1CB5 - JenaLib

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Title :   HUMAN BLEOMYCIN HYDROLASE.

Authors :   P. A. O'Farrell, F. Gonzalez, W. Zheng, S. A. Johnston, L. Joshua-Tor

Date :   01 Mar 99 (Deposition) - 01 Mar 00 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.59

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A,B,C  (2x)

Keywords :   Hydrolase, Aminopeptidase, Cysteine Protease, Self- Compartmentalizing, Bleomycin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. A. O'Farrell, F. Gonzalez, W. Zheng, S. A. Johnston, L. Joshua-Tor
Crystal Structure Of Human Bleomycin Hydrolase, A Self-Compartmentalizing Cysteine Protease.
Structure Fold. Des. V. 7 619 1999
PubMed-ID: 10404591 | Reference-DOI: 10.1016/S0969-2126(99)80083-5

Molecule 1 - BLEOMYCIN HYDROLASE
	Cellular Location	:	CYTOPLASM
	Chains	:	A, B, C
	EC Number	:	3.4.22.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PKH260HUBH
	Expression System Strain	:	BL21(DE3)/PLYSS
	Expression System Taxid	:	562
	Expression System Vector	:	PLASMID
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (2x)	:	A	B	C

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1CB5)

(no "Site" information available for 1CB5)

(no "SS Bond" information available for 1CB5)

Asymmetric Unit

No.	Residues
1	Lys A:62	-	Pro A:63
2	Lys B:62	-	Pro B:63
3	Lys C:62	-	Pro C:63

Asymmetric Unit (1, 3)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_010896	I	443	V	BLMH_HUMAN	Polymorphism	1050565	A/B/C	I	443	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (1, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_010896	I	443	V	BLMH_HUMAN	Polymorphism	1050565	A/B/C	I	443	V

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (1, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOL_PROTEASE_CYS	PS00139	Eukaryotic thiol (cysteine) proteases cysteine active site.	BLMH_HUMAN	67-78	3	A:67-78 B:67-78 C:67-78

Biological Unit 1 (1, 6)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	THIOL_PROTEASE_CYS	PS00139	Eukaryotic thiol (cysteine) proteases cysteine active site.	BLMH_HUMAN	67-78	6	A:67-78 B:67-78 C:67-78

Asymmetric Unit (12, 36)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000261714	1	ENSE00002170280	chr17:28619074-28618825	250	BLMH_HUMAN	1-5	5	3	A:2-5 B:2-5 C:2-5	4 4 4
1.2	ENST00000261714	2	ENSE00001607651	chr17:28618526-28618329	198	BLMH_HUMAN	5-71	67	3	A:5-71 B:5-71 C:5-71	67 67 67
1.3	ENST00000261714	3	ENSE00000947605	chr17:28616500-28616391	110	BLMH_HUMAN	71-107	37	3	A:71-107 B:71-107 C:71-107	37 37 37
1.4	ENST00000261714	4	ENSE00000947606	chr17:28614965-28614824	142	BLMH_HUMAN	108-155	48	3	A:108-155 B:108-155 C:108-155	48 48 48
1.5	ENST00000261714	5	ENSE00000947607	chr17:28613920-28613832	89	BLMH_HUMAN	155-184	30	3	A:155-184 B:155-184 C:155-184	30 30 30
1.6	ENST00000261714	6	ENSE00000947608	chr17:28612498-28612406	93	BLMH_HUMAN	185-215	31	3	A:185-215 B:185-215 C:185-215	31 31 31
1.7	ENST00000261714	7	ENSE00000947609	chr17:28601215-28601060	156	BLMH_HUMAN	216-267	52	3	A:216-267 B:216-267 C:216-267	52 52 52
1.8	ENST00000261714	8	ENSE00000947610	chr17:28599917-28599759	159	BLMH_HUMAN	268-320	53	3	A:268-320 B:268-320 C:268-320	53 53 53
1.9	ENST00000261714	9	ENSE00000947611	chr17:28599646-28599579	68	BLMH_HUMAN	321-343	23	3	A:321-343 B:321-343 C:321-343	23 23 23
1.10	ENST00000261714	10	ENSE00001114333	chr17:28598406-28598289	118	BLMH_HUMAN	343-382	40	3	A:343-382 B:343-382 C:343-382	40 40 40
1.11	ENST00000261714	11	ENSE00000708897	chr17:28593972-28593903	70	BLMH_HUMAN	383-406	24	3	A:383-406 B:383-406 C:383-406	24 24 24
1.12	ENST00000261714	12	ENSE00001250865	chr17:28576186-28575223	964	BLMH_HUMAN	406-455	50	3	A:406-454 B:406-454 C:406-454	49 49 49

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:453
 aligned with BLMH_HUMAN | Q13867 from UniProtKB/Swiss-Prot  Length:455

    Alignment length:453
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451   
           BLMH_HUMAN     2 SSSGLNSEKVAALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRAQHVFQHAVPQEGKPITNQKSSGRCWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYQKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKYNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA 454
               SCOP domains d1cb5a_ A: Bleomycin hydrolase                                                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------1cb5A01 A:54-454 Cysteine proteinases                                                                                                                                                                                                                                                                                                                                                                             CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhh.hhhhhhhhhh....hhhhh..hhhhhh........................hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh........hhhhhhhhhhh....hhh.....hhh..hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee....hhhhhhhh......hhheeeee..........eeeee............eeee..hhhhhhhhhhhhh....eeeee...................hhhhh........hhhhhh.......eeeeeeeee..........eeeee...........eeeeehhhhhhheeeeeeehhh..hhhhhhhh...eee....hhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V----------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------THIOL_PROTEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1 -----------------------------------------------------------------Exon 1.3  PDB: A:71-107              Exon 1.4  PDB: A:108-155 UniProt: 108-155       -----------------------------Exon 1.6  PDB: A:185-215       Exon 1.7  PDB: A:216-267 UniProt: 216-267           Exon 1.8  PDB: A:268-320 UniProt: 268-320            ----------------------Exon 1.10  PDB: A:343-382               Exon 1.11  PDB: A:383-40------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: A:5-71 UniProt: 5-71                                -----------------------------------------------------------------------------------Exon 1.5  PDB: A:155-184      ----------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:321-34--------------------------------------------------------------Exon 1.12  PDB: A:406-454 UniProt: 406-455        Transcript 1 (2)
                 1cb5 A   2 SSSGLNSEKVAALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRAQHVFQHAVPQEGKPITNQKSSGRCWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYQKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA 454
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451

Chain B from PDB  Type:PROTEIN  Length:453
 aligned with BLMH_HUMAN | Q13867 from UniProtKB/Swiss-Prot  Length:455

    Alignment length:453
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451   
           BLMH_HUMAN     2 SSSGLNSEKVAALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRAQHVFQHAVPQEGKPITNQKSSGRCWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYQKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKYNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA 454
               SCOP domains d1cb5b_ B: Bleomycin hydrolase                                                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------1cb5B01 B:54-454 Cysteine proteinases                                                                                                                                                                                                                                                                                                                                                                             CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhh.hhhhhhhhhh....hhhhh..hhhhhh........................hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh........hhhhhhhhhhh....hhh.....hhh..hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee....hhhhhhhh......hhheeeee..........eeeee............eeee..hhhhhhhhhhhhh....eeeee...................hhhhh........hhhhhh.......eeeeeeeee..........eeeee...........eeeeehhhhhhheeeeeeehhh..hhhhhhhh...eee....hhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V----------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------THIOL_PROTEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1 -----------------------------------------------------------------Exon 1.3  PDB: B:71-107              Exon 1.4  PDB: B:108-155 UniProt: 108-155       -----------------------------Exon 1.6  PDB: B:185-215       Exon 1.7  PDB: B:216-267 UniProt: 216-267           Exon 1.8  PDB: B:268-320 UniProt: 268-320            ----------------------Exon 1.10  PDB: B:343-382               Exon 1.11  PDB: B:383-40------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: B:5-71 UniProt: 5-71                                -----------------------------------------------------------------------------------Exon 1.5  PDB: B:155-184      ----------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:321-34--------------------------------------------------------------Exon 1.12  PDB: B:406-454 UniProt: 406-455        Transcript 1 (2)
                 1cb5 B   2 SSSGLNSEKVAALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRAQHVFQHAVPQEGKPITNQKSSGRCWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYQKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA 454
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451

Chain C from PDB  Type:PROTEIN  Length:453
 aligned with BLMH_HUMAN | Q13867 from UniProtKB/Swiss-Prot  Length:455

    Alignment length:453
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451   
           BLMH_HUMAN     2 SSSGLNSEKVAALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRAQHVFQHAVPQEGKPITNQKSSGRCWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYQKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKYNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA 454
               SCOP domains d1cb5c_ C: Bleomycin hydrolase                                                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------1cb5C01 C:54-454 Cysteine proteinases                                                                                                                                                                                                                                                                                                                                                                             CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhh.hhhhhhhhhh....hhhhh..hhhhhh........................hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh........hhhhhhhhhhh....hhh.....hhh..hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh........eeee.....eeee....hhhhhhhh......hhheeeee..........eeeee............eeee..hhhhhhhhhhhhh....eeeee...................hhhhh........hhhhhh.......eeeeeeeee..........eeeee...........eeeeehhhhhhheeeeeeehhh..hhhhhhhh...eee....hhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V----------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------THIOL_PROTEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.1 -----------------------------------------------------------------Exon 1.3  PDB: C:71-107              Exon 1.4  PDB: C:108-155 UniProt: 108-155       -----------------------------Exon 1.6  PDB: C:185-215       Exon 1.7  PDB: C:216-267 UniProt: 216-267           Exon 1.8  PDB: C:268-320 UniProt: 268-320            ----------------------Exon 1.10  PDB: C:343-382               Exon 1.11  PDB: C:383-40------------------------------------------------ Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: C:5-71 UniProt: 5-71                                -----------------------------------------------------------------------------------Exon 1.5  PDB: C:155-184      ----------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: C:321-34--------------------------------------------------------------Exon 1.12  PDB: C:406-454 UniProt: 406-455        Transcript 1 (2)
                 1cb5 C   2 SSSGLNSEKVAALIQKLNSDPQFVLAQNVGTTHDLLDICLKRATVQRAQHVFQHAVPQEGKPITNQKSSGRCWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYQKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDEWFSEYVYEVVVDRKHVPEEVLAVLEQEPIILPAWDPMGALA 454
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Cysteine proteinases (392)

Superfamily: Cysteine proteinases (392)

Family: Papain-like (200)

Protein domain: Bleomycin hydrolase (11)

Human (Homo sapiens) [TaxId: 9606] (2)

1a	d1cb5a_	A:
1b	d1cb5b_	B:
1c	d1cb5c_	C:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Complex (3881)

Topology: Cathepsin B; Chain A (207)

Homologous Superfamily: Cysteine proteinases (207)

Human (Homo sapiens) (92)

1a	1cb5A01	A:54-454
1b	1cb5B01	B:54-454
1c	1cb5C01	C:54-454

(no "Pfam Domain" information available for 1CB5)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (BLMH_HUMAN | Q13867)

molecular function
	GO:0004177	aminopeptidase activity	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
	GO:0004180	carboxypeptidase activity	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide.
	GO:0004197	cysteine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
	GO:0008234	cysteine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0000209	protein polyubiquitination	Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
	GO:0042493	response to drug	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
	GO:0009636	response to toxic substance	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Asymmetric Unit
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	Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1cb5)

	Sites
(no "Sites" information available for 1cb5)

	Cis Peptide Bonds
		Lys A:62 - Pro A:63	[ RasMol ]
		Lys B:62 - Pro B:63	[ RasMol ]
		Lys C:62 - Pro C:63	[ RasMol ]

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

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	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	1cb5
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		Orientation in Membranes	:	OPM
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		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
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Access by UniProt ID/Accession number
	BLMH_HUMAN \| Q13867
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	3.4.22.-
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		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	BLMH_HUMAN \| Q13867
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	BLMH_HUMAN \| Q13867	:	2cb5

(no "Related Entries Specified in the PDB File" available for 1CB5)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 3)

PROSITE Motifs (1, 3)

Exons (12, 36)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 3)

CATH Domains (1, 3)

Pfam Domains (0, 0)

Gene Ontology (15, 15)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File