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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN DIHYDROLIPOAMIDE DEHYDROGENASE COMPLEXED TO NADH
 
Authors :  C. A. Brautigam, J. L. Chuang, D. R. Tomchick, M. Machius, D. T. Chuang
Date :  10 May 05  (Deposition) - 28 Jun 05  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.08
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  E3, Lipoamide Dehydrogenase, Pyruvate Dehydrogenase, Alpha- Ketoglutarate Dehydrogenase, Branched-Chain Alpha-Ketoacid Dehydrogenase, Glycine Decarboxylase, Glycine Cleavage, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. A. Brautigam, J. L. Chuang, D. R. Tomchick, M. Machius, D. T. Chuang
Crystal Structure Of Human Dihydrolipoamide Dehydrogenase: Nad+/Nadh Binding And The Structural Basis Of Disease-Causing Mutations
J. Mol. Biol. V. 350 543 2005
PubMed-ID: 15946682  |  Reference-DOI: 10.1016/J.JMB.2005.05.014
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DIHYDROLIPOYL DEHYDROGENASE
    ChainsA, B, C, D, E, F, G, H
    EC Number1.8.1.4
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPLASMID
    Expression System StrainXL1-BLUE
    Expression System Taxid562
    Expression System Vector TypePTRCHISTHE3
    GeneDLD, GCSL, LAD, PHE3
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymDIHYDROLIPOAMIDE DEHYDROGENASE, GLYCINE CLEAVAGE SYSTEM L PROTEIN

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFGH
Biological Unit 1 (1x)AB      
Biological Unit 2 (1x)  CD    
Biological Unit 3 (1x)    EF  
Biological Unit 4 (1x)      GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 47)

Asymmetric Unit (3, 47)
No.NameCountTypeFull Name
1FAD8Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2NAI8Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3SO431Ligand/IonSULFATE ION
Biological Unit 1 (3, 11)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2NAI2Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3SO47Ligand/IonSULFATE ION
Biological Unit 2 (3, 12)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2NAI2Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3SO48Ligand/IonSULFATE ION
Biological Unit 3 (3, 12)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2NAI2Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3SO48Ligand/IonSULFATE ION
Biological Unit 4 (3, 12)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2NAI2Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
3SO48Ligand/IonSULFATE ION

(-) Sites  (47, 47)

Asymmetric Unit (47, 47)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:64 , GLY A:68 , THR A:69BINDING SITE FOR RESIDUE SO4 A 2000
02AC2SOFTWARETHR A:284 , ASN A:286 , LEU A:287 , GLY A:288 , LEU A:289 , GLU A:290 , GLU A:291 , HOH A:2055BINDING SITE FOR RESIDUE SO4 A 2001
03AC3SOFTWAREARG A:299 , ARG A:301 , GLY A:324 , HOH A:2114BINDING SITE FOR RESIDUE SO4 A 2002
04AC4SOFTWAREHIS B:64 , GLY B:68 , THR B:69BINDING SITE FOR RESIDUE SO4 B 2003
05AC5SOFTWAREASN B:286 , LEU B:287 , GLY B:288 , LEU B:289 , GLU B:290 , HOH B:2100BINDING SITE FOR RESIDUE SO4 B 2004
06AC6SOFTWARELYS A:111 , ILE B:379 , GLU B:380 , GLN B:409 , HOH B:2036BINDING SITE FOR RESIDUE SO4 B 2005
07AC7SOFTWAREARG B:299 , ARG B:301 , ALA B:323 , GLY B:324BINDING SITE FOR RESIDUE SO4 B 2006
08AC8SOFTWAREHIS C:64 , GLY C:68 , THR C:69BINDING SITE FOR RESIDUE SO4 C 2007
09AC9SOFTWAREASN C:286 , LEU C:287 , GLY C:288 , LEU C:289 , GLU C:290BINDING SITE FOR RESIDUE SO4 C 2008
10BC1SOFTWAREILE C:379 , GLU C:380 , GLN C:409 , HOH C:2044 , LYS D:111BINDING SITE FOR RESIDUE SO4 C 2009
11BC2SOFTWAREARG C:299 , ARG C:301 , ALA C:323 , GLY C:324BINDING SITE FOR RESIDUE SO4 C 2010
12BC3SOFTWAREHIS D:64 , GLY D:68 , THR D:69 , HOH D:2037BINDING SITE FOR RESIDUE SO4 D 2011
13BC4SOFTWARETHR D:284 , ASN D:286 , LEU D:287 , GLY D:288 , LEU D:289 , GLU D:290 , GLU D:291 , HOH D:2174 , HOH D:2205BINDING SITE FOR RESIDUE SO4 D 2012
14BC5SOFTWAREGLY D:378 , ILE D:379 , GLU D:380 , GLN D:409BINDING SITE FOR RESIDUE SO4 D 2013
15BC6SOFTWAREARG D:299 , ARG D:301 , ALA D:323 , GLY D:324BINDING SITE FOR RESIDUE SO4 D 2014
16BC7SOFTWAREHIS E:64 , GLY E:68 , THR E:69 , HOH E:2052BINDING SITE FOR RESIDUE SO4 E 2015
17BC8SOFTWARETHR E:284 , ASN E:286 , LEU E:287 , GLY E:288 , LEU E:289 , GLU E:290BINDING SITE FOR RESIDUE SO4 E 2016
18BC9SOFTWAREGLY E:378 , ILE E:379 , GLU E:380 , GLN E:409 , HOH E:2057 , HOH E:2121 , HOH E:2122 , LYS F:111BINDING SITE FOR RESIDUE SO4 E 2017
19CC1SOFTWAREARG E:299 , ARG E:301 , ALA E:323 , GLY E:324 , HOH E:2063BINDING SITE FOR RESIDUE SO4 E 2018
20CC2SOFTWAREHIS F:64 , GLY F:68 , THR F:69 , HOH F:2079BINDING SITE FOR RESIDUE SO4 F 2019
21CC3SOFTWARETHR F:284 , LEU F:287 , GLY F:288 , LEU F:289 , GLU F:290 , GLU F:291 , HOH F:2291 , HOH F:2304BINDING SITE FOR RESIDUE SO4 F 2020
22CC4SOFTWAREGLY F:378 , ILE F:379 , GLU F:380 , GLN F:409BINDING SITE FOR RESIDUE SO4 F 2021
23CC5SOFTWAREARG F:299 , ARG F:301 , LYS G:265BINDING SITE FOR RESIDUE SO4 F 2022
24CC6SOFTWAREHIS G:64 , GLY G:68 , THR G:69 , HOH G:2080BINDING SITE FOR RESIDUE SO4 G 2023
25CC7SOFTWARETHR G:284 , ASN G:286 , LEU G:287 , GLY G:288 , LEU G:289 , GLU G:290 , GLU G:291 , HOH G:2220BINDING SITE FOR RESIDUE SO4 G 2024
26CC8SOFTWAREILE G:379 , GLU G:380 , GLN G:409BINDING SITE FOR RESIDUE SO4 G 2025
27CC9SOFTWARELYS F:265 , ARG G:299BINDING SITE FOR RESIDUE SO4 G 2026
28DC1SOFTWAREHIS H:64 , GLY H:68 , THR H:69 , HOH H:2069 , HOH H:2190BINDING SITE FOR RESIDUE SO4 H 2027
29DC2SOFTWAREASN H:286 , LEU H:287 , GLY H:288 , LEU H:289 , GLU H:290 , GLU H:291 , HOH H:2281BINDING SITE FOR RESIDUE SO4 H 2028
30DC3SOFTWARELYS G:111 , ILE H:379 , GLU H:380 , GLN H:409 , HOH H:2071BINDING SITE FOR RESIDUE SO4 H 2029
31DC4SOFTWAREARG H:299 , ARG H:301 , ALA H:323 , GLY H:324BINDING SITE FOR RESIDUE SO4 H 2030
32DC5SOFTWAREILE A:12 , GLY A:13 , SER A:14 , GLY A:15 , PRO A:16 , GLY A:17 , GLU A:36 , LYS A:37 , ASN A:38 , GLY A:43 , THR A:44 , CYS A:45 , GLY A:49 , CYS A:50 , LYS A:54 , GLY A:117 , TYR A:118 , GLY A:119 , ALA A:147 , THR A:148 , GLY A:149 , SER A:150 , SER A:168 , ARG A:280 , PHE A:283 , GLY A:319 , ASP A:320 , MET A:326 , LEU A:327 , ALA A:328 , HIS A:329 , TYR A:359 , NAI A:481 , HOH A:2003 , HOH A:2005 , HOH A:2012 , HOH A:2016 , HIS B:452BINDING SITE FOR RESIDUE FAD A 480
33DC6SOFTWAREPHE A:155 , ILE A:184 , GLY A:185 , GLY A:187 , VAL A:188 , ILE A:189 , GLU A:192 , VAL A:207 , GLU A:208 , PHE A:209 , LEU A:210 , CYS A:277 , ILE A:278 , GLY A:279 , ARG A:280 , MET A:326 , LEU A:327 , VAL A:357 , TYR A:359 , FAD A:480 , HOH A:2042 , HOH A:2045 , HOH A:2097BINDING SITE FOR RESIDUE NAI A 481
34DC7SOFTWAREHIS A:452 , PRO A:453 , ILE B:12 , GLY B:13 , GLY B:15 , PRO B:16 , GLY B:17 , ILE B:35 , GLU B:36 , LYS B:37 , ASN B:38 , GLY B:43 , THR B:44 , CYS B:45 , VAL B:48 , GLY B:49 , CYS B:50 , SER B:53 , LYS B:54 , GLY B:117 , TYR B:118 , GLY B:119 , ALA B:147 , THR B:148 , GLY B:149 , SER B:150 , SER B:168 , GLY B:319 , ASP B:320 , MET B:326 , LEU B:327 , ALA B:328 , HIS B:329 , TYR B:359 , NAI B:481 , HOH B:2021 , HOH B:2045 , HOH B:2123BINDING SITE FOR RESIDUE FAD B 480
35DC8SOFTWAREGLY B:185 , GLY B:187 , VAL B:188 , ILE B:189 , GLU B:192 , GLU B:208 , PHE B:209 , LEU B:210 , CYS B:277 , ILE B:278 , GLY B:279 , MET B:326 , LEU B:327 , VAL B:357 , TYR B:359 , FAD B:480 , HOH B:2022 , HOH B:2056 , HOH B:2057 , HOH B:2063 , HOH B:2064 , HOH B:2094 , HOH B:2108BINDING SITE FOR RESIDUE NAI B 481
36DC9SOFTWAREILE C:12 , GLY C:13 , GLY C:15 , PRO C:16 , GLY C:17 , ILE C:35 , GLU C:36 , LYS C:37 , ASN C:38 , GLY C:43 , THR C:44 , CYS C:45 , VAL C:48 , GLY C:49 , CYS C:50 , SER C:53 , LYS C:54 , GLY C:117 , TYR C:118 , GLY C:119 , ALA C:147 , THR C:148 , GLY C:149 , SER C:150 , SER C:168 , ILE C:189 , ARG C:280 , PHE C:283 , GLY C:319 , ASP C:320 , MET C:326 , LEU C:327 , ALA C:328 , HIS C:329 , TYR C:359 , NAI C:481 , HOH C:2020 , HOH C:2026 , HOH C:2054 , HIS D:452 , PRO D:453BINDING SITE FOR RESIDUE FAD C 480
37EC1SOFTWAREGLY C:185 , GLY C:187 , VAL C:188 , ILE C:189 , GLU C:192 , GLU C:208 , PHE C:209 , LEU C:210 , CYS C:277 , ILE C:278 , GLY C:279 , ARG C:280 , MET C:326 , VAL C:357 , TYR C:359 , FAD C:480 , HOH C:2050 , HOH C:2052 , HOH C:2058 , HOH C:2060 , HOH C:2077 , HOH C:2107 , HOH C:2109 , HOH C:2196BINDING SITE FOR RESIDUE NAI C 481
38EC2SOFTWAREHIS C:452 , ILE D:12 , GLY D:13 , SER D:14 , GLY D:15 , PRO D:16 , GLY D:17 , GLU D:36 , LYS D:37 , ASN D:38 , GLY D:43 , THR D:44 , CYS D:45 , VAL D:48 , GLY D:49 , CYS D:50 , SER D:53 , LYS D:54 , GLY D:117 , TYR D:118 , GLY D:119 , ALA D:147 , THR D:148 , GLY D:149 , SER D:150 , SER D:168 , ARG D:280 , PHE D:283 , GLY D:319 , ASP D:320 , MET D:326 , LEU D:327 , ALA D:328 , HIS D:329 , TYR D:359 , NAI D:481 , HOH D:2015 , HOH D:2018 , HOH D:2026 , HOH D:2080BINDING SITE FOR RESIDUE FAD D 480
39EC3SOFTWAREPHE D:155 , GLY D:185 , GLY D:187 , VAL D:188 , ILE D:189 , GLU D:192 , VAL D:207 , GLU D:208 , PHE D:209 , LEU D:210 , CYS D:277 , ILE D:278 , GLY D:279 , MET D:326 , VAL D:357 , TYR D:359 , FAD D:480 , HOH D:2085 , HOH D:2086 , HOH D:2096 , HOH D:2199 , HOH D:2200BINDING SITE FOR RESIDUE NAI D 481
40EC4SOFTWAREILE E:12 , GLY E:13 , SER E:14 , GLY E:15 , PRO E:16 , GLY E:17 , GLU E:36 , LYS E:37 , ASN E:38 , GLY E:43 , THR E:44 , CYS E:45 , VAL E:48 , GLY E:49 , CYS E:50 , SER E:53 , LYS E:54 , TYR E:118 , GLY E:119 , ALA E:147 , THR E:148 , GLY E:149 , SER E:150 , SER E:168 , ILE E:189 , PHE E:283 , GLY E:319 , ASP E:320 , MET E:326 , LEU E:327 , ALA E:328 , HIS E:329 , TYR E:359 , NAI E:481 , HOH E:2021 , HOH E:2024 , HOH E:2243 , HOH E:2248 , HIS F:452 , PRO F:453BINDING SITE FOR RESIDUE FAD E 480
41EC5SOFTWAREGLY E:185 , GLY E:187 , VAL E:188 , ILE E:189 , GLU E:192 , GLU E:208 , PHE E:209 , LEU E:210 , CYS E:277 , ILE E:278 , GLY E:279 , ARG E:280 , MET E:326 , LEU E:327 , VAL E:357 , TYR E:359 , FAD E:480 , HOH E:2043 , HOH E:2048 , HOH E:2071 , HOH E:2075 , HOH E:2091 , HOH E:2129 , HOH E:2140 , HOH E:2241 , HOH E:2242BINDING SITE FOR RESIDUE NAI E 481
42EC6SOFTWAREHIS E:452 , PRO E:453 , ILE F:12 , GLY F:13 , SER F:14 , GLY F:15 , PRO F:16 , GLY F:17 , GLU F:36 , LYS F:37 , ASN F:38 , GLY F:43 , THR F:44 , CYS F:45 , VAL F:48 , GLY F:49 , CYS F:50 , SER F:53 , LYS F:54 , GLY F:117 , TYR F:118 , GLY F:119 , ALA F:147 , THR F:148 , GLY F:149 , SER F:150 , SER F:168 , ARG F:280 , PHE F:283 , GLY F:319 , ASP F:320 , MET F:326 , LEU F:327 , ALA F:328 , HIS F:329 , ALA F:331 , TYR F:359 , NAI F:481 , HOH F:2023 , HOH F:2024 , HOH F:2035 , HOH F:2218BINDING SITE FOR RESIDUE FAD F 480
43EC7SOFTWAREPHE F:155 , ILE F:184 , GLY F:185 , GLY F:187 , VAL F:188 , ILE F:189 , GLU F:192 , GLU F:208 , PHE F:209 , CYS F:277 , ILE F:278 , GLY F:279 , ARG F:280 , MET F:326 , LEU F:327 , VAL F:357 , TYR F:359 , FAD F:480 , HOH F:2095 , HOH F:2098 , HOH F:2147 , HOH F:2170 , HOH F:2172 , HOH F:2194 , HOH F:2196 , HOH F:2307 , SER G:262BINDING SITE FOR RESIDUE NAI F 481
44EC8SOFTWAREILE G:12 , GLY G:13 , SER G:14 , GLY G:15 , PRO G:16 , GLY G:17 , GLU G:36 , LYS G:37 , ASN G:38 , GLY G:43 , THR G:44 , CYS G:45 , VAL G:48 , GLY G:49 , CYS G:50 , SER G:53 , LYS G:54 , GLY G:117 , TYR G:118 , GLY G:119 , ALA G:147 , THR G:148 , GLY G:149 , SER G:150 , SER G:168 , ARG G:280 , PHE G:283 , GLY G:319 , ASP G:320 , MET G:326 , LEU G:327 , ALA G:328 , HIS G:329 , TYR G:359 , NAI G:481 , HOH G:2027 , HOH G:2028 , HOH G:2055 , HOH G:2166 , HIS H:452BINDING SITE FOR RESIDUE FAD G 480
45EC9SOFTWAREPHE G:155 , GLY G:185 , GLY G:187 , VAL G:188 , ILE G:189 , GLU G:192 , VAL G:207 , GLU G:208 , PHE G:209 , LEU G:210 , THR G:241 , VAL G:243 , CYS G:277 , ILE G:278 , GLY G:279 , ARG G:280 , MET G:326 , LEU G:327 , VAL G:357 , TYR G:359 , FAD G:480 , HOH G:2089 , HOH G:2093 , HOH G:2162 , HOH G:2203 , HOH G:2336 , HOH G:2338 , HOH G:2341BINDING SITE FOR RESIDUE NAI G 481
46FC1SOFTWAREHIS G:452 , PRO G:453 , ILE H:12 , GLY H:13 , SER H:14 , GLY H:15 , PRO H:16 , GLY H:17 , GLU H:36 , LYS H:37 , ASN H:38 , GLY H:43 , THR H:44 , CYS H:45 , VAL H:48 , GLY H:49 , CYS H:50 , SER H:53 , LYS H:54 , GLY H:117 , TYR H:118 , GLY H:119 , ALA H:147 , THR H:148 , GLY H:149 , SER H:150 , SER H:168 , PHE H:283 , GLY H:319 , ASP H:320 , MET H:326 , LEU H:327 , ALA H:328 , HIS H:329 , TYR H:359 , NAI H:481 , HOH H:2031 , HOH H:2036 , HOH H:2095 , HOH H:2207BINDING SITE FOR RESIDUE FAD H 480
47FC2SOFTWAREGLY H:185 , GLY H:187 , VAL H:188 , ILE H:189 , GLU H:192 , GLU H:208 , PHE H:209 , LEU H:210 , CYS H:277 , ILE H:278 , GLY H:279 , MET H:326 , LEU H:327 , VAL H:357 , TYR H:359 , FAD H:480 , HOH H:2051 , HOH H:2067 , HOH H:2086 , HOH H:2096 , HOH H:2110 , HOH H:2127 , HOH H:2166BINDING SITE FOR RESIDUE NAI H 481

(-) SS Bonds  (8, 8)

Asymmetric Unit
No.Residues
1A:45 -A:50
2B:45 -B:50
3C:45 -C:50
4D:45 -D:50
5E:45 -E:50
6F:45 -F:50
7G:45 -G:50
8H:45 -H:50

(-) Cis Peptide Bonds  (16, 16)

Asymmetric Unit
No.Residues
1His A:361 -Pro A:362
2His A:452 -Pro A:453
3His B:361 -Pro B:362
4His B:452 -Pro B:453
5His C:361 -Pro C:362
6His C:452 -Pro C:453
7His D:361 -Pro D:362
8His D:452 -Pro D:453
9His E:361 -Pro E:362
10His E:452 -Pro E:453
11His F:361 -Pro F:362
12His F:452 -Pro F:453
13His G:361 -Pro G:362
14His G:452 -Pro G:453
15His H:361 -Pro H:362
16His H:452 -Pro H:453

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (12, 96)

Asymmetric Unit (12, 96)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076985I47TDLDH_HUMANDisease (DLDD)397514651A/B/C/D/E/F/G/HI12T
02UniProtVAR_006907K72EDLDH_HUMANDisease (DLDD)121964987A/B/C/D/E/F/G/HK37E
03UniProtVAR_031922K104TDLDH_HUMANPolymorphism1130477A/B/C/D/E/F/G/HT69T
04UniProtVAR_015820G229CDLDH_HUMANDisease (DLDD)121964990A/B/C/D/E/F/G/HG194C
05UniProtVAR_014555L331VDLDH_HUMANPolymorphism17624A/B/C/D/E/F/G/HL296V
06UniProtVAR_076987M361VDLDH_HUMANDisease (DLDD)121964993A/B/C/D/E/F/G/HM326V
07UniProtVAR_076988E375KDLDH_HUMANDisease (DLDD)121964992A/B/C/D/E/F/G/HE340K
08UniProtVAR_076989I393TDLDH_HUMANDisease (DLDD)121964991A/B/C/D/E/F/G/HI358T
09UniProtVAR_076990D479VDLDH_HUMANDisease (DLDD)397514649A/B/C/D/E/F/G/HD444V
10UniProtVAR_076991R482GDLDH_HUMANDisease (DLDD)397514650A/B/C/D/E/F/G/HR447G
11UniProtVAR_006908P488LDLDH_HUMANDisease (DLDD)121964988A/B/C/D/E/F/G/HP453L
12UniProtVAR_015821R495GDLDH_HUMANDisease (DLDD)121964989A/B/C/D/E/F/G/HR460G

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (12, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076985I47TDLDH_HUMANDisease (DLDD)397514651A/BI12T
02UniProtVAR_006907K72EDLDH_HUMANDisease (DLDD)121964987A/BK37E
03UniProtVAR_031922K104TDLDH_HUMANPolymorphism1130477A/BT69T
04UniProtVAR_015820G229CDLDH_HUMANDisease (DLDD)121964990A/BG194C
05UniProtVAR_014555L331VDLDH_HUMANPolymorphism17624A/BL296V
06UniProtVAR_076987M361VDLDH_HUMANDisease (DLDD)121964993A/BM326V
07UniProtVAR_076988E375KDLDH_HUMANDisease (DLDD)121964992A/BE340K
08UniProtVAR_076989I393TDLDH_HUMANDisease (DLDD)121964991A/BI358T
09UniProtVAR_076990D479VDLDH_HUMANDisease (DLDD)397514649A/BD444V
10UniProtVAR_076991R482GDLDH_HUMANDisease (DLDD)397514650A/BR447G
11UniProtVAR_006908P488LDLDH_HUMANDisease (DLDD)121964988A/BP453L
12UniProtVAR_015821R495GDLDH_HUMANDisease (DLDD)121964989A/BR460G

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (12, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076985I47TDLDH_HUMANDisease (DLDD)397514651C/DI12T
02UniProtVAR_006907K72EDLDH_HUMANDisease (DLDD)121964987C/DK37E
03UniProtVAR_031922K104TDLDH_HUMANPolymorphism1130477C/DT69T
04UniProtVAR_015820G229CDLDH_HUMANDisease (DLDD)121964990C/DG194C
05UniProtVAR_014555L331VDLDH_HUMANPolymorphism17624C/DL296V
06UniProtVAR_076987M361VDLDH_HUMANDisease (DLDD)121964993C/DM326V
07UniProtVAR_076988E375KDLDH_HUMANDisease (DLDD)121964992C/DE340K
08UniProtVAR_076989I393TDLDH_HUMANDisease (DLDD)121964991C/DI358T
09UniProtVAR_076990D479VDLDH_HUMANDisease (DLDD)397514649C/DD444V
10UniProtVAR_076991R482GDLDH_HUMANDisease (DLDD)397514650C/DR447G
11UniProtVAR_006908P488LDLDH_HUMANDisease (DLDD)121964988C/DP453L
12UniProtVAR_015821R495GDLDH_HUMANDisease (DLDD)121964989C/DR460G

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (12, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076985I47TDLDH_HUMANDisease (DLDD)397514651E/FI12T
02UniProtVAR_006907K72EDLDH_HUMANDisease (DLDD)121964987E/FK37E
03UniProtVAR_031922K104TDLDH_HUMANPolymorphism1130477E/FT69T
04UniProtVAR_015820G229CDLDH_HUMANDisease (DLDD)121964990E/FG194C
05UniProtVAR_014555L331VDLDH_HUMANPolymorphism17624E/FL296V
06UniProtVAR_076987M361VDLDH_HUMANDisease (DLDD)121964993E/FM326V
07UniProtVAR_076988E375KDLDH_HUMANDisease (DLDD)121964992E/FE340K
08UniProtVAR_076989I393TDLDH_HUMANDisease (DLDD)121964991E/FI358T
09UniProtVAR_076990D479VDLDH_HUMANDisease (DLDD)397514649E/FD444V
10UniProtVAR_076991R482GDLDH_HUMANDisease (DLDD)397514650E/FR447G
11UniProtVAR_006908P488LDLDH_HUMANDisease (DLDD)121964988E/FP453L
12UniProtVAR_015821R495GDLDH_HUMANDisease (DLDD)121964989E/FR460G

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (12, 24)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_076985I47TDLDH_HUMANDisease (DLDD)397514651G/HI12T
02UniProtVAR_006907K72EDLDH_HUMANDisease (DLDD)121964987G/HK37E
03UniProtVAR_031922K104TDLDH_HUMANPolymorphism1130477G/HT69T
04UniProtVAR_015820G229CDLDH_HUMANDisease (DLDD)121964990G/HG194C
05UniProtVAR_014555L331VDLDH_HUMANPolymorphism17624G/HL296V
06UniProtVAR_076987M361VDLDH_HUMANDisease (DLDD)121964993G/HM326V
07UniProtVAR_076988E375KDLDH_HUMANDisease (DLDD)121964992G/HE340K
08UniProtVAR_076989I393TDLDH_HUMANDisease (DLDD)121964991G/HI358T
09UniProtVAR_076990D479VDLDH_HUMANDisease (DLDD)397514649G/HD444V
10UniProtVAR_076991R482GDLDH_HUMANDisease (DLDD)397514650G/HR447G
11UniProtVAR_006908P488LDLDH_HUMANDisease (DLDD)121964988G/HP453L
12UniProtVAR_015821R495GDLDH_HUMANDisease (DLDD)121964989G/HR460G

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 8)

Asymmetric Unit (1, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PYRIDINE_REDOX_1PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.DLDH_HUMAN77-87
 
 
 
 
 
 
 
  8A:42-52
B:42-52
C:42-52
D:42-52
E:42-52
F:42-52
G:42-52
H:42-52
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PYRIDINE_REDOX_1PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.DLDH_HUMAN77-87
 
 
 
 
 
 
 
  2A:42-52
B:42-52
-
-
-
-
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PYRIDINE_REDOX_1PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.DLDH_HUMAN77-87
 
 
 
 
 
 
 
  2-
-
C:42-52
D:42-52
-
-
-
-
Biological Unit 3 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PYRIDINE_REDOX_1PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.DLDH_HUMAN77-87
 
 
 
 
 
 
 
  2-
-
-
-
E:42-52
F:42-52
-
-
Biological Unit 4 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PYRIDINE_REDOX_1PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.DLDH_HUMAN77-87
 
 
 
 
 
 
 
  2-
-
-
-
-
-
G:42-52
H:42-52

(-) Exons   (13, 104)

Asymmetric Unit (13, 104)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002054021aENSE00001876887chr7:107531415-107531734320DLDH_HUMAN1-13130--
1.3aENST000002054023aENSE00000715773chr7:107533645-10753372379DLDH_HUMAN14-40278A:3-5
B:4-5
C:4-5
D:3-5
E:2-5
F:4-5
G:3-5
H:4-5
3
2
2
3
4
2
3
2
1.4ENST000002054024ENSE00000715774chr7:107542183-10754226280DLDH_HUMAN40-66278A:5-31
B:5-31
C:5-31
D:5-31
E:5-31
F:5-31
G:5-31
H:5-31
27
27
27
27
27
27
27
27
1.5ENST000002054025ENSE00000715776chr7:107542770-10754283869DLDH_HUMAN67-89238A:32-54
B:32-54
C:32-54
D:32-54
E:32-54
F:32-54
G:32-54
H:32-54
23
23
23
23
23
23
23
23
1.6aENST000002054026aENSE00001665843chr7:107543923-10754399270DLDH_HUMAN90-113248A:55-78
B:55-78
C:55-78
D:55-78
E:55-78
F:55-78
G:55-78
H:55-78
24
24
24
24
24
24
24
24
1.7eENST000002054027eENSE00001717474chr7:107545403-107545503101DLDH_HUMAN113-146348A:78-111
B:78-111
C:78-111
D:78-111
E:78-111
F:78-111
G:78-111
H:78-111
34
34
34
34
34
34
34
34
1.8bENST000002054028bENSE00001761545chr7:107545806-107545949144DLDH_HUMAN147-194488A:112-159
B:112-159
C:112-159
D:112-159
E:112-159
F:112-159
G:112-159
H:112-159
48
48
48
48
48
48
48
48
1.9aENST000002054029aENSE00001638968chr7:107546712-107546813102DLDH_HUMAN195-228348A:160-193
B:160-193
C:160-193
D:160-193
E:160-193
F:160-193
G:160-193
H:160-193
34
34
34
34
34
34
34
34
1.10bENST0000020540210bENSE00001672433chr7:107555951-107556141191DLDH_HUMAN229-292648A:194-257
B:194-257
C:194-257
D:194-257
E:194-257
F:194-257
G:194-257
H:194-257
64
64
64
64
64
64
64
64
1.11ENST0000020540211ENSE00001609201chr7:107557239-107557409171DLDH_HUMAN292-349588A:257-314
B:257-314
C:257-314
D:257-314
E:257-314
F:257-314
G:257-314
H:257-314
58
58
58
58
58
58
58
58
1.12ENST0000020540212ENSE00001752704chr7:107557718-107557907190DLDH_HUMAN349-412648A:314-377
B:314-377
C:314-377
D:314-377
E:314-377
F:314-377
G:314-377
H:314-377
64
64
64
64
64
64
64
64
1.13ENST0000020540213ENSE00001658920chr7:107558369-107558506138DLDH_HUMAN413-458468A:378-423
B:378-423
C:378-423
D:378-423
E:378-423
F:378-423
G:378-423
H:378-423
46
46
46
46
46
46
46
46
1.14ENST0000020540214ENSE00001606668chr7:107559455-10755954490DLDH_HUMAN459-488308A:424-453
B:424-453
C:424-453
D:424-453
E:424-453
F:424-453
G:424-453
H:424-453
30
30
30
30
30
30
30
30
1.15eENST0000020540215eENSE00000881778chr7:107559639-107560360722DLDH_HUMAN489-509218A:454-474
B:454-474
C:454-474
D:454-474
E:454-474
F:454-474
G:454-474
H:454-474
21
21
21
21
21
21
21
21

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:472
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:472
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507  
           DLDH_HUMAN    38 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdA01 A:3-152,A:279-350  [code=3.50.50.60, no name defined]                                                                                         1zmdA02 A:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdA01 A:3-152,A:279-350  [code=3.50.50.60, no name defined]           1zmdA03 A:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee..hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee..eeehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeeeee..eeeee.....eeeeeeeeeee...eee............eehhhhhh.......eeeee..hhhhhhhhhhhhhh..eeeee...........hhhhhhhhhhhhhhh..eee..eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhh......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE ---------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.3--------------------------Exon 1.5  PDB: A:32-54 Exon 1.6a  PDB: A:55-78 ---------------------------------Exon 1.8b  PDB: A:112-159 UniProt: 147-194      Exon 1.9a  PDB: A:160-193         Exon 1.10b  PDB: A:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: A:314-377 UniProt: 349-412                      Exon 1.13  PDB: A:378-423 UniProt: 413-458    Exon 1.14  PDB: A:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) --Exon 1.4  PDB: A:5-31      ----------------------------------------------Exon 1.7e  PDB: A:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: A:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd A   3 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472  

Chain B from PDB  Type:PROTEIN  Length:471
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:471
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508 
           DLDH_HUMAN    39 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdB01 B:4-152,B:279-350  [code=3.50.50.60, no name defined]                                                                                        1zmdB02 B:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdB01 B:4-152,B:279-350  [code=3.50.50.60, no name defined]           1zmdB03 B:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee..eeehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeee....eeeee.......eeeeeeeee...eee............eehhhhhh.......eeeee..hhhhhhhhhhhhhh..eeeee...........hhhhhhhhhhhhhhhh.eee..eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhh......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE --------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.--------------------------Exon 1.5  PDB: B:32-54 Exon 1.6a  PDB: B:55-78 ---------------------------------Exon 1.8b  PDB: B:112-159 UniProt: 147-194      Exon 1.9a  PDB: B:160-193         Exon 1.10b  PDB: B:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: B:314-377 UniProt: 349-412                      Exon 1.13  PDB: B:378-423 UniProt: 413-458    Exon 1.14  PDB: B:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) -Exon 1.4  PDB: B:5-31      ----------------------------------------------Exon 1.7e  PDB: B:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: B:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd B   4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473 

Chain C from PDB  Type:PROTEIN  Length:471
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:471
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508 
           DLDH_HUMAN    39 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdC01 C:4-152,C:279-350  [code=3.50.50.60, no name defined]                                                                                        1zmdC02 C:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdC01 C:4-152,C:279-350  [code=3.50.50.60, no name defined]           1zmdC03 C:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee..eeehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeeeee..eeeee.......eeeeeeeee...eee............eehhhhhh.......eeeee..hhhhhhhhhhhhhhh.eeeee...........hhhhhhhhhhhhhhhh.eee..eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhh......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE --------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.--------------------------Exon 1.5  PDB: C:32-54 Exon 1.6a  PDB: C:55-78 ---------------------------------Exon 1.8b  PDB: C:112-159 UniProt: 147-194      Exon 1.9a  PDB: C:160-193         Exon 1.10b  PDB: C:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: C:314-377 UniProt: 349-412                      Exon 1.13  PDB: C:378-423 UniProt: 413-458    Exon 1.14  PDB: C:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) -Exon 1.4  PDB: C:5-31      ----------------------------------------------Exon 1.7e  PDB: C:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: C:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd C   4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473 

Chain D from PDB  Type:PROTEIN  Length:472
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:472
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507  
           DLDH_HUMAN    38 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdD01 D:3-152,D:279-350  [code=3.50.50.60, no name defined]                                                                                         1zmdD02 D:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdD01 D:3-152,D:279-350  [code=3.50.50.60, no name defined]           1zmdD03 D:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee..hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee..eeehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeeeee..eeeee.....eeeeeeeeeee...eee............eehhhhhhh......eeeee..hhhhhhhhhhhhhh..eeeeee..........hhhhhhhhhhhhhhh..eeee.eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhhh....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhh.......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE ---------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.3--------------------------Exon 1.5  PDB: D:32-54 Exon 1.6a  PDB: D:55-78 ---------------------------------Exon 1.8b  PDB: D:112-159 UniProt: 147-194      Exon 1.9a  PDB: D:160-193         Exon 1.10b  PDB: D:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: D:314-377 UniProt: 349-412                      Exon 1.13  PDB: D:378-423 UniProt: 413-458    Exon 1.14  PDB: D:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) --Exon 1.4  PDB: D:5-31      ----------------------------------------------Exon 1.7e  PDB: D:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: D:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd D   3 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472  

Chain E from PDB  Type:PROTEIN  Length:473
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:473
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506   
           DLDH_HUMAN    37 DQPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdE01 E:2-152,E:279-350  [code=3.50.50.60, no name defined]                                                                                          1zmdE02 E:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdE01 E:2-152,E:279-350  [code=3.50.50.60, no name defined]           1zmdE03 E:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.ee...eeehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeeeee..eeeee.....eeeeeeeeeee...eee............eehhhhhh.......eeeee..hhhhhhhhhhhhhh..eeeee...........hhhhhhhhhhhhhhhh.eee..eeeeeeee.....eeeeeee......eeeee.eeee...eee................................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhhh....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhhh......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE ----------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.3a--------------------------Exon 1.5  PDB: E:32-54 Exon 1.6a  PDB: E:55-78 ---------------------------------Exon 1.8b  PDB: E:112-159 UniProt: 147-194      Exon 1.9a  PDB: E:160-193         Exon 1.10b  PDB: E:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: E:314-377 UniProt: 349-412                      Exon 1.13  PDB: E:378-423 UniProt: 413-458    Exon 1.14  PDB: E:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.4  PDB: E:5-31      ----------------------------------------------Exon 1.7e  PDB: E:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: E:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd E   2 DQPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471   

Chain F from PDB  Type:PROTEIN  Length:471
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:471
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508 
           DLDH_HUMAN    39 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdF01 F:4-152,F:279-350  [code=3.50.50.60, no name defined]                                                                                        1zmdF02 F:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdF01 F:4-152,F:279-350  [code=3.50.50.60, no name defined]           1zmdF03 F:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee...eehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeeeee..eeeee.....eeeeeeeeeee...eee............eehhhhhhh......eeeee..hhhhhhhhhhhhhh..eeeeee..........hhhhhhhhhhhhhhhh.eeee.eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhh.....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhh......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE --------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.--------------------------Exon 1.5  PDB: F:32-54 Exon 1.6a  PDB: F:55-78 ---------------------------------Exon 1.8b  PDB: F:112-159 UniProt: 147-194      Exon 1.9a  PDB: F:160-193         Exon 1.10b  PDB: F:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: F:314-377 UniProt: 349-412                      Exon 1.13  PDB: F:378-423 UniProt: 413-458    Exon 1.14  PDB: F:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) -Exon 1.4  PDB: F:5-31      ----------------------------------------------Exon 1.7e  PDB: F:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: F:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd F   4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473 

Chain G from PDB  Type:PROTEIN  Length:472
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:472
                                    47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507  
           DLDH_HUMAN    38 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdG01 G:3-152,G:279-350  [code=3.50.50.60, no name defined]                                                                                         1zmdG02 G:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdG01 G:3-152,G:279-350  [code=3.50.50.60, no name defined]           1zmdG03 G:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee..hhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee..eeehhhhhhhhhhhhhhhhhhhhhhhhhhh..eeee.eeeeee..eeeee.....eeeeeeeeeee...eee............eehhhhhh.......eeeee..hhhhhhhhhhhhhhh.eeeeee..........hhhhhhhhhhhhhhhh.eeee.eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhhh..eeeeeee...hhhhhhhh....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh.hhhhhhhh......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE ---------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.3--------------------------Exon 1.5  PDB: G:32-54 Exon 1.6a  PDB: G:55-78 ---------------------------------Exon 1.8b  PDB: G:112-159 UniProt: 147-194      Exon 1.9a  PDB: G:160-193         Exon 1.10b  PDB: G:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: G:314-377 UniProt: 349-412                      Exon 1.13  PDB: G:378-423 UniProt: 413-458    Exon 1.14  PDB: G:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) --Exon 1.4  PDB: G:5-31      ----------------------------------------------Exon 1.7e  PDB: G:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: G:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd G   3 QPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472  

Chain H from PDB  Type:PROTEIN  Length:471
 aligned with DLDH_HUMAN | P09622 from UniProtKB/Swiss-Prot  Length:509

    Alignment length:471
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508 
           DLDH_HUMAN    39 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 509
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 1zmdH01 H:4-152,H:279-350  [code=3.50.50.60, no name defined]                                                                                        1zmdH02 H:153-278  [code=3.50.50.60, no name defined]                                                                         1zmdH01 H:4-152,H:279-350  [code=3.50.50.60, no name defined]           1zmdH03 H:351-474  [code=3.30.390.30, no name defined]                                                                       CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee..eeehhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee.eeeeee..eeeee.....eeeeeeeeeee...eee............eehhhhhh.......eeeee..hhhhhhhhhhhhhh..eeeee...........hhhhhhhhhhhhhhhh.eee..eeeeeeee.....eeeeeee......eeeee.eeee...eee.....hhhhhh.....................eee.hhhh....hhhhhhhhhhhhhhhhh......hhhhh.eee....eeeeee.hhhhhhhh...eeeeeee...hhhhhhhh....eeeeeee.....eeeeeeee.hhhhhhhhhhhhhhh..hhhhhhh.......hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------T------------------------E-------------------------------T----------------------------------------------------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------V-----------------------------V-------------K-----------------T-------------------------------------------------------------------------------------V--G-----L------G-------------- SAPs(SNPs)
                    PROSITE --------------------------------------PYRIDINE_RE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) 1.--------------------------Exon 1.5  PDB: H:32-54 Exon 1.6a  PDB: H:55-78 ---------------------------------Exon 1.8b  PDB: H:112-159 UniProt: 147-194      Exon 1.9a  PDB: H:160-193         Exon 1.10b  PDB: H:194-257 UniProt: 229-292                     --------------------------------------------------------Exon 1.12  PDB: H:314-377 UniProt: 349-412                      Exon 1.13  PDB: H:378-423 UniProt: 413-458    Exon 1.14  PDB: H:424-453     Exon 1.15e            Transcript 1 (1)
           Transcript 1 (2) -Exon 1.4  PDB: H:5-31      ----------------------------------------------Exon 1.7e  PDB: H:78-111          -------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.11  PDB: H:257-314 UniProt: 292-349                ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1zmd H   4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF 474
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1ZMD)

(-) CATH Domains  (2, 24)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
1a1zmdA03A:351-474
1b1zmdB03B:351-474
1c1zmdC03C:351-474
1d1zmdD03D:351-474
1e1zmdE03E:351-474
1f1zmdF03F:351-474
1g1zmdG03G:351-474
1h1zmdH03H:351-474
2a1zmdB01B:4-152,B:279-350
2b1zmdA02A:153-278
2c1zmdB02B:153-278
2d1zmdC02C:153-278
2e1zmdD02D:153-278
2f1zmdE02E:153-278
2g1zmdF02F:153-278
2h1zmdG02G:153-278
2i1zmdH02H:153-278
2j1zmdC01C:4-152,C:279-350
2k1zmdF01F:4-152,F:279-350
2l1zmdH01H:4-152,H:279-350
2m1zmdA01A:3-152,A:279-350
2n1zmdD01D:3-152,D:279-350
2o1zmdG01G:3-152,G:279-350
2p1zmdE01E:2-152,E:279-350

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1ZMD)

(-) Gene Ontology  (34, 34)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (DLDH_HUMAN | P09622)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0004148    dihydrolipoyl dehydrogenase activity    Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0043544    lipoamide binding    Interacting selectively and non-covalently with lipoamide, the functional form of lipoic acid in which the carboxyl group is attached to protein by an amide linkage to a lysine amino group.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016668    oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.
    GO:0034604    pyruvate dehydrogenase (NAD+) activity    Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.
biological process
    GO:0006103    2-oxoglutarate metabolic process    The chemical reactions and pathways involving oxoglutarate, the dianion of 2-oxoglutaric acid. It is a key constituent of the TCA cycle and a key intermediate in amino-acid metabolism.
    GO:0006086    acetyl-CoA biosynthetic process from pyruvate    The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.
    GO:0007568    aging    A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
    GO:0009083    branched-chain amino acid catabolic process    The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
    GO:0045454    cell redox homeostasis    Any process that maintains the redox environment of a cell or compartment within a cell.
    GO:0051068    dihydrolipoamide metabolic process    The chemical reactions and pathways involving dihydrolipoamide, the reduced form of lipoamide, produced as an intermediate in the reactions in which lipoamide acts as a cofactor.
    GO:0007369    gastrulation    A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.
    GO:0046487    glyoxylate metabolic process    The chemical reactions and pathways involving glyoxylate, the anion of glyoxylic acid, HOC-COOH.
    GO:0009106    lipoate metabolic process    The chemical reactions and pathways involving lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid.
    GO:0006554    lysine catabolic process    The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid.
    GO:0061732    mitochondrial acetyl-CoA biosynthetic process from pyruvate    The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate in the mitochondrion. The process begins with the transport of pyruvate from the cytosol to the mitochondrion where it is subsequently decarboxylated to form acetyl-CoA.
    GO:0006120    mitochondrial electron transport, NADH to ubiquinone    The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0006090    pyruvate metabolic process    The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.
    GO:0010510    regulation of acetyl-CoA biosynthetic process from pyruvate    Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate.
    GO:0042391    regulation of membrane potential    Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.
    GO:0048240    sperm capacitation    A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium.
    GO:0006099    tricarboxylic acid cycle    A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
cellular component
    GO:0043159    acrosomal matrix    A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction.
    GO:0005929    cilium    A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.
    GO:0005759    mitochondrial matrix    The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0043209    myelin sheath    An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0045252    oxoglutarate dehydrogenase complex    A complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) ; EC:1.2.4.2 (E1), dihydrolipoamide S-succinyltransferase ; EC:2.3.1.61 (E2) and dihydrolipoamide dehydrogenase ; EC:1.8.1.4 (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).
    GO:0045254    pyruvate dehydrogenase complex    Complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        DLDH_HUMAN | P096221zmc 1zy8 2f5z 3rnm

(-) Related Entries Specified in the PDB File

1zmc CRYSTAL STRUCTURE OF THE SAME PROTEIN IN COMPLEX WITH NAD+