1DP4 - JenaLib

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Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   DIMERIZED HORMONE BINDING DOMAIN OF THE ATRIAL NATRIURETIC PEPTIDE RECEPTOR

Authors :   F. Van Den Akker, X. Zhang, M. Miyagi, X. Huo, K. S. Misono, V. C. Yee

Date :   23 Dec 99 (Deposition) - 12 Jul 00 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,C
Biol. Unit 1: C  (2x)
Biol. Unit 2: A  (2x)

Keywords :   Periplasmic Binding Protein Fold, Dimer, Hormone/Growth Factor Receptor, Lyase Complex, Hormone-Growth Factor Receptor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. Van Den Akker, X. Zhang, M. Miyagi, X. Huo, K. S. Misono, V. C. Yee
Structure Of The Dimerized Hormone-Binding Domain Of A Guanylyl-Cyclase-Coupled Receptor.
Nature V. 406 101 2000
PubMed-ID: 10894551 | Reference-DOI: 10.1038/35017602

Molecule 1 - ATRIAL NATRIURETIC PEPTIDE RECEPTOR A
	Chains	:	A, C
	EC Number	:	4.6.1.2
	Engineered	:	YES
	Expression System	:	CHLOROCEBUS AETHIOPS
	Expression System Common	:	AFRICAN GREEN MONKEY
	Expression System Plasmid	:	PCDNA3-NPR
	Expression System Taxid	:	9534
	Fragment	:	HORMONE BINDING DOMAIN
	Organism Common	:	NORWAY RAT
	Organism Scientific	:	RATTUS NORVEGICUS
	Organism Taxid	:	10116

		1	2
Asymmetric Unit	:	A	C
Biological Unit 1 (2x)	:		C
Biological Unit 2 (2x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 20)

No.	Name	Count	Type	Full Name
1	CL	2	Ligand/Ion	CHLORIDE ION
2	NAG	9	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
3	SO4	9	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 20)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	NAG	10	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
3	SO4	10	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 16)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	NAG	8	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
3	SO4	8	Ligand/Ion	SULFATE ION

Asymmetric Unit (20, 20)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:13 , SER A:15 , TYR A:16 , ALA A:57 , GLY A:58 , VAL A:59 , NAG A:452 , HOH A:795 , HOH A:871	BINDING SITE FOR RESIDUE NAG A 451
02	AC2	SOFTWARE	ARG A:157 , NAG A:451 , HOH A:871	BINDING SITE FOR RESIDUE NAG A 452
03	AC3	SOFTWARE	TYR A:363 , ASN A:395 , SER A:398 , NAG A:454 , HOH A:704 , HOH A:860	BINDING SITE FOR RESIDUE NAG A 453
04	AC4	SOFTWARE	TYR A:363 , NAG A:453 , HOH A:785	BINDING SITE FOR RESIDUE NAG A 454
05	AC5	SOFTWARE	ASN C:13 , SER C:15 , TYR C:16 , GLY C:58 , NAG C:452 , HOH C:679 , HOH C:846	BINDING SITE FOR RESIDUE NAG C 451
06	AC6	SOFTWARE	VAL C:59 , ARG C:157 , NAG C:451 , HOH C:846	BINDING SITE FOR RESIDUE NAG C 452
07	AC7	SOFTWARE	TYR C:363 , ASN C:395 , SER C:398 , NAG C:454 , HOH C:710 , HOH C:747	BINDING SITE FOR RESIDUE NAG C 453
08	AC8	SOFTWARE	TYR C:363 , NAG C:453	BINDING SITE FOR RESIDUE NAG C 454
09	AC9	SOFTWARE	ASN C:180	BINDING SITE FOR RESIDUE NAG C 455
10	BC1	SOFTWARE	GLY A:265 , GLN A:266 , ASP A:267 , ARG A:268 , HOH A:677 , HOH A:699	BINDING SITE FOR RESIDUE SO4 A 601
11	BC2	SOFTWARE	GLY C:265 , GLN C:266 , ASP C:267 , ARG C:268 , HOH C:649 , HOH C:692	BINDING SITE FOR RESIDUE SO4 C 602
12	BC3	SOFTWARE	ASN A:55 , SER A:61 , ARG A:95 , HOH A:673 , HOH A:852 , HOH A:877	BINDING SITE FOR RESIDUE SO4 A 603
13	BC4	SOFTWARE	ARG A:142 , ARG A:178	BINDING SITE FOR RESIDUE SO4 A 604
14	BC5	SOFTWARE	ASP A:367 , ARG A:368 , HOH A:638 , HOH A:680 , HOH A:707 , HOH A:710 , HOH A:864	BINDING SITE FOR RESIDUE SO4 A 605
15	BC6	SOFTWARE	ASP C:367 , ARG C:368 , HOH C:709 , HOH C:737 , HOH C:761	BINDING SITE FOR RESIDUE SO4 C 606
16	BC7	SOFTWARE	ARG C:142 , ARG C:178	BINDING SITE FOR RESIDUE SO4 C 607
17	BC8	SOFTWARE	ASN C:55 , SER C:61 , ARG C:95 , HOH C:771	BINDING SITE FOR RESIDUE SO4 C 608
18	BC9	SOFTWARE	HOH A:811 , ARG C:205	BINDING SITE FOR RESIDUE SO4 C 609
19	CC1	SOFTWARE	PRO A:10 , TRP A:18 , SER A:53 , GLY A:85 , CYS A:86	BINDING SITE FOR RESIDUE CL A 610
20	CC2	SOFTWARE	PRO C:10 , TRP C:18 , SER C:53 , GLY C:85 , CYS C:86	BINDING SITE FOR RESIDUE CL C 611

Asymmetric Unit

No.	Residues
1	A:60	-	A:86
2	A:164	-	A:213
3	C:60	-	C:86
4	C:164	-	C:213
5	C:423	-	C:432

Asymmetric Unit

No.	Residues
1	Gly A:83	-	Pro A:84
2	Gly C:83	-	Pro C:84

(no "SAP(SNP)/Variant" information available for 1DP4)

Asymmetric Unit (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANF_RECEPTORS	PS00458	Natriuretic peptides receptors signature.	ANPRA_RAT	111-128	2	A:83-100 C:83-100

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANF_RECEPTORS	PS00458	Natriuretic peptides receptors signature.	ANPRA_RAT	111-128	2	- C:83-100

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ANF_RECEPTORS	PS00458	Natriuretic peptides receptors signature.	ANPRA_RAT	111-128	2	A:83-100 -

Asymmetric Unit (7, 13)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSRNOT00000020307	1	ENSRNOE00000140660	chr2:182740242-182739164	1079	ANPRA_RAT	1-237	237	2	A:1-209 C:1-209	209 209
1.2	ENSRNOT00000020307	2	ENSRNOE00000140878	chr2:182738316-182738117	200	ANPRA_RAT	237-303	67	2	A:209-275 C:209-275 (gaps)	67 67
1.3	ENSRNOT00000020307	3	ENSRNOE00000141093	chr2:182737505-182737392	114	ANPRA_RAT	304-341	38	2	A:276-313 C:276-313	38 38
1.4	ENSRNOT00000020307	4	ENSRNOE00000141279	chr2:182736964-182736829	136	ANPRA_RAT	342-387	46	2	A:314-359 C:314-359	46 46
1.5	ENSRNOT00000020307	5	ENSRNOE00000141472	chr2:182736529-182736438	92	ANPRA_RAT	387-417	31	2	A:359-389 C:359-389	31 31
1.6	ENSRNOT00000020307	6	ENSRNOE00000141683	chr2:182735718-182735583	136	ANPRA_RAT	418-463	46	2	A:390-425 C:390-435	36 46
1.7	ENSRNOT00000020307	7	ENSRNOE00000141882	chr2:182735385-182735301	85	ANPRA_RAT	463-491	29	1	- C:435-435	- 1
1.8	ENSRNOT00000020307	8	ENSRNOE00000142079	chr2:182734081-182733961	121	ANPRA_RAT	491-531	41	0	-	-
1.9	ENSRNOT00000020307	9	ENSRNOE00000142284	chr2:182733408-182733334	75	ANPRA_RAT	532-556	25	0	-	-
1.10	ENSRNOT00000020307	10	ENSRNOE00000142499	chr2:182733123-182733046	78	ANPRA_RAT	557-582	26	0	-	-
1.11	ENSRNOT00000020307	11	ENSRNOE00000142704	chr2:182732746-182732642	105	ANPRA_RAT	583-617	35	0	-	-
1.12	ENSRNOT00000020307	12	ENSRNOE00000142897	chr2:182732401-182732330	72	ANPRA_RAT	618-641	24	0	-	-
1.13	ENSRNOT00000020307	13	ENSRNOE00000143106	chr2:182732232-182732076	157	ANPRA_RAT	642-694	53	0	-	-
1.14	ENSRNOT00000020307	14	ENSRNOE00000143318	chr2:182731603-182731448	156	ANPRA_RAT	694-746	53	0	-	-
1.15	ENSRNOT00000020307	15	ENSRNOE00000143536	chr2:182731205-182731037	169	ANPRA_RAT	746-802	57	0	-	-
1.16	ENSRNOT00000020307	16	ENSRNOE00000143732	chr2:182730181-182730035	147	ANPRA_RAT	802-851	50	0	-	-
1.17	ENSRNOT00000020307	17	ENSRNOE00000143914	chr2:182729869-182729746	124	ANPRA_RAT	851-892	42	0	-	-
1.18	ENSRNOT00000020307	18	ENSRNOE00000144089	chr2:182729618-182729550	69	ANPRA_RAT	893-915	23	0	-	-
1.19	ENSRNOT00000020307	19	ENSRNOE00000144261	chr2:182729068-182728894	175	ANPRA_RAT	916-974	59	0	-	-
1.20	ENSRNOT00000020307	20	ENSRNOE00000144438	chr2:182728721-182728623	99	ANPRA_RAT	974-1007	34	0	-	-
1.21	ENSRNOT00000020307	21	ENSRNOE00000144613	chr2:182725718-182725627	92	ANPRA_RAT	1007-1037	31	0	-	-
1.22	ENSRNOT00000020307	22	ENSRNOE00000248673	chr2:182725502-182724916	587	ANPRA_RAT	1038-1057	20	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:425
 aligned with ANPRA_RAT | P18910 from UniProtKB/Swiss-Prot  Length:1057

    Alignment length:425
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448     
            ANPRA_RAT    29 SDLTVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAAVDLKWEHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFVEGDPDHYPKLLRAVRRKGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQSLKSAQGLVPQKPWERGDGQDRSARQAFQAAKIITYKEPDNPEYLEFLKQLKLLADKKFNFTVEDGLKNIIPASFHDGLLLYVQAVTETLAQGGTVTDGENITQRMWNRSFQGVTGYLKIDRNGDRDTDFSLWDMDPETGAFRVVLNYNGTSQELMAVSEHKLYWPLGYPPPDVPKCGF 453
               SCOP domains d1dp4a_ A: Hormone binding domain of the atrial natriuretic peptide receptor                                                                                                                                                                                                                                                                                                                                                              SCOP domains
               CATH domains 1dp4A01 A:1-127,A:285-372  [code=3.40.50.2300, no name defined]                                                                1dp4A02 A:128-284,A:373-425  [code=3.40.50.2300, no name defined]                                                                                            1dp4A01 A:1-127,A:285-372  [code=3.40.50.2300, no name defined]                         1dp4A02 A:128-284,A:373-425                           CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee.........hhhhhhhhhhhhhhhhhh........eeeeeeee..........hhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhh..eee....hhhhhh......eee...hhhhhhhhhhhhhhhhh...eeeeeee......hhhhhhhhhhhhhhhhhhh.eeeeeee...hhhhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhh.......eeeee........................hhhhhhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh...eeeee..eeeee.........eeeeee......eeeeeee......eee...................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------ANF_RECEPTORS     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:1-209 UniProt: 1-237 [INCOMPLETE]                                                                                                                                                               ------------------------------------------------------------------Exon 1.3  PDB: A:276-313              Exon 1.4  PDB: A:314-359 UniProt: 342-387     ------------------------------Exon 1.6  PDB: A:390-425             Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: A:209-275 UniProt: 237-303                          -----------------------------------------------------------------------------------Exon 1.5  PDB: A:359-389       ------------------------------------ Transcript 1 (2)
                 1dp4 A   1 SDLTVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAAVDLKWEHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFVEGDPDHYPKLLRAVRRKGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQSLKSAQGLVPQKPWERGDGQDRSARQAFQAAKIITYKEPDNPEYLEFLKQLKLLADKKFNFTVEDGLKNIIPASFHDGLLLYVQAVTETLAQGGTVTDGENITQRMWNRSFQGVTGYLKIDRNGDRDTDFSLWDMDPETGAFRVVLNYNGTSQELMAVSEHKLYWPLGYPPPDVPKCGF 425
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420

Chain C from PDB  Type:PROTEIN  Length:429
 aligned with ANPRA_RAT | P18910 from UniProtKB/Swiss-Prot  Length:1057

    Alignment length:435
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458     
            ANPRA_RAT    29 SDLTVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAAVDLKWEHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFVEGDPDHYPKLLRAVRRKGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQSLKSAQGLVPQKPWERGDGQDRSARQAFQAAKIITYKEPDNPEYLEFLKQLKLLADKKFNFTVEDGLKNIIPASFHDGLLLYVQAVTETLAQGGTVTDGENITQRMWNRSFQGVTGYLKIDRNGDRDTDFSLWDMDPETGAFRVVLNYNGTSQELMAVSEHKLYWPLGYPPPDVPKCGFDNEDPACNQD 463
               SCOP domains d1dp4c_ C: Hormone binding domain of the atrial natriuretic peptide receptor                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 1dp4C01 C:1-127,C:285-372  [code=3.40.50.2300, no name defined]                                                                1dp4C02 C:128-284,C:373-425  [code=3.40.50.2300, no name defined]                                                                                            1dp4C01 C:1-127,C:285-372  [code=3.40.50.2300, no name defined]                         1dp4C02 C:128-284,C:373-425                          ---------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee.........hhhhhhhhhhhhhhhhhh........eeeeeeee..........hhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhhhhh..eee....hhhhhh......eee...hhhhhhhhhhhhhhhhh...eeeeee.......hhhhhhhhhhhhhhhhhhh.eeeeee......hhhhhhhhhhhhhh.eeeee.hhhhhhhhhhhhhhh.......eeeee........------..........hhhhhhhhh..eeeeee....hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhh...eeeee..eeeee.........eeeeee......eeeeeeee....eeee................................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------ANF_RECEPTORS     ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: C:1-209 UniProt: 1-237 [INCOMPLETE]                                                                                                                                                               ------------------------------------------------------------------Exon 1.3  PDB: C:276-313              Exon 1.4  PDB: C:314-359 UniProt: 342-387     ------------------------------Exon 1.6  PDB: C:390-435 UniProt: 418-463      Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.2  PDB: C:209-275 (gaps) UniProt: 237-303                   -----------------------------------------------------------------------------------Exon 1.5  PDB: C:359-389       ---------------------------------------------1 Transcript 1 (2)
                 1dp4 C   1 SDLTVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAAVDLKWEHSPAVFLGPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFVEGDPDHYPKLLRAVRRKGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHLDVFGQSLK------PQKPWERGDGQDRSARQAFQAAKIITYKEPDNPEYLEFLKQLKLLADKKFNFTVEDGLKNIIPASFHDGLLLYVQAVTETLAQGGTVTDGENITQRMWNRSFQGVTGYLKIDRNGDRDTDFSLWDMDPETGAFRVVLNYNGTSQELMAVSEHKLYWPLGYPPPDVPKCGFDNEDPACNQD 435
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240        |-     | 260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430     
                                                                                                                                                                                                                                                                                  249    256

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.2300, no name defined] (308)

Norway rat (Rattus norvegicus) (7)

1a	1dp4C02	C:128-284,C:373-425
1b	1dp4A02	A:128-284,A:373-425
1c	1dp4A01	A:1-127,A:285-372
1d	1dp4C01	C:1-127,C:285-372

(no "Pfam Domain" information available for 1DP4)

Asymmetric Unit(hide GO term definitions)

Chain A,C (ANPRA_RAT | P18910)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0004016	adenylate cyclase activity	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.
	GO:0004383	guanylate cyclase activity	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.
	GO:0042562	hormone binding	Interacting selectively and non-covalently with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone.
	GO:0016829	lyase activity	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
	GO:0016941	natriuretic peptide receptor activity	Combining with a natriuretic peptide and transmitting the signal to initiate a change in cell activity.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0017046	peptide hormone binding	Interacting selectively and non-covalently with any peptide with hormonal activity in animals.
	GO:0016849	phosphorus-oxygen lyase activity	Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0019901	protein kinase binding	Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
biological process
	GO:0006182	cGMP biosynthetic process	The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate.
	GO:0007166	cell surface receptor signaling pathway	A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
	GO:0009190	cyclic nucleotide biosynthetic process	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.
	GO:0042417	dopamine metabolic process	The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.
	GO:0035556	intracellular signal transduction	The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
	GO:0048662	negative regulation of smooth muscle cell proliferation	Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation.
	GO:0030828	positive regulation of cGMP biosynthetic process	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
	GO:0007168	receptor guanylyl cyclase signaling pathway	A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell where the receptor possesses guanylyl cyclase activity, and ending with regulation of a downstream cellular process, e.g. transcription.
	GO:0050880	regulation of blood vessel size	Any process that modulates the size of blood vessels.
cellular component
	GO:0008074	guanylate cyclase complex, soluble	Complex that possesses guanylate cyclase activity and is not bound to a membrane.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0043235	receptor complex	Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

Asymmetric Unit
	Complete Structure
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	1dp4
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	ANPRA_RAT \| P18910	:	1t34 1t53 3a3k

(no "Related Entries Specified in the PDB File" available for 1DP4)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 20)

Sites (20, 20)

SS Bonds (5, 5)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 2)

Exons (7, 13)

Sequences/Alignments

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SCOP Domains (1, 2)

CATH Domains (1, 4)

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Gene Ontology (28, 28)

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Related Entries Specified in the PDB File