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(-) Description

Title :  THE 0.97 RESOLUTION STRUCTURE OF BUCANDIN, A NOVEL TOXIN ISOLATED FROM THE MALAYAN KRAIT
 
Authors :  P. Kuhn, A. M. Deacon, S. Comoso, G. Rajaseger, R. M. Kini, I. Uson, P. R. Kolatkar
Date :  06 Jul 00  (Deposition) - 26 Jul 00  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  0.97
Chains :  Asym./Biol. Unit :  A
Keywords :  Three-Finger Snake Presynaptic Neurotoxin (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  P. Kuhn, A. M. Deacon, S. Comoso, G. Rajaseger, R. M. Kini, I. Uson, P. R. Kolatkar
The Atomic Resolution Structure Of Bucandin, A Novel Toxin Isolated From The Malayan Krait, Determined By Direct Methods.
Acta Crystallogr. , Sect. D V. 56 1401 2000
PubMed-ID: 11053837  |  Reference-DOI: 10.1107/S0907444900011501
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BUCANDIN
    ChainsA
    Organism ScientificBUNGARUS CANDIDUS
    Organism Taxid92438
    SecretionVENOM

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1F94)

(-) Sites  (0, 0)

(no "Site" information available for 1F94)

(-) SS Bonds  (5, 5)

Asymmetric/Biological Unit
No.Residues
1A:3 -A:24
2A:6 -A:11
3A:17 -A:39
4A:43 -A:55
5A:56 -A:61

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1F94)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:63
 aligned with 3NOJ_BUNCA | P81782 from UniProtKB/Swiss-Prot  Length:63

    Alignment length:63
                                    10        20        30        40        50        60   
            3NOJ_BUNCA    1 MECYRCGVSGCHLKITCSAEETFCYKWLNKISNERWLGCAKTCTEIDTWNVYNKCCTTNLCNT 63
               SCOP domains d1f94a_ A: Bucandin                                             SCOP domains
               CATH domains 1f94A00 A:1-63 CD59                                             CATH domains
               Pfam domains --------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..eeeeeee......eeeeeee.....eeeeee.....ee...eeeeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------- Transcript
                  1f94 A  1 MECYRCGVSGCHLKITCSAEETFCYKWLNKISNERWLGCAKTCTEIDTWNVYNKCCTTNLCNT 63
                                    10        20        30        40        50        60   

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1F94)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (3NOJ_BUNCA | P81782)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0072556    other organism presynaptic membrane    A presynaptic membrane that is part of another organism, i.e. a secondary organism with which the first organism is interacting. A presynaptic membrane is specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        3NOJ_BUNCA | P817821ijc

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