1G7Y - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   THE CRYSTAL STRUCTURE OF THE 58KD VEGETATIVE LECTIN FROM THE TROPICAL LEGUME DOLICHOS BIFLORUS

Authors :   L. Buts, T. W. Hamelryck, R. Loris, M. -H. Dao-Thi, L. Wyns, M. E. Etzler

Date :   15 Nov 00 (Deposition) - 29 Nov 00 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)

Keywords :   Jelly Roll Fold, Lectin, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. Buts, M. H. Dao-Thi, R. Loris, L. Wyns, M. Etzler, T. Hamelryck
Weak Protein-Protein Interactions In Lectins: The Crystal Structure Of A Vegetative Lectin From The Legume Dolichos Biflorus.
J. Mol. Biol. V. 309 193 2001
PubMed-ID: 11491289 | Reference-DOI: 10.1006/JMBI.2001.4639
(for further references see the PDB file header)

Molecule 1 - STEM/LEAF LECTIN DB58
	Chains	:	A, B, C, D, E, F
	Organism Common	:	HORSE GRAM
	Organism Scientific	:	VIGNA UNGUICULATA SUBSP. CYLINDRICA
	Organism Taxid	:	3840
	Other Details	:	TROPICAL LEGUME
	Strain	:	SUBSP. CYLINDRICA

		1	2	3	4	5	6
Asymmetric Unit	:	A	B	C	D	E	F
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 21)

No.	Name	Count	Type	Full Name
1	CA	6	Ligand/Ion	CALCIUM ION
2	FUC	2	Ligand/Ion	ALPHA-L-FUCOSE
3	FUL	1	Ligand/Ion	BETA-L-FUCOSE
4	MN	6	Ligand/Ion	MANGANESE (II) ION
5	NAG	6	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 1 (2, 3)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	FUC	1	Ligand/Ion	ALPHA-L-FUCOSE
3	FUL	-1	Ligand/Ion	BETA-L-FUCOSE
4	MN	-1	Ligand/Ion	MANGANESE (II) ION
5	NAG	2	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	FUC	-1	Ligand/Ion	ALPHA-L-FUCOSE
3	FUL	1	Ligand/Ion	BETA-L-FUCOSE
4	MN	-1	Ligand/Ion	MANGANESE (II) ION
5	NAG	2	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 3 (2, 3)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	FUC	1	Ligand/Ion	ALPHA-L-FUCOSE
3	FUL	-1	Ligand/Ion	BETA-L-FUCOSE
4	MN	-1	Ligand/Ion	MANGANESE (II) ION
5	NAG	2	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (21, 21)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN B:79 , FUC B:261 , NAG B:262 , ASP E:131	BINDING SITE FOR RESIDUE NAG B 260
02	AC2	SOFTWARE	NAG B:260 , NAG B:262	BINDING SITE FOR RESIDUE FUC B 261
03	AC3	SOFTWARE	NAG B:260 , FUC B:261 , ASP E:111 , ASP E:131	BINDING SITE FOR RESIDUE NAG B 262
04	AC4	SOFTWARE	ASN C:79 , SER C:82 , TYR C:218 , FUL C:261 , NAG C:262	BINDING SITE FOR RESIDUE NAG C 260
05	AC5	SOFTWARE	NAG C:260 , NAG C:262	BINDING SITE FOR RESIDUE FUL C 261
06	AC6	SOFTWARE	NAG C:260 , FUL C:261	BINDING SITE FOR RESIDUE NAG C 262
07	AC7	SOFTWARE	TYR C:113 , ASP C:114 , ASN E:79 , SER E:81 , SER E:82 , TYR E:218 , FUC E:261 , NAG E:262	BINDING SITE FOR RESIDUE NAG E 260
08	AC8	SOFTWARE	ASP C:114 , SER C:116 , NAG E:260 , NAG E:262	BINDING SITE FOR RESIDUE FUC E 261
09	AC9	SOFTWARE	SER C:116 , NAG E:260 , FUC E:261	BINDING SITE FOR RESIDUE NAG E 262
10	BC1	SOFTWARE	ASP A:125 , PHE A:127 , ASN A:129 , ASP A:133 , HOH A:1255 , HOH A:1256	BINDING SITE FOR RESIDUE CA A 254
11	BC2	SOFTWARE	GLU A:123 , ASP A:125 , ASP A:133 , HIS A:138 , HOH A:1257 , HOH A:1258	BINDING SITE FOR RESIDUE MN A 257
12	BC3	SOFTWARE	ASP B:125 , PHE B:127 , ASN B:129 , ASP B:133 , HOH B:2255 , HOH B:2256	BINDING SITE FOR RESIDUE CA B 254
13	BC4	SOFTWARE	GLU B:123 , ASP B:125 , ASP B:133 , HIS B:138 , HOH B:2257 , HOH B:2258	BINDING SITE FOR RESIDUE MN B 257
14	BC5	SOFTWARE	ASP C:125 , PHE C:127 , ASN C:129 , ASP C:133 , HOH C:3255 , HOH C:3256	BINDING SITE FOR RESIDUE CA C 254
15	BC6	SOFTWARE	GLU C:123 , ASP C:125 , ASP C:133 , HIS C:138 , HOH C:3257 , HOH C:3258	BINDING SITE FOR RESIDUE MN C 257
16	BC7	SOFTWARE	ASP D:125 , PHE D:127 , ASN D:129 , ASP D:133 , HOH D:4255 , HOH D:4256	BINDING SITE FOR RESIDUE CA D 254
17	BC8	SOFTWARE	GLU D:123 , ASP D:125 , ASP D:133 , HIS D:138 , HOH D:4257 , HOH D:4258	BINDING SITE FOR RESIDUE MN D 257
18	BC9	SOFTWARE	ASP E:125 , PHE E:127 , ASN E:129 , ASP E:133 , HOH E:5255 , HOH E:5256	BINDING SITE FOR RESIDUE CA E 254
19	CC1	SOFTWARE	GLU E:123 , ASP E:125 , ASP E:133 , HIS E:138 , HOH E:5257 , HOH E:5258	BINDING SITE FOR RESIDUE MN E 257
20	CC2	SOFTWARE	ASP F:125 , PHE F:127 , ASN F:129 , ASP F:133 , HOH F:6255 , HOH F:6256	BINDING SITE FOR RESIDUE CA F 254
21	CC3	SOFTWARE	GLU F:123 , ASP F:125 , ASP F:133 , HIS F:138 , HOH F:6257 , HOH F:6258	BINDING SITE FOR RESIDUE MN F 257

(no "SS Bond" information available for 1G7Y)

Asymmetric Unit

No.	Residues
1	Ala A:84	-	Asp A:85
2	Ala B:84	-	Asp B:85
3	Ala C:84	-	Asp C:85
4	Ala D:84	-	Asp D:85
5	Ala E:84	-	Asp E:85
6	Ala F:84	-	Asp F:85

(no "SAP(SNP)/Variant" information available for 1G7Y)

Asymmetric Unit (2, 12)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LECTIN_LEGUME_BETA	PS00307	Legume lectins beta-chain signature.	LEC5_VIGUC	142-148	6	A:120-126 B:120-126 C:120-126 D:120-126 E:120-126 F:120-126
2	LECTIN_LEGUME_ALPHA	PS00308	Legume lectins alpha-chain signature.	LEC5_VIGUC	222-231	6	A:200-209 B:200-209 C:200-209 D:200-209 E:200-209 F:200-209

Biological Unit 1 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LECTIN_LEGUME_BETA	PS00307	Legume lectins beta-chain signature.	LEC5_VIGUC	142-148	2	A:120-126 B:120-126 - - - -
2	LECTIN_LEGUME_ALPHA	PS00308	Legume lectins alpha-chain signature.	LEC5_VIGUC	222-231	2	A:200-209 B:200-209 - - - -

Biological Unit 2 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LECTIN_LEGUME_BETA	PS00307	Legume lectins beta-chain signature.	LEC5_VIGUC	142-148	2	- - C:120-126 D:120-126 - -
2	LECTIN_LEGUME_ALPHA	PS00308	Legume lectins alpha-chain signature.	LEC5_VIGUC	222-231	2	- - C:200-209 D:200-209 - -

Biological Unit 3 (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	LECTIN_LEGUME_BETA	PS00307	Legume lectins beta-chain signature.	LEC5_VIGUC	142-148	2	- - - - E:120-126 F:120-126
2	LECTIN_LEGUME_ALPHA	PS00308	Legume lectins alpha-chain signature.	LEC5_VIGUC	222-231	2	- - - - E:200-209 F:200-209

(no "Exon" information available for 1G7Y)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:251
 aligned with LEC5_VIGUC | P19588 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:253
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272   
           LEC5_VIGUC    23 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 275
               SCOP domains d1g7ya_ A: Legume lectin                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1g7yA00 A:1-253  [code=2.60.120.200, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeee..eee..eee..............eeeeee...ee..........eeeeeeeee....hhhhh..eeeeeeee.......hhhhh........hhhhh.eeeeee............eeeeee......eeee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh..eeeeeeeee...........eeeeeeeeeee....--..eehhhhhhheee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG-------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g7y A   1 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDS--EPLDIASYLVRNVL 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230      |240       250   
                                                                                                                                                                                                                                                                      237  |             
                                                                                                                                                                                                                                                                         240

Chain B from PDB  Type:PROTEIN  Length:246
 aligned with LEC5_VIGUC | P19588 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:253
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272   
           LEC5_VIGUC    23 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 275
               SCOP domains d1g7yb_ B: Legume lectin                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1g7yB00 B:1-253  [code=2.60.120.200, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeee..eee..eee..............eeeeee...ee..........eeeeeeeee....hhhhh..eeeeeeee.......hhhhh........hhhhh.eeeeee............eeeeee......eeee.......eeeeeeeee....eeeeeee......eeeeeee.hhhhhh..eeeeeeeee...........eeeeeeeeeee.-------.hhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG-------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g7y B   1 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLP-------LDIASYLVRNVL 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230   |     - |     250   
                                                                                                                                                                                                                                                                   234     242

Chain C from PDB  Type:PROTEIN  Length:251
 aligned with LEC5_VIGUC | P19588 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:253
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272   
           LEC5_VIGUC    23 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 275
               SCOP domains d1g7yc_ C: Legume lectin                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1g7yC00 C:1-253  [code=2.60.120.200, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeee..eee..eee..............eeeeee...ee..........eeeeeeeee....hhhhh..eeeeeeee.......hhhhh........hhhhh.eeeeee............eeeeee......eeee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh..eeeeeeeee...........eeeeeeeeeee....--..eehhhhhhheee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG-------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g7y C   1 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDS--EPLDIASYLVRNVL 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230      |240       250   
                                                                                                                                                                                                                                                                      237  |             
                                                                                                                                                                                                                                                                         240

Chain D from PDB  Type:PROTEIN  Length:253
 aligned with LEC5_VIGUC | P19588 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:253
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272   
           LEC5_VIGUC    23 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 275
               SCOP domains d1g7yd_ D: Legume lectin                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1g7yD00 D:1-253  [code=2.60.120.200, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeee..eee..eee..............eeeeee...ee..........eeeeeeeee....hhhhh..eeeeeeee.......hhhhh........hhhhh.eeeeee............eeeeee......eeee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh..eeeeeeeee...........eeeeeeeeeee.........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG-------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g7y D   1 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250

Chain E from PDB  Type:PROTEIN  Length:249
 aligned with LEC5_VIGUC | P19588 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:253
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272   
           LEC5_VIGUC    23 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 275
               SCOP domains d1g7ye_ E: Legume lectin                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1g7yE00 E:1-253  [code=2.60.120.200, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeee..eee..eee..............eeeeee...ee..........eeeeeeeee....hhhhh..eeeeeeee.......hhhhh........hhhhh.eeeeee............eeeeee......eeee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh..eeeeeeeee...........eeeeeeeeeee....----.hhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG-------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g7y E   1 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDS----LDIASYLVRNVL 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230      |  - |     250   
                                                                                                                                                                                                                                                                      237  242

Chain F from PDB  Type:PROTEIN  Length:246
 aligned with LEC5_VIGUC | P19588 from UniProtKB/Swiss-Prot  Length:275

    Alignment length:253
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272   
           LEC5_VIGUC    23 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLPDDSTTEPLDIASYLVRNVL 275
               SCOP domains d1g7yf_ F: Legume lectin                                                                                                                                                                                                                                      SCOP domains
               CATH domains 1g7yF00 F:1-253  [code=2.60.120.200, no name defined]                                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.......eeeee..eee..eee..............eeeeee...ee..........eeeeeeeee....hhhhh.eeeeeeeee.......hhhhh........hhhhh.eeeeee............eeeeee......eeee.......eeeeeeeee....eeeeeeee....eeeeeeee.hhhhhh..eeeeeeeeee..........eeeeeeeeeee.-------.hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------LECTIN_-------------------------------------------------------------------------LECTIN_LEG-------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1g7y F   1 ADIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASKLP-------LDIASYLVRNVL 253
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230   |     - |     250   
                                                                                                                                                                                                                                                                   234     242

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Concanavalin A-like lectins/glucanases (797)

Superfamily: Concanavalin A-like lectins/glucanases (797)

Family: Legume lectins (238)

Protein domain: Legume lectin (110)

Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840] (5)

1a	d1g7ya_	A:
1b	d1g7yb_	B:
1c	d1g7yc_	C:
1d	d1g7yd_	D:
1e	d1g7ye_	E:
1f	d1g7yf_	F:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Jelly Rolls (1293)

Homologous Superfamily: [code=2.60.120.200, no name defined] (421)

Cylindrica (Vigna unguiculata subsp) (5)

1a	1g7yB00	B:1-253
1b	1g7yF00	F:1-253
1c	1g7yE00	E:1-253
1d	1g7yA00	A:1-253
1e	1g7yC00	C:1-253
1f	1g7yD00	D:1-253

(no "Pfam Domain" information available for 1G7Y)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F (LEC5_VIGUC | P19588)

molecular function
	GO:0030246		carbohydrate binding		Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
	GO:0005537		mannose binding		Interacting selectively and non-covalently with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans.

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	1g7y
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UniProtKB/Swiss-Prot
	LEC5_VIGUC \| P19588	:	1lul

1lu1	THE SEED LECTIN FROM THE SAME PLANT

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 21)

Sites (21, 21)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 12)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (1, 6)

CATH Domains (1, 6)

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Gene Ontology (2, 2)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File