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(-) Description

Title :  STRUCTURAL STUDIES OF THE BINDING OF THE ANTI-ULCER DRUG SUCROSE OCTASULFATE TO ACIDIC FIBROBLAST GROWTH FACTOR
 
Authors :  X. Zhu, B. T. Hsu, D. C. Rees
Date :  13 Jul 93  (Deposition) - 31 Oct 93  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  G  (1x)
Biol. Unit 8:  H  (1x)
Keywords :  Growth Factor (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  X. Zhu, B. T. Hsu, D. C. Rees
Structural Studies Of The Binding Of The Anti-Ulcer Drug Sucrose Octasulfate To Acidic Fibroblast Growth Factor.
Structure V. 1 27 1993
PubMed-ID: 7520817  |  Reference-DOI: 10.1016/0969-2126(93)90006-3
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ACIDIC FIBROBLAST GROWTH FACTOR
    ChainsA, B, C, D, E, F, G, H
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    Organism CommonCATTLE
    Organism ScientificBOS TAURUS
    Organism Taxid9913

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)A       
Biological Unit 2 (1x) B      
Biological Unit 3 (1x)  C     
Biological Unit 4 (1x)   D    
Biological Unit 5 (1x)    E   
Biological Unit 6 (1x)     F  
Biological Unit 7 (1x)      G 
Biological Unit 8 (1x)       H

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 8)

Asymmetric Unit (1, 8)
No.NameCountTypeFull Name
1SCR8Ligand/IonSUCROSE OCTASULFATE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 7 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE
Biological Unit 8 (1, 1)
No.NameCountTypeFull Name
1SCR1Ligand/IonSUCROSE OCTASULFATE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:112 , LYS A:113 , ASN A:114 , ARG A:116 , LYS A:118 , ARG A:122 , HIS A:124 , GLN A:127BINDING SITE FOR RESIDUE SCR A 141
2AC2SOFTWARELYS B:112 , LYS B:113 , ASN B:114 , ARG B:116 , LYS B:118 , ARG B:122 , GLN B:127 , PRO E:136BINDING SITE FOR RESIDUE SCR B 141
3AC3SOFTWAREASN C:18 , LYS C:112 , LYS C:113 , LYS C:118 , ARG C:122 , GLN C:127 , PRO F:136BINDING SITE FOR RESIDUE SCR C 141
4AC4SOFTWAREASN D:18 , LYS D:112 , LYS D:113 , ASN D:114 , ARG D:116 , LYS D:118 , ARG D:122 , PRO G:136BINDING SITE FOR RESIDUE SCR D 141
5AC5SOFTWARELYS D:12 , PRO D:134 , PRO D:136 , ASN E:18 , LYS E:112 , LYS E:113 , ASN E:114 , LYS E:118 , ARG E:122 , GLN E:127BINDING SITE FOR RESIDUE SCR E 141
6AC6SOFTWAREHIS A:93 , LYS F:112 , LYS F:113 , ASN F:114 , ARG F:116 , LYS F:118 , ARG F:122 , GLN F:127BINDING SITE FOR RESIDUE SCR F 141
7AC7SOFTWARELYS B:12 , LYS G:112 , LYS G:113 , ASN G:114 , ARG G:116 , LYS G:118 , ARG G:122 , GLN G:127BINDING SITE FOR RESIDUE SCR G 141
8AC8SOFTWARELYS H:112 , LYS H:113 , ASN H:114 , LYS H:118 , ARG H:122 , GLN H:127BINDING SITE FOR RESIDUE SCR H 141

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1AFC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1AFC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1AFC)

(-) PROSITE Motifs  (1, 8)

Asymmetric Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  8A:71-94
B:71-94
C:71-94
D:71-94
E:71-94
F:71-94
G:71-94
H:71-94
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1A:71-94
-
-
-
-
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
B:71-94
-
-
-
-
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
-
C:71-94
-
-
-
-
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
-
-
D:71-94
-
-
-
-
Biological Unit 5 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
-
-
-
E:71-94
-
-
-
Biological Unit 6 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
-
-
-
-
F:71-94
-
-
Biological Unit 7 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
-
-
-
-
-
G:71-94
-
Biological Unit 8 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HBGF_FGFPS00247 HBGF/FGF family signature.FGF1_BOVIN86-109
 
 
 
 
 
 
 
  1-
-
-
-
-
-
-
H:71-94

(-) Exons   (3, 24)

Asymmetric Unit (3, 24)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENSBTAT000000430561ENSBTAE00000317817chr7:53213331-53212944388FGF1_BOVIN-00--
1.3ENSBTAT000000430563ENSBTAE00000054905chr7:53130074-53129872203FGF1_BOVIN1-57578A:10-42
B:10-42
C:10-42
D:10-42
E:10-42
F:10-42
G:10-42
H:10-42
33
33
33
33
33
33
33
33
1.4ENSBTAT000000430564ENSBTAE00000054911chr7:53116494-53116391104FGF1_BOVIN57-91358A:42-76
B:42-76
C:42-76
D:42-76
E:42-76
F:42-76
G:42-76
H:42-76
35
35
35
35
35
35
35
35
1.5aENSBTAT000000430565aENSBTAE00000317816chr7:53109571-53109317255FGF1_BOVIN92-155648A:77-136
B:77-136
C:77-136
D:77-136
E:77-136
F:77-136
G:77-136
H:77-136
60
60
60
60
60
60
60
60

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afca_ A: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcA00 A:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.....eeee.....eeee....hhhh.eee.........eee.....eeee.....eeee...hhhhh...ee.....ee.......................hhhh........eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: A:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: A:10-42           ----------------------------------Exon 1.5a  PDB: A:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: A:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc A  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain B from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afcb_ B: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcB00 B:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.......eee...eee..........eeeeeeee..eeeeee.....eeee.....eeee........eeeee.....eeeee.hhh...............hhhhh........eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: B:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: B:10-42           ----------------------------------Exon 1.5a  PDB: B:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: B:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc B  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain C from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afcc_ C: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcC00 C:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.....eeee.....eeee........eee.......ee..ee.....eeee.....eeee...hhhh.eee.......eeeee....................hhhh.......eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: C:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: C:10-42           ----------------------------------Exon 1.5a  PDB: C:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: C:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc C  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain D from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afcd_ D: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcD00 D:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee.......eeeee...eeeee.........eeee.....eeeeee.....eeee.....eeee........ee...........ee...................hhhhh..........ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: D:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: D:10-42           ----------------------------------Exon 1.5a  PDB: D:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: D:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc D  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain E from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afce_ E: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcE00 E:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee....eeeeee...eeeee.........eee.........eee.....eeee.....eeee...hhhh.eee.........eee....................hhhh........eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: E:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: E:10-42           ----------------------------------Exon 1.5a  PDB: E:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: E:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc E  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain F from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afcf_ F: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcF00 F:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.....eeee.....eeee....hhhh.ee...........ee.....eeee.....eeee...hhhh.eee.........eee...................hhhhh........eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: F:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: F:10-42           ----------------------------------Exon 1.5a  PDB: F:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: F:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc F  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain G from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afcg_ G: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcG00 G:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee........eee.....eee.....hhhh.ee...........ee.....................hhhh.ee...........ee...................hhhhh..........ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: G:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: G:10-42           ----------------------------------Exon 1.5a  PDB: G:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: G:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc G  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

Chain H from PDB  Type:PROTEIN  Length:127
 aligned with FGF1_BOVIN | P03968 from UniProtKB/Swiss-Prot  Length:155

    Alignment length:127
                                    34        44        54        64        74        84        94       104       114       124       134       144       
           FGF1_BOVIN    25 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLCAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 151
               SCOP domains d1afch_ H: Acidic FGF (FGF1)                                                                                                    SCOP domains
               CATH domains 1afcH00 H:10-136  [code=2.80.10.50, no name defined]                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee.....eeee.....eeee....hhhh.eee.........eee.....eeee.....eeee...hhhhh...................................hhhh...hhhh.eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------HBGF_FGF  PDB: H:71-94  ------------------------------------------ PROSITE
           Transcript 1 (1) Exon 1.3  PDB: H:10-42           ----------------------------------Exon 1.5a  PDB: H:77-136 UniProt: 92-155 [INCOMPLETE]        Transcript 1 (1)
           Transcript 1 (2) --------------------------------Exon 1.4  PDB: H:42-76             ------------------------------------------------------------ Transcript 1 (2)
                 1afc H  10 KPKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKHWFVGLKKNGRSKLGPRTHFGQKAILFLPLP 136
                                    19        29        39        49        59        69        79        89        99       109       119       129       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
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 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit

(-) CATH Domains  (1, 8)

Asymmetric Unit
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1AFC)

(-) Gene Ontology  (40, 40)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (FGF1_BOVIN | P03968)
molecular function
    GO:0044548    S100 protein binding    Interacting selectively and non-covalently with a S100 protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS.
    GO:0005104    fibroblast growth factor receptor binding    Interacting selectively and non-covalently with the fibroblast growth factor receptor (FGFR).
    GO:0008083    growth factor activity    The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation.
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0005178    integrin binding    Interacting selectively and non-covalently with an integrin.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0005102    receptor binding    Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
biological process
    GO:0000187    activation of MAPK activity    The initiation of the activity of the inactive enzyme MAP kinase (MAPK).
    GO:0032148    activation of protein kinase B activity    Any process that initiates the activity of the inactive enzyme protein kinase B.
    GO:0001525    angiogenesis    Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
    GO:0060681    branch elongation involved in ureteric bud branching    The growth of a branch of the ureteric bud along its axis.
    GO:0030154    cell differentiation    The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
    GO:0034605    cellular response to heat    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
    GO:0008543    fibroblast growth factor receptor signaling pathway    The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.
    GO:0030324    lung development    The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.
    GO:0072163    mesonephric epithelium development    The process whose specific outcome is the progression of an epithelium in the mesonephros over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.
    GO:0007275    multicellular organism development    The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
    GO:0001759    organ induction    The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ.
    GO:0043406    positive regulation of MAP kinase activity    Any process that activates or increases the frequency, rate or extent of MAP kinase activity.
    GO:0045766    positive regulation of angiogenesis    Any process that activates or increases angiogenesis.
    GO:0051781    positive regulation of cell division    Any process that activates or increases the frequency, rate or extent of cell division.
    GO:0030335    positive regulation of cell migration    Any process that activates or increases the frequency, rate or extent of cell migration.
    GO:0008284    positive regulation of cell proliferation    Any process that activates or increases the rate or extent of cell proliferation.
    GO:0045542    positive regulation of cholesterol biosynthetic process    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol.
    GO:0010595    positive regulation of endothelial cell migration    Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
    GO:0050679    positive regulation of epithelial cell proliferation    Any process that activates or increases the rate or extent of epithelial cell proliferation.
    GO:1902533    positive regulation of intracellular signal transduction    Any process that activates or increases the frequency, rate or extent of intracellular signal transduction.
    GO:0001934    positive regulation of protein phosphorylation    Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.
    GO:1903672    positive regulation of sprouting angiogenesis    Any process that activates or increases the frequency, rate or extent of sprouting angiogenesis.
    GO:0045944    positive regulation of transcription from RNA polymerase II promoter    Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
    GO:2000544    regulation of endothelial cell chemotaxis to fibroblast growth factor    Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.
    GO:1901509    regulation of endothelial tube morphogenesis    Any process that modulates the frequency, rate or extent of endothelial tube morphogenesis.
cellular component
    GO:0005938    cell cortex    The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0005578    proteinaceous extracellular matrix    A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. An example of this component is found in Mus musculus.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        FGF1_BOVIN | P039681bar

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