (0, 0)

Sequences/Alignments