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(-) Description

Title :  SULFOLOBUS SOLFATARICUS SWI2/SNF2 ATPASE C-TERMINAL DOMAIN
 
Authors :  H. Duerr, C. Koerner, M. Mueller, V. Hickmann, K. P. Hopfner
Date :  21 Mar 05  (Deposition) - 03 May 05  (Release) - 16 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Hydrolase, Recombination, Hydrolase-Recombination Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Duerr, C. Koerner, M. Mueller, V. Hickmann, K. P. Hopfner
X-Ray Structures Of The Sulfolobus Solfataricus Swi2/Snf2 Atpase Core And Its Complex With Dna
Cell(Cambridge, Mass. ) V. 121 363 2005
PubMed-ID: 15882619  |  Reference-DOI: 10.1016/J.CELL.2005.03.026

(-) Compounds

Molecule 1 - HELICASE OF THE SNF2/RAD54 FAMILY
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: RESIDUES 659-789, 790-906
    Organism Scientific: SULFOLOBUS SOLFATARICUS
    Organism Taxid: 273057
    Strain: P2

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1Z5Z)

(-) Sites  (0, 0)

(no "Site" information available for 1Z5Z)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1Z5Z)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1Z5Z)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1Z5Z)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1Z5Z)

(-) Exons   (0, 0)

(no "Exon" information available for 1Z5Z)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:230
 aligned with Q97XQ5_SULSO | Q97XQ5 from UniProtKB/TrEMBL  Length:124

    Alignment length:244
                                                                                                   1   5                                                 6                                                                                                                      
                                     -         -         -         -         -         -         - |   |   -         -         -         -         -     |  10        20        30        40        50        60        70        80        90       100       110       120    
         Q97XQ5_SULSO     - -----------------------------------------------------------------------MRTLP-------------------------------------------------DDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSGDSWITELSTEELRKVIELSVGGY 124
               SCOP domains d1z5za1 A:663-906 Helicase of the SNF2/Rad54 hamily                                                                                                                                                                                                  SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee..hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh..hhhhhh.......hhhhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhhhh....ee....hhhhhhhhhhhhhhh....eeeee..............eeee..........--------------..eeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1z5z A 663 KIETNVYCNLTPEQAAMYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLKGGEQSVRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVE--------------NVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSGDSWITELSTEELRKVIELSVGGY 906
                                   672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832 |       -      |852       862       872       882       892       902    
                                                                                                                                                                                                     834            849                                                         


Chain B from PDB  Type:PROTEIN  Length:228
 aligned with Q97XQ5_SULSO | Q97XQ5 from UniProtKB/TrEMBL  Length:124

    Alignment length:242
                                                                                                    1   5                                                 6                                                                                                                   
                                     -         -         -         -         -         -         -  |   |  -         -         -         -         -      |  9        19        29        39        49        59        69        79        89        99       109       119  
         Q97XQ5_SULSO     - ------------------------------------------------------------------------MRTLP-------------------------------------------------DDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSGDSWITELSTEELRKVIELSV 121
               SCOP domains d1z5zb_ B: Helicase of the SNF2/Rad54 hamily                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------------------------------------------------------------------------------------------------------------------------------Helicase_C-1z5zB01 B:788-834                   --------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------------------------------------------------------------------------------------Helicase_C-1z5zB02 B:788-834                   --------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author .eeeeeeee..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh..hhhhhh...hhhhhhhhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhhhh....ee....hhhhhhhhhhhhhhh....eeeee..............eeee..........--------------.eeeeeeee..hhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1z5z B 662 DKIETNVYCNLTPEQAAMYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLKGGEQSVRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVE--------------NVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISSGDSWITELSTEELRKVIELSV 903
                                   671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831  |      -       851       861       871       881       891       901  
                                                                                                                                                                                                      834            849
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1Z5Z)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: P-loop_NTPase (1112)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (Q97XQ5_SULSO | Q97XQ5)
molecular function
    GO:0004386    helicase activity    Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q97XQ5_SULSO | Q97XQ5: 1z63 1z6a

(-) Related Entries Specified in the PDB File

1z63 SWI2/SNF2 ATPASE CORE IN COMPLEX WITH DSDNA
1z6a SWI2/SNF2 ATPASE CORE DOMAIN