1BHG - JenaLib

Biol.Unit 1 - manually (Jmol Viewer)

Asym.Unit - manually (Jmol Viewer)

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   HUMAN BETA-GLUCURONIDASE AT 2.6 A RESOLUTION

Authors :   S. Jain, W. B. Drendel

Date :   04 Mar 96 (Deposition) - 17 Sep 97 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.53

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (2x)

Keywords :   Lysosomal Enzyme, Acid Hydrolase, Glycosidase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Jain, W. B. Drendel, Z. W. Chen, F. S. Mathews, W. S. Sly, J. H. Grubb
Structure Of Human Beta-Glucuronidase Reveals Candidate Lysosomal Targeting And Active-Site Motifs.
Nat. Struct. Biol. V. 3 375 1996
PubMed-ID: 8599764 | Reference-DOI: 10.1038/NSB0496-375
(for further references see the PDB file header)

Molecule 1 - BETA-GLUCURONIDASE
	Cell Line	:	MOUSE L-CELL LINE
	Chains	:	A, B
	EC Number	:	3.2.1.31
	Engineered	:	YES
	Expression System	:	MUS MUSCULUS
	Expression System Common	:	HOUSE MOUSE
	Expression System Gene	:	HUMAN PLACENTAL GUS GENE CDNA
	Expression System Plasmid	:	PMSXND
	Expression System Taxid	:	10090
	Gene	:	HUMAN PLACENTAL GUS GENE CDNA
	Organ	:	PLACENTA
	Organelle	:	LYSOSOME
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Other Details	:	LYSOSOMAL ENZYME
	Synonym	:	GUS GENE PRODUCT

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (2x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 18)

No.	Name	Count	Type	Full Name
1	BMA	2	Ligand/Ion	BETA-D-MANNOSE
2	MAN	12	Ligand/Ion	ALPHA-D-MANNOSE
3	NAG	4	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 1 (3, 36)

No.	Name	Count	Type	Full Name
1	BMA	4	Ligand/Ion	BETA-D-MANNOSE
2	MAN	24	Ligand/Ion	ALPHA-D-MANNOSE
3	NAG	8	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (18, 18)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:97 , TRP A:98 , ASN A:173 , ASN A:174 , NAG A:652	BINDING SITE FOR RESIDUE NAG A 651
02	AC2	SOFTWARE	ASP A:53 , ASN A:54 , ILE A:186 , TYR A:188 , NAG A:651 , BMA A:653 , MAN A:654 , MAN A:655	BINDING SITE FOR RESIDUE NAG A 652
03	AC3	SOFTWARE	GLN A:187 , TYR A:188 , NAG A:652 , MAN A:654 , MAN A:655	BINDING SITE FOR RESIDUE BMA A 653
04	AC4	SOFTWARE	NAG A:652 , BMA A:653 , MAN A:657 , MAN A:658	BINDING SITE FOR RESIDUE MAN A 654
05	AC5	SOFTWARE	PRO A:178 , THR A:185 , ILE A:186 , GLN A:187 , NAG A:652 , BMA A:653 , MAN A:656	BINDING SITE FOR RESIDUE MAN A 655
06	AC6	SOFTWARE	MAN A:655	BINDING SITE FOR RESIDUE MAN A 656
07	AC7	SOFTWARE	ARG A:55 , PRO A:475 , MAN A:654	BINDING SITE FOR RESIDUE MAN A 657
08	AC8	SOFTWARE	ASP A:53 , MAN A:654 , MAN A:659	BINDING SITE FOR RESIDUE MAN A 658
09	AC9	SOFTWARE	LYS A:197 , GLY A:198 , GLN A:247 , MAN A:658	BINDING SITE FOR RESIDUE MAN A 659
10	BC1	SOFTWARE	ARG B:55 , GLY B:97 , TRP B:98 , ASN B:173 , THR B:175 , NAG B:652	BINDING SITE FOR RESIDUE NAG B 651
11	BC2	SOFTWARE	ASN B:54 , ARG B:55 , THR B:177 , ILE B:186 , TYR B:188 , NAG B:651 , BMA B:653 , MAN B:654 , MAN B:657	BINDING SITE FOR RESIDUE NAG B 652
12	BC3	SOFTWARE	ILE B:186 , TYR B:188 , GLN B:279 , NAG B:652 , MAN B:654 , MAN B:655 , MAN B:657	BINDING SITE FOR RESIDUE BMA B 653
13	BC4	SOFTWARE	TYR B:188 , ASN B:245 , GLN B:247 , GLN B:279 , NAG B:652 , BMA B:653 , MAN B:657 , MAN B:658	BINDING SITE FOR RESIDUE MAN B 654
14	BC5	SOFTWARE	THR B:185 , BMA B:653 , MAN B:656	BINDING SITE FOR RESIDUE MAN B 655
15	BC6	SOFTWARE	GLN B:279 , MAN B:655	BINDING SITE FOR RESIDUE MAN B 656
16	BC7	SOFTWARE	SER B:236 , ASN B:245 , NAG B:652 , BMA B:653 , MAN B:654	BINDING SITE FOR RESIDUE MAN B 657
17	BC8	SOFTWARE	ASN B:54 , GLN B:247 , MAN B:654 , MAN B:659	BINDING SITE FOR RESIDUE MAN B 658
18	BC9	SOFTWARE	LYS B:197 , GLY B:198 , GLN B:277 , MAN B:658	BINDING SITE FOR RESIDUE MAN B 659

(no "SS Bond" information available for 1BHG)

Asymmetric Unit

No.	Residues
1	Val A:79	-	Pro A:80
2	Leu A:181	-	Pro A:182
3	Val B:79	-	Pro B:80
4	Leu B:181	-	Pro B:182

Asymmetric Unit (38, 76)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_058511	P	30	S	BGLR_HUMAN	Disease (MPS7)	747792546	A/B	P	30	S
02	UniProt	VAR_037914	C	38	G	BGLR_HUMAN	Disease (MPS7)	---	A/B	C	38	G
03	UniProt	VAR_037915	S	52	F	BGLR_HUMAN	Disease (MPS7)	---	A/B	S	52	F
04	UniProt	VAR_037916	G	136	R	BGLR_HUMAN	Disease (MPS7)	---	A/B	G	136	R
05	UniProt	VAR_037917	P	148	S	BGLR_HUMAN	Disease (MPS7)	121918177	A/B	P	148	S
06	UniProt	VAR_037918	E	150	K	BGLR_HUMAN	Disease (MPS7)	---	A/B	E	150	K
07	UniProt	VAR_058512	D	152	G	BGLR_HUMAN	Disease (MPS7)	---	A/B	D	152	G
08	UniProt	VAR_037919	D	152	N	BGLR_HUMAN	Polymorphism	149606212	A/B	D	152	N
09	UniProt	VAR_037920	L	176	F	BGLR_HUMAN	Disease (MPS7)	121918181	A/B	L	176	F
10	UniProt	VAR_003196	R	216	W	BGLR_HUMAN	Disease (MPS7)	121918174	A/B	R	216	W
11	UniProt	VAR_058513	L	243	P	BGLR_HUMAN	Disease (MPS7)	---	A/B	L	243	P
12	UniProt	VAR_037921	Y	320	C	BGLR_HUMAN	Disease (MPS7)	---	A/B	Y	320	C
13	UniProt	VAR_037922	Y	320	S	BGLR_HUMAN	Disease (MPS7)	---	A/B	Y	320	S
14	UniProt	VAR_058514	N	339	S	BGLR_HUMAN	Disease (MPS7)	---	A/B	N	339	S
15	UniProt	VAR_037923	K	350	N	BGLR_HUMAN	Disease (MPS7)	121918182	A/B	K	350	N
16	UniProt	VAR_037924	H	351	Y	BGLR_HUMAN	Disease (MPS7)	191153460	A/B	H	351	Y
17	UniProt	VAR_003197	A	354	V	BGLR_HUMAN	Disease (MPS7)	121918175	A/B	A	354	V
18	UniProt	VAR_058516	D	362	N	BGLR_HUMAN	Disease (MPS7)	398123234	A/B	D	362	N
19	UniProt	VAR_058517	P	364	L	BGLR_HUMAN	Disease (MPS7)	771629102	A/B	P	364	L
20	UniProt	VAR_037925	R	374	C	BGLR_HUMAN	Disease (MPS7)	747572640	A/B	R	374	C
21	UniProt	VAR_055884	L	376	F	BGLR_HUMAN	Polymorphism	11559283	A/B	L	376	F
22	UniProt	VAR_003198	R	382	C	BGLR_HUMAN	Disease (MPS7)	121918173	A/B	R	382	C
23	UniProt	VAR_037926	R	382	H	BGLR_HUMAN	Disease (MPS7)	---	A/B	R	382	H
24	UniProt	VAR_037927	P	408	S	BGLR_HUMAN	Disease (MPS7)	779091113	A/B	P	408	S
25	UniProt	VAR_037928	P	415	L	BGLR_HUMAN	Disease (MPS7)	751025746	A/B	P	415	L
26	UniProt	VAR_037929	R	435	P	BGLR_HUMAN	Disease (MPS7)	---	A/B	R	435	P
27	UniProt	VAR_037930	R	477	W	BGLR_HUMAN	Disease (MPS7)	774393243	A/B	R	477	W
28	UniProt	VAR_037931	Y	495	C	BGLR_HUMAN	Disease (MPS7)	121918178	A/B	Y	495	C
29	UniProt	VAR_037932	Y	508	C	BGLR_HUMAN	Disease (MPS7)	---	A/B	Y	508	C
30	UniProt	VAR_058518	E	540	K	BGLR_HUMAN	Disease (MPS7)	---	A/B	E	540	K
31	UniProt	VAR_037933	G	572	D	BGLR_HUMAN	Disease (MPS7)	---	A/B	G	572	D
32	UniProt	VAR_037934	R	577	L	BGLR_HUMAN	Disease (MPS7)	121918183	A/B	R	577	L
33	UniProt	VAR_037935	K	606	N	BGLR_HUMAN	Disease (MPS7)	---	A/B	K	606	N
34	UniProt	VAR_058519	G	607	A	BGLR_HUMAN	Disease (MPS7)	---	A/B	G	607	A
35	UniProt	VAR_003199	R	611	W	BGLR_HUMAN	Disease (MPS7)	121918176	A/B	R	611	W
36	UniProt	VAR_003200	A	619	V	BGLR_HUMAN	Disease (MPS7)	121918172	A/B	A	619	V
37	UniProt	VAR_037936	Y	626	H	BGLR_HUMAN	Disease (MPS7)	777613366	A/B	Y	626	H
38	UniProt	VAR_003201	W	627	C	BGLR_HUMAN	Disease (MPS7)	121918184	A/B	W	627	C

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (38, 152)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_058511	P	30	S	BGLR_HUMAN	Disease (MPS7)	747792546	A/B	P	30	S
02	UniProt	VAR_037914	C	38	G	BGLR_HUMAN	Disease (MPS7)	---	A/B	C	38	G
03	UniProt	VAR_037915	S	52	F	BGLR_HUMAN	Disease (MPS7)	---	A/B	S	52	F
04	UniProt	VAR_037916	G	136	R	BGLR_HUMAN	Disease (MPS7)	---	A/B	G	136	R
05	UniProt	VAR_037917	P	148	S	BGLR_HUMAN	Disease (MPS7)	121918177	A/B	P	148	S
06	UniProt	VAR_037918	E	150	K	BGLR_HUMAN	Disease (MPS7)	---	A/B	E	150	K
07	UniProt	VAR_058512	D	152	G	BGLR_HUMAN	Disease (MPS7)	---	A/B	D	152	G
08	UniProt	VAR_037919	D	152	N	BGLR_HUMAN	Polymorphism	149606212	A/B	D	152	N
09	UniProt	VAR_037920	L	176	F	BGLR_HUMAN	Disease (MPS7)	121918181	A/B	L	176	F
10	UniProt	VAR_003196	R	216	W	BGLR_HUMAN	Disease (MPS7)	121918174	A/B	R	216	W
11	UniProt	VAR_058513	L	243	P	BGLR_HUMAN	Disease (MPS7)	---	A/B	L	243	P
12	UniProt	VAR_037921	Y	320	C	BGLR_HUMAN	Disease (MPS7)	---	A/B	Y	320	C
13	UniProt	VAR_037922	Y	320	S	BGLR_HUMAN	Disease (MPS7)	---	A/B	Y	320	S
14	UniProt	VAR_058514	N	339	S	BGLR_HUMAN	Disease (MPS7)	---	A/B	N	339	S
15	UniProt	VAR_037923	K	350	N	BGLR_HUMAN	Disease (MPS7)	121918182	A/B	K	350	N
16	UniProt	VAR_037924	H	351	Y	BGLR_HUMAN	Disease (MPS7)	191153460	A/B	H	351	Y
17	UniProt	VAR_003197	A	354	V	BGLR_HUMAN	Disease (MPS7)	121918175	A/B	A	354	V
18	UniProt	VAR_058516	D	362	N	BGLR_HUMAN	Disease (MPS7)	398123234	A/B	D	362	N
19	UniProt	VAR_058517	P	364	L	BGLR_HUMAN	Disease (MPS7)	771629102	A/B	P	364	L
20	UniProt	VAR_037925	R	374	C	BGLR_HUMAN	Disease (MPS7)	747572640	A/B	R	374	C
21	UniProt	VAR_055884	L	376	F	BGLR_HUMAN	Polymorphism	11559283	A/B	L	376	F
22	UniProt	VAR_003198	R	382	C	BGLR_HUMAN	Disease (MPS7)	121918173	A/B	R	382	C
23	UniProt	VAR_037926	R	382	H	BGLR_HUMAN	Disease (MPS7)	---	A/B	R	382	H
24	UniProt	VAR_037927	P	408	S	BGLR_HUMAN	Disease (MPS7)	779091113	A/B	P	408	S
25	UniProt	VAR_037928	P	415	L	BGLR_HUMAN	Disease (MPS7)	751025746	A/B	P	415	L
26	UniProt	VAR_037929	R	435	P	BGLR_HUMAN	Disease (MPS7)	---	A/B	R	435	P
27	UniProt	VAR_037930	R	477	W	BGLR_HUMAN	Disease (MPS7)	774393243	A/B	R	477	W
28	UniProt	VAR_037931	Y	495	C	BGLR_HUMAN	Disease (MPS7)	121918178	A/B	Y	495	C
29	UniProt	VAR_037932	Y	508	C	BGLR_HUMAN	Disease (MPS7)	---	A/B	Y	508	C
30	UniProt	VAR_058518	E	540	K	BGLR_HUMAN	Disease (MPS7)	---	A/B	E	540	K
31	UniProt	VAR_037933	G	572	D	BGLR_HUMAN	Disease (MPS7)	---	A/B	G	572	D
32	UniProt	VAR_037934	R	577	L	BGLR_HUMAN	Disease (MPS7)	121918183	A/B	R	577	L
33	UniProt	VAR_037935	K	606	N	BGLR_HUMAN	Disease (MPS7)	---	A/B	K	606	N
34	UniProt	VAR_058519	G	607	A	BGLR_HUMAN	Disease (MPS7)	---	A/B	G	607	A
35	UniProt	VAR_003199	R	611	W	BGLR_HUMAN	Disease (MPS7)	121918176	A/B	R	611	W
36	UniProt	VAR_003200	A	619	V	BGLR_HUMAN	Disease (MPS7)	121918172	A/B	A	619	V
37	UniProt	VAR_037936	Y	626	H	BGLR_HUMAN	Disease (MPS7)	777613366	A/B	Y	626	H
38	UniProt	VAR_003201	W	627	C	BGLR_HUMAN	Disease (MPS7)	121918184	A/B	W	627	C

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GLYCOSYL_HYDROL_F2_1	PS00719	Glycosyl hydrolases family 2 signature 1.	BGLR_HUMAN	379-404	2	A:379-404 B:379-404
2	GLYCOSYL_HYDROL_F2_2	PS00608	Glycosyl hydrolases family 2 acid/base catalyst.	BGLR_HUMAN	437-451	2	A:437-451 B:437-451

Biological Unit 1 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	GLYCOSYL_HYDROL_F2_1	PS00719	Glycosyl hydrolases family 2 signature 1.	BGLR_HUMAN	379-404	4	A:379-404 B:379-404
2	GLYCOSYL_HYDROL_F2_2	PS00608	Glycosyl hydrolases family 2 acid/base catalyst.	BGLR_HUMAN	437-451	4	A:437-451 B:437-451

Asymmetric Unit (12, 24)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1a	ENST00000304895	1a	ENSE00001799401	chr7:65447301-65446961	341	BGLR_HUMAN	1-70	70	2	A:22-70 B:22-70	49 49
1.4b	ENST00000304895	4b	ENSE00001655605	chr7:65445396-65445211	186	BGLR_HUMAN	71-132	62	2	A:71-132 B:71-132	62 62
1.5b	ENST00000304895	5b	ENSE00001167655	chr7:65444898-65444714	185	BGLR_HUMAN	133-194	62	2	A:133-194 B:133-194	62 62
1.6c	ENST00000304895	6c	ENSE00001767586	chr7:65444528-65444386	143	BGLR_HUMAN	194-242	49	2	A:194-242 B:194-242	49 49
1.7a	ENST00000304895	7a	ENSE00001656522	chr7:65441189-65441002	188	BGLR_HUMAN	242-304	63	2	A:242-304 B:242-304	63 63
1.7e	ENST00000304895	7e	ENSE00001675526	chr7:65440058-65439906	153	BGLR_HUMAN	305-355	51	2	A:305-355 B:305-355	51 51
1.7h	ENST00000304895	7h	ENSE00001730820	chr7:65439691-65439513	179	BGLR_HUMAN	356-415	60	2	A:356-415 B:356-415	60 60
1.7l	ENST00000304895	7l	ENSE00001762203	chr7:65439428-65439282	147	BGLR_HUMAN	415-464	50	2	A:415-464 B:415-464	50 50
1.8	ENST00000304895	8	ENSE00001666571	chr7:65435353-65435269	85	BGLR_HUMAN	464-492	29	2	A:464-492 B:464-492	29 29
1.9b	ENST00000304895	9b	ENSE00001596760	chr7:65432894-65432718	177	BGLR_HUMAN	493-551	59	2	A:493-551 B:493-551	59 59
1.10b	ENST00000304895	10b	ENSE00001618495	chr7:65429445-65429310	136	BGLR_HUMAN	552-597	46	2	A:552-597 B:552-597	46 46
1.11d	ENST00000304895	11d	ENSE00001131491	chr7:65426050-65425671	380	BGLR_HUMAN	597-651	55	2	A:597-632 B:597-632	36 36

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:611
 aligned with BGLR_HUMAN | P08236 from UniProtKB/Swiss-Prot  Length:651

    Alignment length:611
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631 
           BGLR_HUMAN    22 GLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFEEQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE 632
               SCOP domains d1bhga2 A:22-225 beta-Glucuronidase                                                                                                                                                                         d1bhga1 A:226-328 beta-Glucuronidase                                                                   d1bhga3 A:329-632 beta-Glucuronidase, domain 3                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1bhgA01 A:22-224 Galactose-binding domain-like                                                                                                                                                             1bhgA02 A:225-328  [code=2.60.40.320, no name defined]                                                  1bhgA03 A:329-631 Glycosidases                                                                                                                                                                                                                                                                                 - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................eeeeeeee......hhhh..hhh..hhhh...eeeee..........hhhh....eeeeeeeee..........eeeeeee.....eeeee....eeeeee.....eee.............eeeeeeee...........eeeee...........eeeee.............eeeeeee.......eee..........eee.......eeeeeeeee.....eeeeee..........................eeeeeeeeee....eeeee..eee....eee....eee......eeeee.............hhhhhhhhhhhhhh...eee...................eeeee.........hhh.hhhhhhhhhhhhhhhhhh.....eeeee.........hhhhhhhhhhhhhhh....................hhhh..................hhhhhhhhhhhhhhhhhh....eee....................hhhhhhhhhhhhhhhhhh....eeeeeeee............................hhhhhhhhhhhhhhh. Sec.struct. author
             SAPs(SNPs) (1) --------S-------G-------------F-----------------------------------------------------------------------------------R-----------S-K-G-----------------------F---------------------------------------W--------------------------P----------------------------------------------------------------------------C------------------S----------NY--V-------N-L---------C-F-----C-------------------------S------L-------------------P-----------------------------------------W-----------------C------------C-------------------------------K-------------------------------D----L----------------------------NA---W-------V------HC----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----------------------------------------------------------------------------------------------------------------------------------N-----------------------------------------------------------------------------------------------------------------------------------------------------------------------S-------------------------------------------------------------H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F2_1      --------------------------------GLYCOSYL_HYDROL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: A:22-70 UniProt: 1-70            Exon 1.4b  PDB: A:71-132 UniProt: 71-132                      Exon 1.5b  PDB: A:133-194 UniProt: 133-194                    -----------------------------------------------Exon 1.7a  PDB: A:242-304 UniProt: 242-304                     Exon 1.7e  PDB: A:305-355 UniProt: 305-355         Exon 1.7h  PDB: A:356-415 UniProt: 356-415                  ------------------------------------------------Exon 1.8  PDB: A:464-492     Exon 1.9b  PDB: A:493-551 UniProt: 493-551                 Exon 1.10b  PDB: A:552-597 UniProt: 552-597   ----------------------------------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6c  PDB: A:194-242 UniProt: 194-242       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7l  PDB: A:415-464 UniProt: 415-464        ------------------------------------------------------------------------------------------------------------------------------------Exon 1.11d  PDB: A:597-632           Transcript 1 (2)
                 1bhg A  22 GLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFEEQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE 632
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631

Chain B from PDB  Type:PROTEIN  Length:611
 aligned with BGLR_HUMAN | P08236 from UniProtKB/Swiss-Prot  Length:651

    Alignment length:611
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631 
           BGLR_HUMAN    22 GLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFEEQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE 632
               SCOP domains d1bhgb2 B:22-225 beta-Glucuronidase                                                                                                                                                                         d1bhgb1 B:226-328 beta-Glucuronidase                                                                   d1bhgb3 B:329-632 beta-Glucuronidase, domain 3                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1bhgB01 B:22-224 Galactose-binding domain-like                                                                                                                                                             1bhgB02 B:225-328  [code=2.60.40.320, no name defined]                                                  1bhgB03 B:329-631 Glycosidases                                                                                                                                                                                                                                                                                 - CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................eeeeee........hhhh......hhhh...eeee....hhh.............eeeeeee...hhh.................eeeee....eeeeee......................eeeeeeee...........eeee...........eeee.............................eee........eee..........eeeeee........................................eeeeeee......eeeeeee......eee....eee......eeeee.............hhhhhhhhhhhhhh...eee........hhhhhhhhh..eeeee........hhhh.hhhhhhhhhhhhhhhhhh.......eee...........hhhhhhhhhhhhhh.........................eeeee...........hhhhhhhhhhhhhhhhhhh..eeeeee..................hhhhhhhhhhhhhhhhhh......eeeeee............................hhhhhhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) --------S-------G-------------F-----------------------------------------------------------------------------------R-----------S-K-G-----------------------F---------------------------------------W--------------------------P----------------------------------------------------------------------------C------------------S----------NY--V-------N-L---------C-F-----C-------------------------S------L-------------------P-----------------------------------------W-----------------C------------C-------------------------------K-------------------------------D----L----------------------------NA---W-------V------HC----- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----------------------------------------------------------------------------------------------------------------------------------N-----------------------------------------------------------------------------------------------------------------------------------------------------------------------S-------------------------------------------------------------H---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLYCOSYL_HYDROL_F2_1      --------------------------------GLYCOSYL_HYDROL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: B:22-70 UniProt: 1-70            Exon 1.4b  PDB: B:71-132 UniProt: 71-132                      Exon 1.5b  PDB: B:133-194 UniProt: 133-194                    -----------------------------------------------Exon 1.7a  PDB: B:242-304 UniProt: 242-304                     Exon 1.7e  PDB: B:305-355 UniProt: 305-355         Exon 1.7h  PDB: B:356-415 UniProt: 356-415                  ------------------------------------------------Exon 1.8  PDB: B:464-492     Exon 1.9b  PDB: B:493-551 UniProt: 493-551                 Exon 1.10b  PDB: B:552-597 UniProt: 552-597   ----------------------------------- Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6c  PDB: B:194-242 UniProt: 194-242       ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7l  PDB: B:415-464 UniProt: 415-464        ------------------------------------------------------------------------------------------------------------------------------------Exon 1.11d  PDB: B:597-632           Transcript 1 (2)
                 1bhg B  22 GLQGGMLYPQESPSRECKELDGLWSFRADFSDNRRRGFEEQWYRRPLWESGPTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGPLPSRLRITIAINNTLTPTTLPPGTIQYLTDTSKYPKGYFVQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNLFKLEVRLLDAENKVVANGTGTQGQLKVPGVSLWWPYLMHERPAYLYSLEVQLTAQTSLGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLALPQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKGAPYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIANE 632
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: Alpha-Beta Barrel (2994)

Topology: TIM Barrel (2806)

Homologous Superfamily: Glycosidases (843)

Human (Homo sapiens) (94)

1a	1bhgA03	A:329-631
1b	1bhgB03	B:329-631

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Immunoglobulin-like (3897)

Homologous Superfamily: [code=2.60.40.320, no name defined] (46)

Human (Homo sapiens) (2)

2a	1bhgA02	A:225-328
2b	1bhgB02	B:225-328

Topology: Jelly Rolls (1293)

Homologous Superfamily: Galactose-binding domain-like (195)

Human (Homo sapiens) (39)

3a	1bhgA01	A:22-224
3b	1bhgB01	B:22-224

(no "Pfam Domain" information available for 1BHG)

Asymmetric Unit(hide GO term definitions)

Chain A,B (BGLR_HUMAN | P08236)

molecular function
	GO:0004566	beta-glucuronidase activity	Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0016798	hydrolase activity, acting on glycosyl bonds	Catalysis of the hydrolysis of any glycosyl bond.
	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Catalysis of the hydrolysis of any O-glycosyl bond.
	GO:0019904	protein domain specific binding	Interacting selectively and non-covalently with a specific domain of a protein.
	GO:0005102	receptor binding	Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
biological process
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0006027	glycosaminoglycan catabolic process	The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars.
	GO:0030214	hyaluronan catabolic process	The chemical reactions and pathways resulting in the breakdown of hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:0043231	intracellular membrane-bounded organelle	Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
	GO:0043202	lysosomal lumen	The volume enclosed within the lysosomal membrane.
	GO:0005764	lysosome	A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Asymmetric Unit
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		Val A:79 - Pro A:80	[ RasMol ]
		Val B:79 - Pro B:80	[ RasMol ]

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	1bhg
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	3.2.1.31
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	BGLR_HUMAN \| P08236	:	3hn3

(no "Related Entries Specified in the PDB File" available for 1BHG)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 18)

Sites (18, 18)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (38, 76)

PROSITE Motifs (2, 4)

Exons (12, 24)

Sequences/Alignments

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SCOP Domains (3, 6)

CATH Domains (3, 6)

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