Chain A from PDB Type:PROTEIN Length:205
aligned with NARL_ECO57 | P0AF30 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_ECO57 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04a2 A:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04a1 A:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04A01 A:5-128 [code=3.40.50.2300, no name defined] 1a04A02 A:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---RESPONSE_REGULATORY PDB: A:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (1) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: A:150-214 UniProt: 149-214 -- PROSITE (1)
PROSITE (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
PROSITE (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: A:170-197 ------------------- PROSITE (5)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 A 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain A from PDB Type:PROTEIN Length:205
aligned with NARL_ECOL6 | P0AF29 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_ECOL6 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04a2 A:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04a1 A:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04A01 A:5-128 [code=3.40.50.2300, no name defined] 1a04A02 A:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: A:150-214 UniProt: 149-214 -- PROSITE (2)
PROSITE (3) ---RESPONSE_REGULATORY PDB: A:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
PROSITE (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
PROSITE (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
PROSITE (7) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: A:170-197 ------------------- PROSITE (7)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 A 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain A from PDB Type:PROTEIN Length:205
aligned with NARL_ECOLI | P0AF28 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_ECOLI 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04a2 A:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04a1 A:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04A01 A:5-128 [code=3.40.50.2300, no name defined] 1a04A02 A:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---RESPONSE_REGULATORY PDB: A:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: A:150-214 UniProt: 149-214 -- PROSITE (4)
PROSITE (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
PROSITE (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
PROSITE (7) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (7)
PROSITE (8) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: A:170-197 ------------------- PROSITE (8)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 A 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain A from PDB Type:PROTEIN Length:205
aligned with NARL_SHIFL | P0AF31 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_SHIFL 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04a2 A:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04a1 A:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04A01 A:5-128 [code=3.40.50.2300, no name defined] 1a04A02 A:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhhh...hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: A:150-214 UniProt: 149-214 -- PROSITE (3)
PROSITE (4) ---RESPONSE_REGULATORY PDB: A:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (4)
PROSITE (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
PROSITE (6) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: A:170-197 ------------------- PROSITE (6)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 A 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain B from PDB Type:PROTEIN Length:205
aligned with NARL_ECO57 | P0AF30 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_ECO57 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04b2 B:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04b1 B:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04B01 B:5-128 [code=3.40.50.2300, no name defined] 1a04B02 B:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---RESPONSE_REGULATORY PDB: B:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (1) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: B:150-214 UniProt: 149-214 -- PROSITE (1)
PROSITE (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
PROSITE (5) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: B:170-197 ------------------- PROSITE (5)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 B 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain B from PDB Type:PROTEIN Length:205
aligned with NARL_ECOL6 | P0AF29 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_ECOL6 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04b2 B:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04b1 B:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04B01 B:5-128 [code=3.40.50.2300, no name defined] 1a04B02 B:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: B:150-214 UniProt: 149-214 -- PROSITE (2)
PROSITE (3) ---RESPONSE_REGULATORY PDB: B:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (4)
PROSITE (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
PROSITE (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
PROSITE (7) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: B:170-197 ------------------- PROSITE (7)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 B 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain B from PDB Type:PROTEIN Length:205
aligned with NARL_ECOLI | P0AF28 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_ECOLI 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04b2 B:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04b1 B:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04B01 B:5-128 [code=3.40.50.2300, no name defined] 1a04B02 B:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) ---RESPONSE_REGULATORY PDB: B:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (3)
PROSITE (4) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: B:150-214 UniProt: 149-214 -- PROSITE (4)
PROSITE (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
PROSITE (6) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (6)
PROSITE (7) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (7)
PROSITE (8) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: B:170-197 ------------------- PROSITE (8)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 B 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Chain B from PDB Type:PROTEIN Length:205
aligned with NARL_SHIFL | P0AF31 from UniProtKB/Swiss-Prot Length:216
Alignment length:212
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214
NARL_SHIFL 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
SCOP domains d1a04b2 B:5-142 Nitrate/nitrite response regulator (NarL), receiver domain -------d1a04b1 B:150-216 Nitrate/nitrite response regulator (NarL) SCOP domains
CATH domains 1a04B01 B:5-128 [code=3.40.50.2300, no name defined] 1a04B02 B:129- 215 'winged helix' repressor DNA binding domain - CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee...hhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeee.......hhhhhhhhhh.....eeeeee....hhhhhhhhh....eeee....hhhhhhhhhhhhh......hhhhhhhhhh.-------...hhh..hhhhhhhhhhh....hhhhhhh....hhhhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_2 PDB: B:150-214 UniProt: 149-214 -- PROSITE (3)
PROSITE (4) ---RESPONSE_REGULATORY PDB: B:8-124 UniProt: 8-124 -------------------------------------------------------------------------------------------- PROSITE (4)
PROSITE (5) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (5)
PROSITE (6) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------HTH_LUXR_1 PDB: B:170-197 ------------------- PROSITE (6)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1a04 B 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL-------ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216
14 24 34 44 54 64 74 84 94 104 114 124 134 | - | 154 164 174 184 194 204 214
142 150
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |